RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 DUX4L3P0CJ86 424 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 DUX4L4P0CJ87 422 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 DUX4L5P0CJ88 424 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 DUX4L6P0CJ89 424 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 DUX4L7P0CJ90 424 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 ZNF44P15621 663 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 IL2RGP31785 369 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 KCNJ3P48549 501 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 EFNB2P52799 333 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 PAX5Q02548 391 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 PLA2G7Q13093 441 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 ESCO2Q56NI9 601 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 WDR25Q64LD2 544 aaPredicted RBP9.62□□□□□ -0.87
SCN9A-204ENST00000452182 DUX4L9Q6RFH8 374 aaPredicted RBP9.62□□□□□ -0.87
SCN9A-204ENST00000452182 C17orf107Q6ZR85 190 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 OR8H2Q8N162 312 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 OR56B1Q8NGI3 324 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 OR5D13Q8NGL4 314 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 SLIRPQ9GZT3 109 aaKnown RBP9.62□□□□□ -0.87
SCN9A-204ENST00000452182 RHBDL2Q9NX52 303 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 DUX4Q9UBX2 424 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 SLC25A10Q9UBX3 287 aaPredicted RBP9.62□□□□□ -0.87
SCN9A-204ENST00000452182 CLN8Q9UBY8 286 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 POLR3KQ9Y2Y1 108 aaPredicted RBP9.62□□□□□ -0.87
SCN9A-204ENST00000452182 DOCK11Q5JSL3 2073 aa9.61□□□□□ -0.87
SCN9A-204ENST00000452182 A0A075B6Q4 140 aa9.61□□□□□ -0.87
SCN9A-204ENST00000452182 A0A0A6YYD4 124 aa9.61□□□□□ -0.87
SCN9A-204ENST00000452182 SIRPB1O00241 398 aa9.61□□□□□ -0.87
SCN9A-204ENST00000452182 PDCD6O75340 191 aa9.61□□□□□ -0.87
SCN9A-204ENST00000452182 FOXH1O75593 365 aa9.61□□□□□ -0.87
SCN9A-204ENST00000452182 FCN3O75636 299 aa9.61□□□□□ -0.87
SCN9A-204ENST00000452182 FUT3P21217 361 aa9.61□□□□□ -0.87
SCN9A-204ENST00000452182 GABRR1P24046 479 aa9.61□□□□□ -0.87
SCN9A-204ENST00000452182 SEC61A1P61619 476 aaKnown RBP9.61□□□□□ -0.87
SCN9A-204ENST00000452182 GNB2P62879 340 aa9.61□□□□□ -0.87
SCN9A-204ENST00000452182 SCN1BQ07699 218 aa9.61□□□□□ -0.87
SCN9A-204ENST00000452182 SIGIRRQ6IA17 410 aa9.61□□□□□ -0.87
SCN9A-204ENST00000452182 MZT2AQ6P582 158 aa9.61□□□□□ -0.87
SCN9A-204ENST00000452182 ASCC1Q8N9N2 400 aaKnown RBP9.61□□□□□ -0.87
SCN9A-204ENST00000452182 OR5H6Q8NGV6 325 aa9.61□□□□□ -0.87
SCN9A-204ENST00000452182 SLC25A38Q96DW6 304 aa9.61□□□□□ -0.87
SCN9A-204ENST00000452182 COX4I2Q96KJ9 171 aa9.61□□□□□ -0.87
SCN9A-204ENST00000452182 NUDT16L1Q9BRJ7 211 aaKnown RBP9.61□□□□□ -0.87
SCN9A-204ENST00000452182 NICN1Q9BSH3 213 aa9.61□□□□□ -0.87
SCN9A-204ENST00000452182 SSBP3Q9BWW4 388 aaPredicted RBP9.61□□□□□ -0.87
SCN9A-204ENST00000452182 ABCG5Q9H222 651 aa9.61□□□□□ -0.87
SCN9A-204ENST00000452182 HSF4Q9ULV5 492 aa9.61□□□□□ -0.87
SCN9A-204ENST00000452182 A0A0A6YYH2 397 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 A6NJ64 397 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 B4DSR2 109 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 H7C1Q1 480 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 RAB27BO00194 218 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 MGST3O14880 152 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 ECDO95905 644 aaPredicted RBP9.6□□□□□ -0.87
SCN9A-204ENST00000452182 SELLP14151 372 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 CHATP28329 748 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 ERP29P30040 261 aaKnown RBP9.6□□□□□ -0.87
SCN9A-204ENST00000452182 OR3A1P47881 315 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 VEGFCP49767 419 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 RBM39Q14498 530 aaKnown RBP9.6□□□□□ -0.87
SCN9A-204ENST00000452182 PDCD1Q15116 288 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 TMEM249Q2WGJ8 235 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 PAN3Q58A45 887 aaKnown RBP9.6□□□□□ -0.87
SCN9A-204ENST00000452182 UBE2NLQ5JXB2 153 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 CD276Q5ZPR3 534 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 RAB12Q6IQ22 244 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 BIVMQ86UB2 503 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 SUMF2Q8NBJ7 301 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 TMEM185AQ8NFB2 350 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 RAB40AQ8WXH6 277 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 DMRTB1Q96MA1 342 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 DPCDQ9BVM2 203 aaPredicted RBP9.6□□□□□ -0.87
SCN9A-204ENST00000452182 NXF2Q9GZY0 626 aaKnown RBP9.6□□□□□ -0.87
SCN9A-204ENST00000452182 ZNF581Q9P0T4 197 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 A3GALT2U3KPV4 340 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 PPIAL4CA0A0B4J2A2 164 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 KIAA1324LA8MWY0 1029 aaPredicted RBP9.6□□□□□ -0.87
SCN9A-204ENST00000452182 FAM157AC9JC47 383 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 MCRIP1C9JLW8 97 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 SOCS1O15524 211 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 CA11O75493 328 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 APOA1P02647 267 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 BLVRBP30043 206 aaPredicted RBP9.6□□□□□ -0.87
SCN9A-204ENST00000452182 GZMKP49863 264 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 TMEM50BP56557 158 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 ARL6IP1Q15041 203 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 GRK1Q15835 563 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 ATAD3CQ5T2N8 411 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 CIARTQ8N365 385 aaPredicted RBP9.6□□□□□ -0.87
SCN9A-204ENST00000452182 SAMD12Q8N8I0 201 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 OR4S1Q8NGB4 309 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 OR10R2Q8NGX6 335 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 C8orf46Q8TAG6 207 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 NEDD4LQ96PU5 975 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 DCUN1D5Q9BTE7 237 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 ATG5Q9H1Y0 275 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 NCOR1P1Q9H4R4 102 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 COMMD3Q9UBI1 195 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 PEX16Q9Y5Y5 336 aa9.6□□□□□ -0.87
SCN9A-204ENST00000452182 CELSR1Q9NYQ6 3014 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms