RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 RAB3CQ96E17 227 aa12.58□□□□□ -0.4
CCNE1-203ENST00000444983 SULT4A1Q9BR01 284 aa12.58□□□□□ -0.4
CCNE1-203ENST00000444983 PECRQ9BY49 303 aa12.58□□□□□ -0.4
CCNE1-203ENST00000444983 CTSZQ9UBR2 303 aa12.58□□□□□ -0.4
CCNE1-203ENST00000444983 DUX4Q9UBX2 424 aa12.58□□□□□ -0.4
CCNE1-203ENST00000444983 V9GYH0 126 aa12.58□□□□□ -0.4
CCNE1-203ENST00000444983 PRRC2AP48634 2157 aaKnown RBP12.58□□□□□ -0.4
CCNE1-203ENST00000444983 IGHV4-30-2A0A087WSY4 118 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 SIRPB1O00241 398 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 TMPRSS2O15393 492 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 CSN2P05814 226 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 MELTFP08582 738 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 WNT2P09544 360 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 HIST1H1DP16402 221 aaKnown RBP12.57□□□□□ -0.4
CCNE1-203ENST00000444983 NR4A2P43354 598 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 GABRA2P47869 451 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 OR3A1P47881 315 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 IL13RA1P78552 427 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 SCN1BQ07699 218 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 CLEC12BQ2HXU8 276 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 TMEM69Q5SWH9 247 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 ATAD3CQ5T2N8 411 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 SHEQ5VZ18 495 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 OLFML2AQ68BL7 652 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 BRICD5Q6PL45 260 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 ZNF841Q6ZN19 808 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 FAM216BQ8N7L0 139 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 DTX3Q8N9I9 347 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 SNX22Q96L94 193 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 NEDD4LQ96PU5 975 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 ABHD1Q96SE0 405 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 DPCDQ9BVM2 203 aaPredicted RBP12.57□□□□□ -0.4
CCNE1-203ENST00000444983 FAM234AQ9H0X4 552 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 PLEKHJ1Q9NW61 149 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 NOTCH2Q04721 2471 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 TRAV18A0A075B6X5 111 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 F5H0A9 414 aaPredicted RBP12.57□□□□□ -0.4
CCNE1-203ENST00000444983 TK1P04183 234 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 INHBBP09529 407 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 SELLP14151 372 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 GNB3P16520 340 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 TAS2R20P59543 309 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 CDNFQ49AH0 187 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 SLC36A1Q7Z2H8 476 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 IZUMO1Q8IYV9 350 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 GAPTQ8N292 157 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 BPIFB2Q8N4F0 458 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 SPICQ8N5J4 248 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 OR4S1Q8NGB4 309 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 PHF21AQ96BD5 680 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 MED30Q96HR3 178 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 FOXC2Q99958 501 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 PIMREGQ9BSJ6 248 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 FAAP24Q9BTP7 215 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 AUNIPQ9H7T9 357 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 ZMAT3Q9HA38 289 aaKnown RBP12.57□□□□□ -0.4
CCNE1-203ENST00000444983 PATZ1Q9HBE1 687 aaKnown RBP12.57□□□□□ -0.4
CCNE1-203ENST00000444983 AKIP1Q9NQ31 210 aa12.57□□□□□ -0.4
CCNE1-203ENST00000444983 A0A096LNT2 108 aa12.56□□□□□ -0.4
CCNE1-203ENST00000444983 ISPDA4D126 451 aa12.56□□□□□ -0.4
CCNE1-203ENST00000444983 ADAM20O43506 726 aa12.56□□□□□ -0.4
CCNE1-203ENST00000444983 GSTP1P09211 210 aaKnown RBP12.56□□□□□ -0.4
CCNE1-203ENST00000444983 TALDO1P37837 337 aa12.56□□□□□ -0.4
CCNE1-203ENST00000444983 ARL6IP1Q15041 203 aa12.56□□□□□ -0.4
CCNE1-203ENST00000444983 ZNF79Q15937 498 aa12.56□□□□□ -0.4
CCNE1-203ENST00000444983 NKAPLQ5M9Q1 402 aa12.56□□□□□ -0.4
CCNE1-203ENST00000444983 OR8H2Q8N162 312 aa12.56□□□□□ -0.4
CCNE1-203ENST00000444983 MFSD4AQ8N468 514 aa12.56□□□□□ -0.4
CCNE1-203ENST00000444983 MIOXQ9UGB7 285 aa12.56□□□□□ -0.4
CCNE1-203ENST00000444983 ELF5Q9UKW6 265 aaPredicted RBP12.56□□□□□ -0.4
CCNE1-203ENST00000444983 DOCK11Q5JSL3 2073 aa12.56□□□□□ -0.4
CCNE1-203ENST00000444983 DSCAML1Q8TD84 2053 aa12.56□□□□□ -0.4
CCNE1-203ENST00000444983 A0A0G2JMP0 313 aa12.55□□□□□ -0.4
CCNE1-203ENST00000444983 A0A0X1KG70 313 aa12.55□□□□□ -0.4
CCNE1-203ENST00000444983 FABP12A6NFH5 140 aa12.55□□□□□ -0.4
CCNE1-203ENST00000444983 SERPINE3A8MV23 424 aa12.55□□□□□ -0.4
CCNE1-203ENST00000444983 MCRIP1C9JLW8 97 aa12.55□□□□□ -0.4
CCNE1-203ENST00000444983 CA11O75493 328 aa12.55□□□□□ -0.4
CCNE1-203ENST00000444983 PTBP1P26599 531 aaKnown RBP eCLIP12.55□□□□□ -0.4
CCNE1-203ENST00000444983 KCNJ3P48549 501 aa12.55□□□□□ -0.4
CCNE1-203ENST00000444983 LMO4P61968 165 aa12.55□□□□□ -0.4
CCNE1-203ENST00000444983 LSAMPQ13449 338 aa12.55□□□□□ -0.4
CCNE1-203ENST00000444983 RBM39Q14498 530 aaKnown RBP12.55□□□□□ -0.4
CCNE1-203ENST00000444983 PAN3Q58A45 887 aaKnown RBP12.55□□□□□ -0.4
CCNE1-203ENST00000444983 Q5PR19 223 aa12.55□□□□□ -0.4
CCNE1-203ENST00000444983 HACD4Q5VWC8 232 aa12.55□□□□□ -0.4
CCNE1-203ENST00000444983 OR4M2Q8NGB6 313 aa12.55□□□□□ -0.4
CCNE1-203ENST00000444983 CHST6Q9GZX3 395 aa12.55□□□□□ -0.4
CCNE1-203ENST00000444983 PPA2Q9H2U2 334 aa12.55□□□□□ -0.4
CCNE1-203ENST00000444983 RABL2AQ9UBK7 228 aaPredicted RBP12.55□□□□□ -0.4
CCNE1-203ENST00000444983 RABL2BQ9UNT1 228 aa12.55□□□□□ -0.4
CCNE1-203ENST00000444983 SETXQ7Z333 2677 aaKnown RBP12.55□□□□□ -0.4
CCNE1-203ENST00000444983 TMEM235A6NFC5 223 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 NKX6-3A6NJ46 265 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 HSPB6O14558 160 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 NAPSAO96009 420 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 IGHV2-5P01817 119 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 PTHLHP12272 177 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 SLC25A16P16260 332 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 PNLIPRP3Q17RR3 467 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms