RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 TMEM158Q8WZ71 300 aa16.43■□□□□ 0.22
NPHP4-206ENST00000468253 LHX4Q969G2 390 aa16.43■□□□□ 0.22
NPHP4-206ENST00000468253 SLC6A7Q99884 636 aa16.43■□□□□ 0.22
NPHP4-206ENST00000468253 ST3GAL6Q9Y274 331 aa16.43■□□□□ 0.22
NPHP4-206ENST00000468253 C17orf98A8MV24 154 aa16.42■□□□□ 0.22
NPHP4-206ENST00000468253 SIRPB1O00241 398 aa16.42■□□□□ 0.22
NPHP4-206ENST00000468253 SLC33A1O00400 549 aaPredicted RBP16.42■□□□□ 0.22
NPHP4-206ENST00000468253 ZNF728P0DKX0 622 aa16.42■□□□□ 0.22
NPHP4-206ENST00000468253 RANBP1P43487 201 aa16.42■□□□□ 0.22
NPHP4-206ENST00000468253 PSMD7P51665 324 aa16.42■□□□□ 0.22
NPHP4-206ENST00000468253 UBE2E1P51965 193 aa16.42■□□□□ 0.22
NPHP4-206ENST00000468253 SNU13P55769 128 aaKnown RBP16.42■□□□□ 0.22
NPHP4-206ENST00000468253 SCN1BQ07699 218 aa16.42■□□□□ 0.22
NPHP4-206ENST00000468253 SSX1Q16384 188 aa16.42■□□□□ 0.22
NPHP4-206ENST00000468253 CD200R1LQ6Q8B3 271 aa16.42■□□□□ 0.22
NPHP4-206ENST00000468253 GLIPR1L1Q6UWM5 242 aa16.42■□□□□ 0.22
NPHP4-206ENST00000468253 BCL6BQ8N143 479 aaPredicted RBP16.42■□□□□ 0.22
NPHP4-206ENST00000468253 OR10K1Q8NGX5 313 aa16.42■□□□□ 0.22
NPHP4-206ENST00000468253 CORO2AQ92828 525 aa16.42■□□□□ 0.22
NPHP4-206ENST00000468253 MUL1Q969V5 352 aa16.42■□□□□ 0.22
NPHP4-206ENST00000468253 NR1H4Q96RI1 486 aaPredicted RBP16.42■□□□□ 0.22
NPHP4-206ENST00000468253 HEXA-AS1Q9H8Q6 139 aa16.42■□□□□ 0.22
NPHP4-206ENST00000468253 NDUFB11Q9NX14 153 aa16.42■□□□□ 0.22
NPHP4-206ENST00000468253 MRPS28Q9Y2Q9 187 aaKnown RBP16.42■□□□□ 0.22
NPHP4-206ENST00000468253 LINC00312Q9Y6C7 94 aa16.42■□□□□ 0.22
NPHP4-206ENST00000468253 H3BUI4 141 aa16.41■□□□□ 0.22
NPHP4-206ENST00000468253 UBBP0CG47 229 aa16.41■□□□□ 0.22
NPHP4-206ENST00000468253 KCNJ3P48549 501 aa16.41■□□□□ 0.22
NPHP4-206ENST00000468253 DLX6P56179 175 aa16.41■□□□□ 0.22
NPHP4-206ENST00000468253 P2RX3P56373 397 aa16.41■□□□□ 0.22
NPHP4-206ENST00000468253 EDDM3BP56851 147 aa16.41■□□□□ 0.22
NPHP4-206ENST00000468253 RBM11P57052 281 aaKnown RBP16.41■□□□□ 0.22
NPHP4-206ENST00000468253 FABP5Q01469 135 aa16.41■□□□□ 0.22
NPHP4-206ENST00000468253 PAX5Q02548 391 aa16.41■□□□□ 0.22
NPHP4-206ENST00000468253 MPV17LQ2QL34 196 aa16.41■□□□□ 0.22
NPHP4-206ENST00000468253 SLC22A6Q4U2R8 563 aa16.41■□□□□ 0.22
NPHP4-206ENST00000468253 OR4D6Q8NGJ1 314 aa16.41■□□□□ 0.22
NPHP4-206ENST00000468253 C22orf15Q8WYQ4 148 aa16.41■□□□□ 0.22
NPHP4-206ENST00000468253 C1orf147Q96MC9 270 aaPredicted RBP16.41■□□□□ 0.22
NPHP4-206ENST00000468253 CHST6Q9GZX3 395 aa16.41■□□□□ 0.22
NPHP4-206ENST00000468253 UBE2J1Q9Y385 318 aaPredicted RBP16.41■□□□□ 0.22
NPHP4-206ENST00000468253 IGHV3OR16-10A0A075B7F0 116 aa16.4■□□□□ 0.22
NPHP4-206ENST00000468253 TRAV24A0A0B4J272 114 aa16.4■□□□□ 0.22
NPHP4-206ENST00000468253 TRDV1A0A1B0GX56 115 aa16.4■□□□□ 0.22
NPHP4-206ENST00000468253 RNASEK-C17orf49H0YIS7 233 aa16.4■□□□□ 0.22
NPHP4-206ENST00000468253 CCRL2O00421 344 aa16.4■□□□□ 0.22
NPHP4-206ENST00000468253 VENTXO95231 258 aa16.4■□□□□ 0.22
NPHP4-206ENST00000468253 NKX3-1Q99801 234 aaPredicted RBP16.4■□□□□ 0.22
NPHP4-206ENST00000468253 BARHL1Q9BZE3 327 aa16.4■□□□□ 0.22
NPHP4-206ENST00000468253 FAM90A10PA6NDY2 464 aa16.39■□□□□ 0.21
NPHP4-206ENST00000468253 FAM90A18PA6NE21 464 aa16.39■□□□□ 0.21
NPHP4-206ENST00000468253 FAM90A16PA6NEW6 464 aa16.39■□□□□ 0.21
NPHP4-206ENST00000468253 FAM90A20PA6NIJ5 464 aa16.39■□□□□ 0.21
NPHP4-206ENST00000468253 FAM90A8PA6NJQ4 464 aa16.39■□□□□ 0.21
NPHP4-206ENST00000468253 FAM90A7PA6NKC0 464 aa16.39■□□□□ 0.21
NPHP4-206ENST00000468253 FAM90A22PA8MWA6 464 aa16.39■□□□□ 0.21
NPHP4-206ENST00000468253 FAM90A12PA8MX19 464 aa16.39■□□□□ 0.21
NPHP4-206ENST00000468253 FAM90A5PA8MXJ8 464 aa16.39■□□□□ 0.21
NPHP4-206ENST00000468253 FAM90A23PA8MXZ1 464 aa16.39■□□□□ 0.21
NPHP4-206ENST00000468253 FAM90A15PP0C7V4 464 aa16.39■□□□□ 0.21
NPHP4-206ENST00000468253 FAM90A13PP0C7W8 464 aa16.39■□□□□ 0.21
NPHP4-206ENST00000468253 FAM90A14PP0C7W9 464 aa16.39■□□□□ 0.21
NPHP4-206ENST00000468253 FAM90A24PP0C7X0 464 aa16.39■□□□□ 0.21
NPHP4-206ENST00000468253 SERPINA2P20848 420 aa16.39■□□□□ 0.21
NPHP4-206ENST00000468253 ZNF273Q14593 569 aa16.39■□□□□ 0.21
NPHP4-206ENST00000468253 PIGYQ3MUY2 71 aa16.39■□□□□ 0.21
NPHP4-206ENST00000468253 SYT6Q5T7P8 510 aaPredicted RBP16.39■□□□□ 0.21
NPHP4-206ENST00000468253 AWAT2Q6E213 333 aa16.39■□□□□ 0.21
NPHP4-206ENST00000468253 BRD3OSQ6XYD6 125 aa16.39■□□□□ 0.21
NPHP4-206ENST00000468253 SIGLECL1Q8N7X8 197 aa16.39■□□□□ 0.21
NPHP4-206ENST00000468253 SPACA1Q9HBV2 294 aa16.39■□□□□ 0.21
NPHP4-206ENST00000468253 SIRT7Q9NRC8 400 aa16.39■□□□□ 0.21
NPHP4-206ENST00000468253 TAS2R3Q9NYW6 316 aa16.39■□□□□ 0.21
NPHP4-206ENST00000468253 TRAV1-2A0A0B4J238 106 aa16.38■□□□□ 0.21
NPHP4-206ENST00000468253 CLDN34H7C241 214 aa16.38■□□□□ 0.21
NPHP4-206ENST00000468253 SLC22A1O15245 554 aa16.38■□□□□ 0.21
NPHP4-206ENST00000468253 GLAP06280 429 aa16.38■□□□□ 0.21
NPHP4-206ENST00000468253 ERVFRD-1P60508 538 aa16.38■□□□□ 0.21
NPHP4-206ENST00000468253 AESQ08117 197 aa16.38■□□□□ 0.21
NPHP4-206ENST00000468253 EDDM3AQ14507 147 aa16.38■□□□□ 0.21
NPHP4-206ENST00000468253 PAN3Q58A45 887 aaKnown RBP16.38■□□□□ 0.21
NPHP4-206ENST00000468253 ZNF48Q96MX3 618 aaPredicted RBP16.38■□□□□ 0.21
NPHP4-206ENST00000468253 ZNF714Q96N38 554 aa16.38■□□□□ 0.21
NPHP4-206ENST00000468253 PPA2Q9H2U2 334 aa16.38■□□□□ 0.21
NPHP4-206ENST00000468253 ZMAT3Q9HA38 289 aaKnown RBP16.38■□□□□ 0.21
NPHP4-206ENST00000468253 TRGV10A0A0A0MS01 117 aa16.37■□□□□ 0.21
NPHP4-206ENST00000468253 TRIM77I1YAP6 450 aa16.37■□□□□ 0.21
NPHP4-206ENST00000468253 GEMIN2O14893 280 aaKnown RBP16.37■□□□□ 0.21
NPHP4-206ENST00000468253 TNFAIP8O95379 198 aa16.37■□□□□ 0.21
NPHP4-206ENST00000468253 CCL3L1P16619 93 aa16.37■□□□□ 0.21
NPHP4-206ENST00000468253 CALRP27797 417 aaKnown RBP16.37■□□□□ 0.21
NPHP4-206ENST00000468253 PSMB9P28065 219 aa16.37■□□□□ 0.21
NPHP4-206ENST00000468253 DEFB112Q30KQ8 113 aa16.37■□□□□ 0.21
NPHP4-206ENST00000468253 MIDNQ504T8 468 aa16.37■□□□□ 0.21
NPHP4-206ENST00000468253 KRBOX4Q5JUW0 171 aa16.37■□□□□ 0.21
NPHP4-206ENST00000468253 HCP5Q6MZN7 132 aa16.37■□□□□ 0.21
NPHP4-206ENST00000468253 PIP4P2Q8N4L2 257 aa16.37■□□□□ 0.21
NPHP4-206ENST00000468253 ZDHHC22Q8N966 263 aa16.37■□□□□ 0.21
NPHP4-206ENST00000468253 ZNF565Q8N9K5 539 aa16.37■□□□□ 0.21
NPHP4-206ENST00000468253 OR6M1Q8NGM8 313 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms