RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 TMEM14AQ9Y6G1 99 aa3.38□□□□□ -1.87
CLK1-203ENST00000409769 PRRC2CQ9Y520 2896 aaKnown RBP3.38□□□□□ -1.87
CLK1-203ENST00000409769 ARPC4-TTLL3A0A0A6YYG9 625 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 TRAV34A0A0B4J273 112 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 TRGV8A0A0C4DH27 118 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 DAPL1A0PJW8 107 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 OR6C6A6NF89 314 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 METTL15A6NJ78 407 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 A8MU10 97 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 ZNF878C9JN71 531 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 RER1O15258 196 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 MAGEB4O15481 346 aaPredicted RBP3.37□□□□□ -1.87
CLK1-203ENST00000409769 ZNF254O75437 659 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 SC5DO75845 299 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 PNPP00491 289 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 COX5BP10606 129 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 ZNF823P16415 610 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 ZNF32P17041 273 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 PSMB1P20618 241 aaKnown RBP3.37□□□□□ -1.87
CLK1-203ENST00000409769 ATP6V1E1P36543 226 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 OR3A1P47881 315 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 TGM4P49221 684 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 GTF2A1P52655 376 aaPredicted RBP3.37□□□□□ -1.87
CLK1-203ENST00000409769 OR12D2P58182 307 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 PSG4Q00888 419 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 SCN1BQ07699 218 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 SCRN3Q0VDG4 424 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 MRPL28Q13084 256 aaKnown RBP3.37□□□□□ -1.87
CLK1-203ENST00000409769 GPR50Q13585 617 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 TPBGQ13641 420 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 EIF2B1Q14232 305 aaKnown RBP3.37□□□□□ -1.87
CLK1-203ENST00000409769 CDK5R1Q15078 307 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 NEDD8Q15843 81 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 SSX1Q16384 188 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 GABRA6Q16445 453 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 SGCAQ16586 387 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 RSPO1Q2MKA7 263 aaPredicted RBP3.37□□□□□ -1.87
CLK1-203ENST00000409769 FBXL19-AS1Q494R0 122 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 CCDC58Q4VC31 144 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 TP53I3Q53FA7 332 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 C9orf135Q5VTT2 229 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 DMKNQ6E0U4 476 aaPredicted RBP3.37□□□□□ -1.87
CLK1-203ENST00000409769 PET117Q6UWS5 81 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 LRRN1Q6UXK5 716 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 TMPRSS11AQ6ZMR5 421 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 PLEKHG7Q6ZR37 379 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 Q6ZVQ6 151 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 DCXRQ7Z4W1 244 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 DPPA2Q7Z7J5 298 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 ZNF584Q8IVC4 421 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 SKA3Q8IX90 412 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 ZNF679Q8IYX0 411 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 LRRC18Q8N456 261 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 C17orf78Q8N4C9 275 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 ZNF433Q8N7K0 673 aaPredicted RBP3.37□□□□□ -1.87
CLK1-203ENST00000409769 WDR31Q8NA23 367 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 HAVCR2Q8TDQ0 301 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 THEM6Q8WUY1 208 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 RORBQ92753 470 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 BCL2L2Q92843 193 aaPredicted RBP3.37□□□□□ -1.87
CLK1-203ENST00000409769 SLAMF6Q96DU3 332 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 YIPF6Q96EC8 236 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 PELI1Q96FA3 418 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 C4orf36Q96KX1 117 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 PGLYRP3Q96LB9 341 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 MYCBPQ99417 103 aaPredicted RBP3.37□□□□□ -1.87
CLK1-203ENST00000409769 MGLLQ99685 303 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 COQ7Q99807 217 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 SH3GL3Q99963 347 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 MROQ9BYG7 248 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 TTTY10Q9BZA0 68 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 OR2H1Q9GZK4 316 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 CCDC90BQ9GZT6 254 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 OPN3Q9H1Y3 402 aaPredicted RBP3.37□□□□□ -1.87
CLK1-203ENST00000409769 NOX3Q9HBY0 568 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 ACOXLQ9NUZ1 547 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 BABAM2Q9NXR7 383 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 B3GNT2Q9NY97 397 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 SLCO1C1Q9NYB5 712 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 ATPIF1Q9UII2 106 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 LAMP5Q9UJQ1 280 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 SNX5Q9Y5X3 404 aa3.37□□□□□ -1.87
CLK1-203ENST00000409769 ABCA4P78363 2273 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 ICE1Q9Y2F5 2266 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 SMIM31A0A1B0GVY4 71 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 TRIM64BA6NI03 449 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 ACOD1A6NK06 481 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 OR4C45A6NMZ5 311 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 E5RGE8 158 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 J3QLW9 94 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 CCL21O00585 134 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 LRRTM2O43300 516 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 BCL2L11O43521 198 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 SGCEO43556 437 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 RAD51DO75771 328 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 LYZL6O75951 148 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 UBL3O95164 117 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 GABARAPO95166 117 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 FARS2O95363 451 aaKnown RBP3.36□□□□□ -1.87
CLK1-203ENST00000409769 IGKV3-15P01624 115 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms