RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 ZNF729A6NN14 1252 aaPredicted RBP11.25□□□□□ -0.61
HMGN1-208ENST00000443046 J3QR06 171 aa11.25□□□□□ -0.61
HMGN1-208ENST00000443046 AP4M1O00189 453 aa11.25□□□□□ -0.61
HMGN1-208ENST00000443046 SH2D1BO14796 132 aa11.25□□□□□ -0.61
HMGN1-208ENST00000443046 ELANEP08246 267 aa11.25□□□□□ -0.61
HMGN1-208ENST00000443046 CALCBP10092 127 aa11.25□□□□□ -0.61
HMGN1-208ENST00000443046 PRKACAP17612 351 aa11.25□□□□□ -0.61
HMGN1-208ENST00000443046 GPR12P47775 334 aa11.25□□□□□ -0.61
HMGN1-208ENST00000443046 INSL3P51460 131 aa11.25□□□□□ -0.61
HMGN1-208ENST00000443046 ACTR3P61158 418 aa11.25□□□□□ -0.61
HMGN1-208ENST00000443046 CBX1P83916 185 aa11.25□□□□□ -0.61
HMGN1-208ENST00000443046 CFHR3Q02985 330 aa11.25□□□□□ -0.61
HMGN1-208ENST00000443046 ZNF260Q3ZCT1 412 aa11.25□□□□□ -0.61
HMGN1-208ENST00000443046 FAM98BQ52LJ0 330 aaKnown RBP11.25□□□□□ -0.61
HMGN1-208ENST00000443046 C16orf89Q6UX73 402 aa11.25□□□□□ -0.61
HMGN1-208ENST00000443046 CCDC54Q8NEL0 328 aa11.25□□□□□ -0.61
HMGN1-208ENST00000443046 CNN2Q99439 309 aaKnown RBP11.25□□□□□ -0.61
HMGN1-208ENST00000443046 MNTQ99583 582 aa11.25□□□□□ -0.61
HMGN1-208ENST00000443046 ELAC2Q9BQ52 826 aaKnown RBP11.25□□□□□ -0.61
HMGN1-208ENST00000443046 COMMD4Q9H0A8 199 aa11.25□□□□□ -0.61
HMGN1-208ENST00000443046 LINC00574Q9H8X3 128 aa11.25□□□□□ -0.61
HMGN1-208ENST00000443046 PLEKHA1Q9HB21 404 aa11.25□□□□□ -0.61
HMGN1-208ENST00000443046 ADGRL4Q9HBW9 690 aa11.25□□□□□ -0.61
HMGN1-208ENST00000443046 PALMDQ9NP74 551 aa11.25□□□□□ -0.61
HMGN1-208ENST00000443046 EXOSC4Q9NPD3 245 aaKnown RBP11.25□□□□□ -0.61
HMGN1-208ENST00000443046 FRAS1Q86XX4 4008 aa11.25□□□□□ -0.61
HMGN1-208ENST00000443046 IGKV1-9A0A0C4DH69 117 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 IGKV1-12A0A0C4DH73 117 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 KBTBD11-OT1A0A1B0GTJ5 212 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 SYT7O43581 403 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 CST1P01037 141 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 IGKV1D-33P01593 117 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 IGKV1-33P01594 117 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 IGKV1D-12P01611 117 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 RAP2AP10114 183 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 RBP2P50120 134 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 ATP1B3P54709 279 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 MS4A2Q01362 244 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 GPR50Q13585 617 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 HES1Q14469 280 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 HNF4GQ14541 408 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 CXorf66Q5JRM2 361 aaPredicted RBP11.24□□□□□ -0.61
HMGN1-208ENST00000443046 Q6P435 159 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 SLC35F2Q8IXU6 374 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 OR8H3Q8N146 312 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 Q8N6K4 173 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 C4orf3Q8WVX3 66 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 C10orf35Q96D05 121 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 ABCG5Q9H222 651 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 ARL8BQ9NVJ2 186 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 CLN6Q9NWW5 311 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 NDE1Q9NXR1 346 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 TVP23BQ9NYZ1 205 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 NKX1-2Q9UD57 310 aaPredicted RBP11.24□□□□□ -0.61
HMGN1-208ENST00000443046 TAGLN3Q9UI15 199 aa11.24□□□□□ -0.61
HMGN1-208ENST00000443046 AMMECR1Q9Y4X0 333 aaPredicted RBP11.24□□□□□ -0.61
HMGN1-208ENST00000443046 HERC2O95714 4834 aa11.23□□□□□ -0.61
HMGN1-208ENST00000443046 SERPINA3P01011 423 aa11.23□□□□□ -0.61
HMGN1-208ENST00000443046 FRMD6-AS1P0C7T7 363 aa11.23□□□□□ -0.61
HMGN1-208ENST00000443046 NFYBP25208 207 aa11.23□□□□□ -0.61
HMGN1-208ENST00000443046 RAB7AP51149 207 aa11.23□□□□□ -0.61
HMGN1-208ENST00000443046 SNU13P55769 128 aaKnown RBP11.23□□□□□ -0.61
HMGN1-208ENST00000443046 EFNB1P98172 346 aa11.23□□□□□ -0.61
HMGN1-208ENST00000443046 PDZK1IP1Q13113 114 aa11.23□□□□□ -0.61
HMGN1-208ENST00000443046 MADCAM1Q13477 382 aa11.23□□□□□ -0.61
HMGN1-208ENST00000443046 TRIM25Q14258 630 aaKnown RBP11.23□□□□□ -0.61
HMGN1-208ENST00000443046 ODF4Q2M2E3 257 aa11.23□□□□□ -0.61
HMGN1-208ENST00000443046 KRBOX4Q5JUW0 171 aa11.23□□□□□ -0.61
HMGN1-208ENST00000443046 MEPCEQ7L2J0 689 aaKnown RBP11.23□□□□□ -0.61
HMGN1-208ENST00000443046 SSX6Q7RTT6 188 aa11.23□□□□□ -0.61
HMGN1-208ENST00000443046 DHFR2Q86XF0 187 aa11.23□□□□□ -0.61
HMGN1-208ENST00000443046 TGIF2LXQ8IUE1 241 aa11.23□□□□□ -0.61
HMGN1-208ENST00000443046 HS3ST5Q8IZT8 346 aa11.23□□□□□ -0.61
HMGN1-208ENST00000443046 MYOZ3Q8TDC0 251 aa11.23□□□□□ -0.61
HMGN1-208ENST00000443046 PP6455Q8WZ26 134 aa11.23□□□□□ -0.61
HMGN1-208ENST00000443046 HRASLS5Q96KN8 279 aa11.23□□□□□ -0.61
HMGN1-208ENST00000443046 TEX12Q9BXU0 123 aa11.23□□□□□ -0.61
HMGN1-208ENST00000443046 GON7Q9BXV9 100 aa11.23□□□□□ -0.61
HMGN1-208ENST00000443046 LIN7CQ9NUP9 197 aaKnown RBP11.23□□□□□ -0.61
HMGN1-208ENST00000443046 ARGLU1Q9NWB6 273 aaPredicted RBP11.23□□□□□ -0.61
HMGN1-208ENST00000443046 PSG11Q9UQ72 335 aa11.23□□□□□ -0.61
HMGN1-208ENST00000443046 GSTK1Q9Y2Q3 226 aa11.23□□□□□ -0.61
HMGN1-208ENST00000443046 H3BSH0 61 aa11.22□□□□□ -0.61
HMGN1-208ENST00000443046 SLC33A1O00400 549 aaPredicted RBP11.22□□□□□ -0.61
HMGN1-208ENST00000443046 PRKYO43930 277 aa11.22□□□□□ -0.61
HMGN1-208ENST00000443046 KDM4BO94953 1096 aa11.22□□□□□ -0.61
HMGN1-208ENST00000443046 CYB5AP00167 134 aa11.22□□□□□ -0.61
HMGN1-208ENST00000443046 IGHG4P01861 327 aa11.22□□□□□ -0.61
HMGN1-208ENST00000443046 ASPHD1Q5U4P2 390 aa11.22□□□□□ -0.61
HMGN1-208ENST00000443046 AADACL4Q5VUY2 407 aa11.22□□□□□ -0.61
HMGN1-208ENST00000443046 ZFAND6Q6FIF0 208 aa11.22□□□□□ -0.61
HMGN1-208ENST00000443046 OVCH2Q7RTZ1 564 aa11.22□□□□□ -0.61
HMGN1-208ENST00000443046 BCDIN3DQ7Z5W3 292 aaKnown RBP11.22□□□□□ -0.61
HMGN1-208ENST00000443046 Q8N9W7 124 aa11.22□□□□□ -0.61
HMGN1-208ENST00000443046 CHST4Q8NCG5 386 aa11.22□□□□□ -0.61
HMGN1-208ENST00000443046 PPIL3Q9H2H8 161 aaKnown RBP11.22□□□□□ -0.61
HMGN1-208ENST00000443046 NCOR1P1Q9H4R4 102 aa11.22□□□□□ -0.61
HMGN1-208ENST00000443046 ZNF556Q9HAH1 456 aa11.22□□□□□ -0.61
HMGN1-208ENST00000443046 EDA2RQ9HAV5 297 aa11.22□□□□□ -0.61
HMGN1-208ENST00000443046 PLSCR3Q9NRY6 295 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms