RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 RBFOX3A6NFN3 312 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 EFCAB9A8MZ26 197 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 NDUFS5O43920 106 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 MMP23AO75900 390 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 SUPT7LO94864 414 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 SOX14O95416 240 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 KLF8O95600 359 aaPredicted RBP3.56□□□□□ -1.84
LSM5-206ENST00000409987 CD74P04233 296 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 TYMSP04818 313 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 BCHEP06276 602 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 CDK1P06493 297 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 ZNF19P17023 458 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 KRTAP10-5P60370 271 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 TIMM10P62072 90 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 CCL7P80098 99 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 IFITM3Q01628 133 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 CDC20Q12834 499 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 HERPUD1Q15011 391 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 C4orf26Q17RF5 130 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 CLEC12BQ2HXU8 276 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 HLA-DRB5Q30154 266 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 ACSM3Q53FZ2 586 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 SPIN4Q56A73 249 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 TCEAL5Q5H9L2 206 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 KCTD16Q68DU8 428 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 CD200R1LQ6Q8B3 271 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 FAM183BPQ6ZVS7 135 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 FAM19A5Q7Z5A7 132 aaPredicted RBP3.56□□□□□ -1.84
LSM5-206ENST00000409987 RIBC1Q8N443 379 aaPredicted RBP3.56□□□□□ -1.84
LSM5-206ENST00000409987 OR52E4Q8NGH9 312 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 LINC01006Q8NI28 216 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 DCUN1D4Q92564 292 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 HGDQ93099 445 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 TCEAL3Q969E4 200 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 TMEM101Q96IK0 257 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 FAAP24Q9BTP7 215 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 TMEM208Q9BTX3 173 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 SFXN3Q9BWM7 321 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 TAPBPLQ9BX59 468 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 BCL2L14Q9BZR8 327 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 METTL9Q9H1A3 318 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 FAM206AQ9NX38 181 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 SNX10Q9Y5X0 201 aa3.56□□□□□ -1.84
LSM5-206ENST00000409987 PAPPAQ13219 1627 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 CENPFP49454 3210 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 IGHV3-74A0A0B4J1X5 117 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 DAPL1A0PJW8 107 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 ACOX3O15254 700 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 HLA-DPB1P04440 258 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 IGKV5-2P06315 115 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 CRISP2P16562 243 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 APLNRP35414 380 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 DRD3P35462 400 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 RBMXP38159 391 aaKnown RBP3.55□□□□□ -1.84
LSM5-206ENST00000409987 IFNGR2P38484 337 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 IDH2P48735 452 aaKnown RBP3.55□□□□□ -1.84
LSM5-206ENST00000409987 ERVS71-1P61550 626 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 LSM6P62312 80 aaKnown RBP3.55□□□□□ -1.84
LSM5-206ENST00000409987 FAM3AP98173 230 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 PRDX1Q06830 199 aaKnown RBP3.55□□□□□ -1.84
LSM5-206ENST00000409987 NAB1Q13506 487 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 FAM53BQ14153 422 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 GINS1Q14691 196 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 CASP8Q14790 479 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 C16orf72Q14CZ0 275 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 RBMY1FQ15415 496 aaKnown RBP3.55□□□□□ -1.84
LSM5-206ENST00000409987 ZNF79Q15937 498 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 C6orf99Q4VX62 202 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 ORMDL2Q53FV1 153 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 HES5Q5TA89 166 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 CLEC19AQ6UXS0 136 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 IL34Q6ZMJ4 242 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 ACP7Q6ZNF0 438 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 FAM92BQ6ZTR7 304 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 C11orf53Q8IXP5 236 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 PRSS58Q8IYP2 241 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 CCNYL1Q8N7R7 359 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 BLOC1S5Q8TDH9 187 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 RAB8BQ92930 207 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 TESCQ96BS2 214 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 OR10C1Q96KK4 312 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 QKIQ96PU8 341 aaKnown RBP eCLIP3.55□□□□□ -1.84
LSM5-206ENST00000409987 DHRS9Q9BPW9 319 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 NUDT9Q9BW91 350 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 SUCNR1Q9BXA5 334 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 SLC22A4Q9H015 551 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 ZNF337Q9Y3M9 751 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 SAMHD1Q9Y3Z3 626 aaKnown RBP3.55□□□□□ -1.84
LSM5-206ENST00000409987 ABCA3Q99758 1704 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 KIF1AQ12756 1690 aa3.55□□□□□ -1.84
LSM5-206ENST00000409987 ANKRD30AQ9BXX3 1397 aa3.54□□□□□ -1.84
LSM5-206ENST00000409987 SBF2Q86WG5 1849 aa3.54□□□□□ -1.84
LSM5-206ENST00000409987 PARP4Q9UKK3 1724 aaKnown RBP3.54□□□□□ -1.84
LSM5-206ENST00000409987 DNASE2O00115 360 aaPredicted RBP3.54□□□□□ -1.84
LSM5-206ENST00000409987 TAAR5O14804 337 aa3.54□□□□□ -1.84
LSM5-206ENST00000409987 NPIPB7O75200 414 aa3.54□□□□□ -1.84
LSM5-206ENST00000409987 SUPT3HO75486 399 aa3.54□□□□□ -1.84
LSM5-206ENST00000409987 REM1O75628 298 aa3.54□□□□□ -1.84
LSM5-206ENST00000409987 ATF1P18846 271 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms