RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 ARL6IP1Q15041 203 aa13.76□□□□□ -0.21
TSPAN4-208ENST00000409531 ATAD3CQ5T2N8 411 aa13.76□□□□□ -0.21
TSPAN4-208ENST00000409531 CYB5R2Q6BCY4 276 aa13.76□□□□□ -0.21
TSPAN4-208ENST00000409531 Q6P435 159 aa13.76□□□□□ -0.21
TSPAN4-208ENST00000409531 CD177Q8N6Q3 437 aa13.76□□□□□ -0.21
TSPAN4-208ENST00000409531 ASCC1Q8N9N2 400 aaKnown RBP13.76□□□□□ -0.21
TSPAN4-208ENST00000409531 OR8B3Q8NGG8 313 aa13.76□□□□□ -0.21
TSPAN4-208ENST00000409531 RAB39BQ96DA2 213 aa13.76□□□□□ -0.21
TSPAN4-208ENST00000409531 SLC25A38Q96DW6 304 aa13.76□□□□□ -0.21
TSPAN4-208ENST00000409531 SNX22Q96L94 193 aa13.76□□□□□ -0.21
TSPAN4-208ENST00000409531 OR8B2Q96RD0 313 aa13.76□□□□□ -0.21
TSPAN4-208ENST00000409531 CCL13Q99616 98 aa13.76□□□□□ -0.21
TSPAN4-208ENST00000409531 NUDT16L1Q9BRJ7 211 aaKnown RBP13.76□□□□□ -0.21
TSPAN4-208ENST00000409531 NICN1Q9BSH3 213 aa13.76□□□□□ -0.21
TSPAN4-208ENST00000409531 PATZ1Q9HBE1 687 aaKnown RBP13.76□□□□□ -0.21
TSPAN4-208ENST00000409531 PEX16Q9Y5Y5 336 aa13.76□□□□□ -0.21
TSPAN4-208ENST00000409531 NSD1Q96L73 2696 aaPredicted RBP13.76□□□□□ -0.21
TSPAN4-208ENST00000409531 FN1P02751 2386 aaKnown RBP13.75□□□□□ -0.21
TSPAN4-208ENST00000409531 FAM25AB3EWG3 89 aa13.75□□□□□ -0.21
TSPAN4-208ENST00000409531 FAM25CB3EWG5 89 aa13.75□□□□□ -0.21
TSPAN4-208ENST00000409531 FAM25GB3EWG6 89 aa13.75□□□□□ -0.21
TSPAN4-208ENST00000409531 SIRPB1O00241 398 aa13.75□□□□□ -0.21
TSPAN4-208ENST00000409531 HPGDSO60760 199 aa13.75□□□□□ -0.21
TSPAN4-208ENST00000409531 PDCD6O75340 191 aa13.75□□□□□ -0.21
TSPAN4-208ENST00000409531 GLAP06280 429 aa13.75□□□□□ -0.21
TSPAN4-208ENST00000409531 BLVRBP30043 206 aaPredicted RBP13.75□□□□□ -0.21
TSPAN4-208ENST00000409531 S100A5P33763 92 aa13.75□□□□□ -0.21
TSPAN4-208ENST00000409531 CEBPDP49716 269 aaPredicted RBP13.75□□□□□ -0.21
TSPAN4-208ENST00000409531 GZMKP49863 264 aa13.75□□□□□ -0.21
TSPAN4-208ENST00000409531 RBM39Q14498 530 aaKnown RBP13.75□□□□□ -0.21
TSPAN4-208ENST00000409531 OR5D13Q8NGL4 314 aa13.75□□□□□ -0.21
TSPAN4-208ENST00000409531 OR10R2Q8NGX6 335 aa13.75□□□□□ -0.21
TSPAN4-208ENST00000409531 NEIL1Q96FI4 390 aaPredicted RBP13.75□□□□□ -0.21
TSPAN4-208ENST00000409531 GAFA1Q96PS6 74 aa13.75□□□□□ -0.21
TSPAN4-208ENST00000409531 FAM234AQ9H0X4 552 aa13.75□□□□□ -0.21
TSPAN4-208ENST00000409531 PTTG2Q9NZH5 202 aa13.75□□□□□ -0.21
TSPAN4-208ENST00000409531 FBN3Q75N90 2809 aa13.75□□□□□ -0.21
TSPAN4-208ENST00000409531 YLPM1P49750 1951 aaKnown RBP13.75□□□□□ -0.21
TSPAN4-208ENST00000409531 ABCA2Q9BZC7 2435 aa13.75□□□□□ -0.21
TSPAN4-208ENST00000409531 MCRIP1C9JLW8 97 aa13.74□□□□□ -0.21
TSPAN4-208ENST00000409531 SLC33A1O00400 549 aaPredicted RBP13.74□□□□□ -0.21
TSPAN4-208ENST00000409531 CTDSP2O14595 271 aa13.74□□□□□ -0.21
TSPAN4-208ENST00000409531 NDUFB3O43676 98 aa13.74□□□□□ -0.21
TSPAN4-208ENST00000409531 CLPXO76031 633 aa13.74□□□□□ -0.21
TSPAN4-208ENST00000409531 IGHV4-31P0DP07 118 aa13.74□□□□□ -0.21
TSPAN4-208ENST00000409531 TALDO1P37837 337 aa13.74□□□□□ -0.21
TSPAN4-208ENST00000409531 KCNJ3P48549 501 aa13.74□□□□□ -0.21
TSPAN4-208ENST00000409531 NPY4RP50391 375 aa13.74□□□□□ -0.21
TSPAN4-208ENST00000409531 PDCD1Q15116 288 aa13.74□□□□□ -0.21
TSPAN4-208ENST00000409531 PAN3Q58A45 887 aaKnown RBP13.74□□□□□ -0.21
TSPAN4-208ENST00000409531 LRRC10Q5BKY1 277 aa13.74□□□□□ -0.21
TSPAN4-208ENST00000409531 Q6ZTK2 550 aa13.74□□□□□ -0.21
TSPAN4-208ENST00000409531 CMTM4Q8IZR5 234 aa13.74□□□□□ -0.21
TSPAN4-208ENST00000409531 FAM216BQ8N7L0 139 aa13.74□□□□□ -0.21
TSPAN4-208ENST00000409531 CLDND2Q8NHS1 167 aa13.74□□□□□ -0.21
TSPAN4-208ENST00000409531 RAB3CQ96E17 227 aa13.74□□□□□ -0.21
TSPAN4-208ENST00000409531 NARFLQ9H6Q4 476 aa13.74□□□□□ -0.21
TSPAN4-208ENST00000409531 YAE1D1Q9NRH1 226 aa13.74□□□□□ -0.21
TSPAN4-208ENST00000409531 PLEKHJ1Q9NW61 149 aa13.74□□□□□ -0.21
TSPAN4-208ENST00000409531 RCC2Q9P258 522 aaKnown RBP13.74□□□□□ -0.21
TSPAN4-208ENST00000409531 HSF4Q9ULV5 492 aa13.74□□□□□ -0.21
TSPAN4-208ENST00000409531 MAB21L2Q9Y586 359 aa13.74□□□□□ -0.21
TSPAN4-208ENST00000409531 A0A0A6YYD4 124 aa13.73□□□□□ -0.21
TSPAN4-208ENST00000409531 TRAV24A0A0B4J272 114 aa13.73□□□□□ -0.21
TSPAN4-208ENST00000409531 A8MV72 311 aaPredicted RBP13.73□□□□□ -0.21
TSPAN4-208ENST00000409531 INAFM1C9JVW0 142 aa13.73□□□□□ -0.21
TSPAN4-208ENST00000409531 K7N7A8 449 aa13.73□□□□□ -0.21
TSPAN4-208ENST00000409531 RAB27BO00194 218 aa13.73□□□□□ -0.21
TSPAN4-208ENST00000409531 GPR37O15354 613 aa13.73□□□□□ -0.21
TSPAN4-208ENST00000409531 SOCS1O15524 211 aa13.73□□□□□ -0.21
TSPAN4-208ENST00000409531 ZNF737O75373 536 aa13.73□□□□□ -0.21
TSPAN4-208ENST00000409531 IGHV2-5P01817 119 aa13.73□□□□□ -0.21
TSPAN4-208ENST00000409531 EIF4EP06730 217 aaKnown RBP13.73□□□□□ -0.21
TSPAN4-208ENST00000409531 WNT2P09544 360 aa13.73□□□□□ -0.21
TSPAN4-208ENST00000409531 AMY2BP19961 511 aa13.73□□□□□ -0.21
TSPAN4-208ENST00000409531 CHATP28329 748 aa13.73□□□□□ -0.21
TSPAN4-208ENST00000409531 NKAPLQ5M9Q1 402 aa13.73□□□□□ -0.21
TSPAN4-208ENST00000409531 SIGIRRQ6IA17 410 aa13.73□□□□□ -0.21
TSPAN4-208ENST00000409531 LYPD2Q6UXB3 125 aa13.73□□□□□ -0.21
TSPAN4-208ENST00000409531 OR8H2Q8N162 312 aa13.73□□□□□ -0.21
TSPAN4-208ENST00000409531 SUMF2Q8NBJ7 301 aa13.73□□□□□ -0.21
TSPAN4-208ENST00000409531 ZNRF1Q8ND25 227 aa13.73□□□□□ -0.21
TSPAN4-208ENST00000409531 TMEM185AQ8NFB2 350 aa13.73□□□□□ -0.21
TSPAN4-208ENST00000409531 NEK7Q8TDX7 302 aa13.73□□□□□ -0.21
TSPAN4-208ENST00000409531 DPCDQ9BVM2 203 aaPredicted RBP13.73□□□□□ -0.21
TSPAN4-208ENST00000409531 SLC25A10Q9UBX3 287 aaPredicted RBP13.73□□□□□ -0.21
TSPAN4-208ENST00000409531 SONP18583 2426 aaKnown RBP13.73□□□□□ -0.21
TSPAN4-208ENST00000409531 DSCAML1Q8TD84 2053 aa13.72□□□□□ -0.21
TSPAN4-208ENST00000409531 FUOMA2VDF0 154 aa13.72□□□□□ -0.21
TSPAN4-208ENST00000409531 FOXI3A8MTJ6 420 aaPredicted RBP13.72□□□□□ -0.21
TSPAN4-208ENST00000409531 F5H0A9 414 aaPredicted RBP13.72□□□□□ -0.21
TSPAN4-208ENST00000409531 MGST3O14880 152 aa13.72□□□□□ -0.21
TSPAN4-208ENST00000409531 XRCC3O43542 346 aa13.72□□□□□ -0.21
TSPAN4-208ENST00000409531 PSPNO60542 156 aa13.72□□□□□ -0.21
TSPAN4-208ENST00000409531 TFF1P04155 84 aa13.72□□□□□ -0.21
TSPAN4-208ENST00000409531 TK1P04183 234 aa13.72□□□□□ -0.21
TSPAN4-208ENST00000409531 CSN2P05814 226 aa13.72□□□□□ -0.21
TSPAN4-208ENST00000409531 ELK1P19419 428 aa13.72□□□□□ -0.21
TSPAN4-208ENST00000409531 CDK2P24941 298 aa13.72□□□□□ -0.21
TSPAN4-208ENST00000409531 GRK1Q15835 563 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms