RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 PLEKHA1Q9HB21 404 aa6.58□□□□□ -1.36
CDH13-203ENST00000431540 HMG20AQ9NP66 347 aa6.58□□□□□ -1.36
CDH13-203ENST00000431540 GPR173Q9NS66 373 aa6.58□□□□□ -1.36
CDH13-203ENST00000431540 CCDC182A6NF36 153 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 METTL15A6NJ78 407 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 CCRL2O00421 344 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 IGHG2P01859 326 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 LPLP06858 475 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 CGB3P0DN86 165 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 CGB7P0DN87 165 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 DBTP11182 482 aaKnown RBP6.57□□□□□ -1.36
CDH13-203ENST00000431540 CHATP28329 748 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 CDX1P47902 265 aaPredicted RBP6.57□□□□□ -1.36
CDH13-203ENST00000431540 GLIPR1P48060 266 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 CEBPDP49716 269 aaPredicted RBP6.57□□□□□ -1.36
CDH13-203ENST00000431540 RAB7AP51149 207 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 CCR9P51686 369 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 HCCSP53701 268 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 RPL23AP62750 156 aaKnown RBP6.57□□□□□ -1.36
CDH13-203ENST00000431540 PDZK1IP1Q13113 114 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 Q3ZCU0 254 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 ABCA11PQ4W5N1 156 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 FDX2Q6P4F2 183 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 FAHD1Q6P587 224 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 TEX38Q6PEX7 206 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 CCDC121Q6ZUS5 278 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 SLC25A26Q70HW3 274 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 FOXRED2Q8IWF2 684 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 SLC35F2Q8IXU6 374 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 ADGRG5Q8IZF4 528 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 RNF152Q8N8N0 203 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 C8orf31Q8N9H6 132 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 OR52N4Q8NGI2 321 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 TMEM163Q8TC26 289 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 CANT1Q8WVQ1 401 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 EMG1Q92979 244 aaKnown RBP6.57□□□□□ -1.36
CDH13-203ENST00000431540 OR5M11Q96RB7 305 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 ADGRL4Q9HBW9 690 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 ZNF446Q9NWS9 450 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 TVP23BQ9NYZ1 205 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 MRM2Q9UI43 246 aaKnown RBP6.57□□□□□ -1.36
CDH13-203ENST00000431540 MOB4Q9Y3A3 225 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 LSM4Q9Y4Z0 139 aaKnown RBP6.57□□□□□ -1.36
CDH13-203ENST00000431540 HSPE1-MOB4S4R3N1 261 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 U3KQK5 164 aa6.57□□□□□ -1.36
CDH13-203ENST00000431540 KBTBD11-OT1A0A1B0GTJ5 212 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 FAM230AA0A1W2PPH8 454 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 PSPNO60542 156 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 ENTPD6O75354 484 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 KDM4BO94953 1096 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 PIPP12273 146 aaPredicted RBP6.56□□□□□ -1.36
CDH13-203ENST00000431540 GZMHP20718 246 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 GABRR1P24046 479 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 CDK2P24941 298 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 PAX6P26367 422 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 C21orf33P30042 268 aaPredicted RBP6.56□□□□□ -1.36
CDH13-203ENST00000431540 OR3A1P47881 315 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 MTCP1P56278 107 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 ISL1P61371 349 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 MFGE8Q08431 387 aaPredicted RBP6.56□□□□□ -1.36
CDH13-203ENST00000431540 KIR2DS1Q14954 304 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 KRTAP19-4Q3LI73 84 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 TPTE2P1Q5T6R2 138 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 ELP2Q6IA86 826 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 TMEM179BQ7Z7N9 219 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 TRAPPC6BQ86SZ2 158 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 ZNF695Q8IW36 515 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 BBS1Q8NFJ9 593 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 OR8H1Q8NGG4 311 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 TRUB1Q8WWH5 349 aaKnown RBP6.56□□□□□ -1.36
CDH13-203ENST00000431540 RFKQ969G6 155 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 CPNE2Q96FN4 548 aaPredicted RBP6.56□□□□□ -1.36
CDH13-203ENST00000431540 HRASLS5Q96KN8 279 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 APOL4Q9BPW4 351 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 CADM1Q9BY67 442 aaKnown RBP6.56□□□□□ -1.36
CDH13-203ENST00000431540 BARHL1Q9BZE3 327 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 DCLRE1BQ9H816 532 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 EXOSC4Q9NPD3 245 aaKnown RBP6.56□□□□□ -1.36
CDH13-203ENST00000431540 COPS3Q9UNS2 423 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 STAB2Q8WWQ8 2551 aa6.56□□□□□ -1.36
CDH13-203ENST00000431540 IGKV1-27A0A075B6S5 117 aa6.55□□□□□ -1.36
CDH13-203ENST00000431540 A0A1W2PRX2 142 aa6.55□□□□□ -1.36
CDH13-203ENST00000431540 ODAMA1E959 279 aa6.55□□□□□ -1.36
CDH13-203ENST00000431540 NPIPB11E5RHQ5 1161 aa6.55□□□□□ -1.36
CDH13-203ENST00000431540 F8VVB4 439 aa6.55□□□□□ -1.36
CDH13-203ENST00000431540 F8VWA3 439 aa6.55□□□□□ -1.36
CDH13-203ENST00000431540 J3QR06 171 aa6.55□□□□□ -1.36
CDH13-203ENST00000431540 AP4M1O00189 453 aa6.55□□□□□ -1.36
CDH13-203ENST00000431540 MPZL2O60487 215 aa6.55□□□□□ -1.36
CDH13-203ENST00000431540 ELANEP08246 267 aa6.55□□□□□ -1.36
CDH13-203ENST00000431540 SNRNP70P08621 437 aaKnown RBP6.55□□□□□ -1.36
CDH13-203ENST00000431540 ATF1P18846 271 aa6.55□□□□□ -1.36
CDH13-203ENST00000431540 PTGFRP43088 359 aa6.55□□□□□ -1.36
CDH13-203ENST00000431540 OR3A4PP47883 348 aa6.55□□□□□ -1.36
CDH13-203ENST00000431540 GYS2P54840 703 aa6.55□□□□□ -1.36
CDH13-203ENST00000431540 MADCAM1Q13477 382 aa6.55□□□□□ -1.36
CDH13-203ENST00000431540 PNLIPRP3Q17RR3 467 aa6.55□□□□□ -1.36
CDH13-203ENST00000431540 PLA1AQ53H76 456 aa6.55□□□□□ -1.36
CDH13-203ENST00000431540 SLC25A30Q5SVS4 291 aa6.55□□□□□ -1.36
CDH13-203ENST00000431540 C9orf66Q5T8R8 295 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms