RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 ZNF14P17017 642 aaPredicted RBP9.18□□□□□ -0.94
TRAF3IP2-201ENST00000340026 HERV-K104P61576 105 aa9.18□□□□□ -0.94
TRAF3IP2-201ENST00000340026 ZNF585AQ6P3V2 769 aa9.18□□□□□ -0.94
TRAF3IP2-201ENST00000340026 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.18□□□□□ -0.94
TRAF3IP2-201ENST00000340026 C1orf162Q8NEQ5 155 aaPredicted RBP9.18□□□□□ -0.94
TRAF3IP2-201ENST00000340026 OR4D5Q8NGN0 318 aa9.18□□□□□ -0.94
TRAF3IP2-201ENST00000340026 MRPL24Q96A35 216 aaKnown RBP9.18□□□□□ -0.94
TRAF3IP2-201ENST00000340026 C1QTNF6Q9BXI9 259 aa9.18□□□□□ -0.94
TRAF3IP2-201ENST00000340026 OR51I2Q9H344 312 aa9.18□□□□□ -0.94
TRAF3IP2-201ENST00000340026 C11orf1Q9H5F2 150 aa9.18□□□□□ -0.94
TRAF3IP2-201ENST00000340026 PLATP00750 562 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 TK1P04183 234 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 MMP9P14780 707 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 AADACP22760 399 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 CCDC157Q569K6 752 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 UNQ6126/PRO20091Q6UXV3 157 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 MOB1BQ7L9L4 216 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 TMEM222Q9H0R3 208 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 CARHSP1Q9Y2V2 147 aaKnown RBP9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 SPEF1Q9Y4P9 236 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 FREM1Q5H8C1 2179 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 CFAP54Q96N23 3096 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 COL6A3P12111 3177 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 LOC105371267A0A1B0GV96 52 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 LRP5LA4QPB2 252 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 J3QT63 122 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 AQP7O14520 342 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 MPPED1O15442 326 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 GNRHRP30968 328 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 GPM6AP51674 278 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 GABRA6Q16445 453 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 TBC1D28Q2M2D7 210 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 MST1LQ2TV78 715 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 SPAG16Q8N0X2 631 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 BHLHE23Q8NDY6 225 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 OR4A4PQ8NGN8 299 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 OR1S2Q8NGQ3 325 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 SLAMF9Q96A28 289 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 PARP11Q9NR21 331 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 PRR13Q9NZ81 148 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 PRSS50Q9UI38 385 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 R4GN57 208 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 MED13Q9UHV7 2174 aa9.17□□□□□ -0.94
TRAF3IP2-201ENST00000340026 AHCTF1Q8WYP5 2266 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 VPS13AQ96RL7 3174 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 FRYLO94915 3013 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 TMEM218A2RU14 115 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 GPR31O00270 319 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 GPR137BO60478 399 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 NGFP01138 241 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 MBPP02686 304 aaPredicted RBP9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 SLC25A6P12236 298 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 SELEP16581 610 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 ERVK11-1P61568 191 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 BLOC1S1P78537 153 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 ARG2P78540 354 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 TGFBR3Q03167 851 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 MRPL49Q13405 166 aaKnown RBP9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 TGIF1Q15583 401 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 INO80CQ6PI98 192 aaPredicted RBP9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 C1orf174Q8IYL3 243 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 SPIN2AQ99865 258 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 SPIN2BQ9BPZ2 258 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 TAF9BQ9HBM6 251 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 CRIM1Q9NZV1 1036 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 C3orf85A0A1B0GTC6 90 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 C1QTNF9BB2RNN3 333 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 SEC11BP0C7V7 166 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 COX5AP20674 150 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 UCP1P25874 307 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 PJVKQ0ZLH3 352 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 RNFT1Q5M7Z0 435 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 TOMM40LQ969M1 308 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 ASCL3Q9NQ33 180 aa9.16□□□□□ -0.94
TRAF3IP2-201ENST00000340026 MUC3AQ02505 3323 aa9.15□□□□□ -0.94
TRAF3IP2-201ENST00000340026 TMEM210A6NLX4 147 aa9.15□□□□□ -0.94
TRAF3IP2-201ENST00000340026 DEGS1O15121 323 aa9.15□□□□□ -0.94
TRAF3IP2-201ENST00000340026 SCO1O75880 301 aa9.15□□□□□ -0.94
TRAF3IP2-201ENST00000340026 RAC2P15153 192 aa9.15□□□□□ -0.94
TRAF3IP2-201ENST00000340026 UCP2P55851 309 aa9.15□□□□□ -0.94
TRAF3IP2-201ENST00000340026 ZNF273Q14593 569 aa9.15□□□□□ -0.94
TRAF3IP2-201ENST00000340026 MDP1Q86V88 176 aa9.15□□□□□ -0.94
TRAF3IP2-201ENST00000340026 COMMD1Q8N668 190 aa9.15□□□□□ -0.94
TRAF3IP2-201ENST00000340026 BPIFCQ8NFQ6 507 aa9.15□□□□□ -0.94
TRAF3IP2-201ENST00000340026 MRPL30Q8TCC3 161 aaKnown RBP9.15□□□□□ -0.94
TRAF3IP2-201ENST00000340026 DYRK2Q92630 601 aa9.15□□□□□ -0.94
TRAF3IP2-201ENST00000340026 GINS3Q9BRX5 216 aa9.15□□□□□ -0.94
TRAF3IP2-201ENST00000340026 GSKIPQ9P0R6 139 aa9.15□□□□□ -0.94
TRAF3IP2-201ENST00000340026 A0A1B0GWJ7 208 aa9.15□□□□□ -0.95
TRAF3IP2-201ENST00000340026 IQCF6A8MYZ5 107 aa9.15□□□□□ -0.95
TRAF3IP2-201ENST00000340026 LGALS8O00214 317 aa9.15□□□□□ -0.95
TRAF3IP2-201ENST00000340026 ST8SIA3O43173 380 aa9.15□□□□□ -0.95
TRAF3IP2-201ENST00000340026 CEACAM4O75871 244 aa9.15□□□□□ -0.95
TRAF3IP2-201ENST00000340026 RAB5CP51148 216 aa9.15□□□□□ -0.95
TRAF3IP2-201ENST00000340026 PRSS12P56730 875 aa9.15□□□□□ -0.95
TRAF3IP2-201ENST00000340026 S100A10P60903 97 aa9.15□□□□□ -0.95
TRAF3IP2-201ENST00000340026 HERPUD1Q15011 391 aa9.15□□□□□ -0.95
TRAF3IP2-201ENST00000340026 PCSK4Q6UW60 755 aa9.15□□□□□ -0.95
TRAF3IP2-201ENST00000340026 Q6ZT83 130 aa9.15□□□□□ -0.95
TRAF3IP2-201ENST00000340026 FAM58AQ8N1B3 248 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms