RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 DPCDQ9BVM2 203 aaPredicted RBP17.12■□□□□ 0.33
C4orf48-202ENST00000409860 CHST6Q9GZX3 395 aa17.12■□□□□ 0.33
C4orf48-202ENST00000409860 LPAR2Q9HBW0 351 aa17.12■□□□□ 0.33
C4orf48-202ENST00000409860 SPATA2Q9UM82 520 aa17.12■□□□□ 0.33
C4orf48-202ENST00000409860 KIAA1324LA8MWY0 1029 aaPredicted RBP17.11■□□□□ 0.33
C4orf48-202ENST00000409860 HSPB6O14558 160 aa17.11■□□□□ 0.33
C4orf48-202ENST00000409860 MGST3O14880 152 aa17.11■□□□□ 0.33
C4orf48-202ENST00000409860 PDCD6O75340 191 aa17.11■□□□□ 0.33
C4orf48-202ENST00000409860 ECDO95905 644 aaPredicted RBP17.11■□□□□ 0.33
C4orf48-202ENST00000409860 MSMBP08118 114 aa17.11■□□□□ 0.33
C4orf48-202ENST00000409860 CD99P14209 185 aa17.11■□□□□ 0.33
C4orf48-202ENST00000409860 FUT3P21217 361 aa17.11■□□□□ 0.33
C4orf48-202ENST00000409860 ZFP36P26651 326 aaKnown RBP17.11■□□□□ 0.33
C4orf48-202ENST00000409860 OR3A1P47881 315 aa17.11■□□□□ 0.33
C4orf48-202ENST00000409860 KCNJ3P48549 501 aa17.11■□□□□ 0.33
C4orf48-202ENST00000409860 EFNB2P52799 333 aa17.11■□□□□ 0.33
C4orf48-202ENST00000409860 CYB5R2Q6BCY4 276 aa17.11■□□□□ 0.33
C4orf48-202ENST00000409860 METAP1DQ6UB28 335 aaPredicted RBP17.11■□□□□ 0.33
C4orf48-202ENST00000409860 GDPD3Q7L5L3 318 aa17.11■□□□□ 0.33
C4orf48-202ENST00000409860 SUMF2Q8NBJ7 301 aa17.11■□□□□ 0.33
C4orf48-202ENST00000409860 OR4S1Q8NGB4 309 aa17.11■□□□□ 0.33
C4orf48-202ENST00000409860 OR56B1Q8NGI3 324 aa17.11■□□□□ 0.33
C4orf48-202ENST00000409860 OR5H6Q8NGV6 325 aa17.11■□□□□ 0.33
C4orf48-202ENST00000409860 H1FXQ92522 213 aaKnown RBP17.11■□□□□ 0.33
C4orf48-202ENST00000409860 PPA2Q9H2U2 334 aa17.11■□□□□ 0.33
C4orf48-202ENST00000409860 ZNF581Q9P0T4 197 aa17.11■□□□□ 0.33
C4orf48-202ENST00000409860 RCC2Q9P258 522 aaKnown RBP17.11■□□□□ 0.33
C4orf48-202ENST00000409860 TEX15Q9BXT5 2789 aa17.11■□□□□ 0.33
C4orf48-202ENST00000409860 LOC105371242A0A075B767 164 aa17.1■□□□□ 0.33
C4orf48-202ENST00000409860 FCN3O75636 299 aa17.1■□□□□ 0.33
C4orf48-202ENST00000409860 INHBBP09529 407 aa17.1■□□□□ 0.33
C4orf48-202ENST00000409860 BLVRBP30043 206 aaPredicted RBP17.1■□□□□ 0.33
C4orf48-202ENST00000409860 VEGFCP49767 419 aa17.1■□□□□ 0.33
C4orf48-202ENST00000409860 NKAPLQ5M9Q1 402 aa17.1■□□□□ 0.33
C4orf48-202ENST00000409860 RAB12Q6IQ22 244 aa17.1■□□□□ 0.33
C4orf48-202ENST00000409860 MZT2AQ6P582 158 aa17.1■□□□□ 0.33
C4orf48-202ENST00000409860 FGFRL1Q8N441 504 aa17.1■□□□□ 0.33
C4orf48-202ENST00000409860 FAM89BQ8N5H3 189 aa17.1■□□□□ 0.33
C4orf48-202ENST00000409860 NEK7Q8TDX7 302 aa17.1■□□□□ 0.33
C4orf48-202ENST00000409860 TMUB1Q9BVT8 246 aa17.1■□□□□ 0.33
C4orf48-202ENST00000409860 SHARPINQ9H0F6 387 aa17.1■□□□□ 0.33
C4orf48-202ENST00000409860 ATG5Q9H1Y0 275 aa17.1■□□□□ 0.33
C4orf48-202ENST00000409860 RHBDL2Q9NX52 303 aa17.1■□□□□ 0.33
C4orf48-202ENST00000409860 PEX16Q9Y5Y5 336 aa17.1■□□□□ 0.33
C4orf48-202ENST00000409860 OTOGQ6ZRI0 2925 aa17.09■□□□□ 0.33
C4orf48-202ENST00000409860 TRBV23-1A0A0A0MS06 115 aa17.09■□□□□ 0.33
C4orf48-202ENST00000409860 A0A0A6YYD4 124 aa17.09■□□□□ 0.33
C4orf48-202ENST00000409860 FUOMA2VDF0 154 aa17.09■□□□□ 0.33
C4orf48-202ENST00000409860 MCRIP1C9JLW8 97 aa17.09■□□□□ 0.33
C4orf48-202ENST00000409860 SCGNO76038 276 aa17.09■□□□□ 0.33
C4orf48-202ENST00000409860 CSN2P05814 226 aa17.09■□□□□ 0.33
C4orf48-202ENST00000409860 GLAP06280 429 aa17.09■□□□□ 0.33
C4orf48-202ENST00000409860 FOSL1P15407 271 aa17.09■□□□□ 0.33
C4orf48-202ENST00000409860 RBM39Q14498 530 aaKnown RBP17.09■□□□□ 0.33
C4orf48-202ENST00000409860 EDDM3AQ14507 147 aa17.09■□□□□ 0.33
C4orf48-202ENST00000409860 SIGIRRQ6IA17 410 aa17.09■□□□□ 0.33
C4orf48-202ENST00000409860 BTN2A1Q7KYR7 527 aa17.09■□□□□ 0.33
C4orf48-202ENST00000409860 MSI2Q96DH6 328 aaKnown RBP17.09■□□□□ 0.33
C4orf48-202ENST00000409860 BATF3Q9NR55 127 aa17.09■□□□□ 0.33
C4orf48-202ENST00000409860 COMMD3Q9UBI1 195 aa17.09■□□□□ 0.33
C4orf48-202ENST00000409860 POLR3KQ9Y2Y1 108 aaPredicted RBP17.09■□□□□ 0.33
C4orf48-202ENST00000409860 MALRD1Q5VYJ5 2156 aa17.08■□□□□ 0.33
C4orf48-202ENST00000409860 TRAV20A0A0B4J274 112 aa17.08■□□□□ 0.32
C4orf48-202ENST00000409860 C22orf46C9J442 243 aa17.08■□□□□ 0.32
C4orf48-202ENST00000409860 SOCS1O15524 211 aa17.08■□□□□ 0.32
C4orf48-202ENST00000409860 ENSAO43768 121 aaKnown RBP17.08■□□□□ 0.32
C4orf48-202ENST00000409860 ZNF16P17020 682 aaPredicted RBP17.08■□□□□ 0.32
C4orf48-202ENST00000409860 CHATP28329 748 aa17.08■□□□□ 0.32
C4orf48-202ENST00000409860 EDDM3BP56851 147 aa17.08■□□□□ 0.32
C4orf48-202ENST00000409860 ATXN7L3Q14CW9 347 aaPredicted RBP17.08■□□□□ 0.32
C4orf48-202ENST00000409860 UBE2NLQ5JXB2 153 aa17.08■□□□□ 0.32
C4orf48-202ENST00000409860 GLCCI1Q86VQ1 547 aa17.08■□□□□ 0.32
C4orf48-202ENST00000409860 BPIFB2Q8N4F0 458 aa17.08■□□□□ 0.32
C4orf48-202ENST00000409860 SAMD12Q8N8I0 201 aa17.08■□□□□ 0.32
C4orf48-202ENST00000409860 PHF21AQ96BD5 680 aa17.08■□□□□ 0.32
C4orf48-202ENST00000409860 SLC25A38Q96DW6 304 aa17.08■□□□□ 0.32
C4orf48-202ENST00000409860 DCTN5Q9BTE1 182 aa17.08■□□□□ 0.32
C4orf48-202ENST00000409860 DCUN1D5Q9BTE7 237 aa17.08■□□□□ 0.32
C4orf48-202ENST00000409860 PLEKHJ1Q9NW61 149 aa17.08■□□□□ 0.32
C4orf48-202ENST00000409860 MED13LQ71F56 2210 aa17.07■□□□□ 0.32
C4orf48-202ENST00000409860 TGFAP01135 160 aa17.07■□□□□ 0.32
C4orf48-202ENST00000409860 ERP29P30040 261 aaKnown RBP17.07■□□□□ 0.32
C4orf48-202ENST00000409860 P2RX3P56373 397 aa17.07■□□□□ 0.32
C4orf48-202ENST00000409860 RPL31P62899 125 aaKnown RBP17.07■□□□□ 0.32
C4orf48-202ENST00000409860 FOXB2Q5VYV0 432 aa17.07■□□□□ 0.32
C4orf48-202ENST00000409860 BRICD5Q6PL45 260 aa17.07■□□□□ 0.32
C4orf48-202ENST00000409860 BTNL3Q6UXE8 466 aa17.07■□□□□ 0.32
C4orf48-202ENST00000409860 OR10R2Q8NGX6 335 aa17.07■□□□□ 0.32
C4orf48-202ENST00000409860 RAB40AQ8WXH6 277 aa17.07■□□□□ 0.32
C4orf48-202ENST00000409860 TMEM186Q96B77 213 aa17.07■□□□□ 0.32
C4orf48-202ENST00000409860 LPAR3Q9UBY5 353 aa17.07■□□□□ 0.32
C4orf48-202ENST00000409860 RPUSD1Q9UJJ7 312 aaKnown RBP17.07■□□□□ 0.32
C4orf48-202ENST00000409860 MAP1AP78559 2803 aaPredicted RBP17.07■□□□□ 0.32
C4orf48-202ENST00000409860 PPIAL4CA0A0B4J2A2 164 aa17.06■□□□□ 0.32
C4orf48-202ENST00000409860 IGHV2-70DA0A0C4DH43 119 aa17.06■□□□□ 0.32
C4orf48-202ENST00000409860 A0A1W2PQ09 198 aa17.06■□□□□ 0.32
C4orf48-202ENST00000409860 A6NHS1 94 aa17.06■□□□□ 0.32
C4orf48-202ENST00000409860 FOXI3A8MTJ6 420 aaPredicted RBP17.06■□□□□ 0.32
C4orf48-202ENST00000409860 DVL1P1P54792 670 aaPredicted RBP17.06■□□□□ 0.32
C4orf48-202ENST00000409860 KRBOX4Q5JUW0 171 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms