RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 SVBPQ8N300 66 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 INO80EQ8NBZ0 244 aaPredicted RBP13.67□□□□□ -0.22
PDGFB-201ENST00000331163 KCNG3Q8TAE7 436 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 TMED6Q8WW62 240 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 HAVCR1Q96D42 359 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 FLNCQ14315 2725 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 NPIPB13A6NJU9 1138 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 NPIPB4C9JG80 1138 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 GEMIN2O14893 280 aaKnown RBP13.67□□□□□ -0.22
PDGFB-201ENST00000331163 CRYBA1P05813 215 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 VSIG8P0DPA2 414 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 RPA2P15927 270 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 ALDH3B1P43353 468 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 UCP2P55851 309 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 EDDM3BP56851 147 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 STEAP1BQ6NZ63 245 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 RBMS3Q6XE24 437 aaKnown RBP13.67□□□□□ -0.22
PDGFB-201ENST00000331163 PNRC2Q9NPJ4 139 aaKnown RBP13.67□□□□□ -0.22
PDGFB-201ENST00000331163 CLCF1Q9UBD9 225 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 HMSDA8MTL9 139 aa13.66□□□□□ -0.22
PDGFB-201ENST00000331163 ZNF736B4DX44 427 aaPredicted RBP13.66□□□□□ -0.22
PDGFB-201ENST00000331163 SYNGR1O43759 233 aa13.66□□□□□ -0.22
PDGFB-201ENST00000331163 AKAIN1P0CW23 69 aa13.66□□□□□ -0.22
PDGFB-201ENST00000331163 GRNP28799 593 aaKnown RBP13.66□□□□□ -0.22
PDGFB-201ENST00000331163 OR14K1Q8NGZ2 314 aa13.66□□□□□ -0.22
PDGFB-201ENST00000331163 OR4K15Q8NH41 348 aa13.66□□□□□ -0.22
PDGFB-201ENST00000331163 PPP1R1CQ8WVI7 109 aa13.66□□□□□ -0.22
PDGFB-201ENST00000331163 CCL17Q92583 94 aa13.66□□□□□ -0.22
PDGFB-201ENST00000331163 BCL2L2Q92843 193 aaPredicted RBP13.66□□□□□ -0.22
PDGFB-201ENST00000331163 USP24Q9UPU5 2620 aa13.66□□□□□ -0.22
PDGFB-201ENST00000331163 H0YL77 283 aa13.66□□□□□ -0.22
PDGFB-201ENST00000331163 OR4E1P0C645 316 aa13.66□□□□□ -0.22
PDGFB-201ENST00000331163 UBBP0CG47 229 aa13.66□□□□□ -0.22
PDGFB-201ENST00000331163 RPS27AP62979 156 aaKnown RBP13.66□□□□□ -0.22
PDGFB-201ENST00000331163 UBA52P62987 128 aaKnown RBP13.66□□□□□ -0.22
PDGFB-201ENST00000331163 LRP11Q86VZ4 500 aa13.66□□□□□ -0.22
PDGFB-201ENST00000331163 Q8NA96 180 aa13.66□□□□□ -0.22
PDGFB-201ENST00000331163 PARP12Q9H0J9 701 aaKnown RBP13.66□□□□□ -0.22
PDGFB-201ENST00000331163 ZNF581Q9P0T4 197 aa13.66□□□□□ -0.22
PDGFB-201ENST00000331163 KMT2EQ8IZD2 1858 aa13.66□□□□□ -0.22
PDGFB-201ENST00000331163 CTAG2O75638 210 aa13.66□□□□□ -0.22
PDGFB-201ENST00000331163 MPV17P39210 176 aa13.66□□□□□ -0.22
PDGFB-201ENST00000331163 NPBWR1P48145 328 aa13.66□□□□□ -0.22
PDGFB-201ENST00000331163 SMCO1Q147U7 214 aa13.66□□□□□ -0.22
PDGFB-201ENST00000331163 OR8B8Q15620 311 aa13.66□□□□□ -0.22
PDGFB-201ENST00000331163 GABRA6Q16445 453 aa13.66□□□□□ -0.22
PDGFB-201ENST00000331163 RSPO1Q2MKA7 263 aaPredicted RBP13.66□□□□□ -0.22
PDGFB-201ENST00000331163 MRGPRGQ86SM5 289 aa13.66□□□□□ -0.22
PDGFB-201ENST00000331163 CALHM1Q8IU99 346 aa13.66□□□□□ -0.22
PDGFB-201ENST00000331163 TLNRD1Q9H1K6 362 aa13.66□□□□□ -0.22
PDGFB-201ENST00000331163 IGKV1-9A0A0C4DH69 117 aa13.65□□□□□ -0.22
PDGFB-201ENST00000331163 CTDSPLO15194 276 aa13.65□□□□□ -0.22
PDGFB-201ENST00000331163 IGHG3P01860 377 aa13.65□□□□□ -0.22
PDGFB-201ENST00000331163 IL5P05113 134 aa13.65□□□□□ -0.22
PDGFB-201ENST00000331163 CD53P19397 219 aa13.65□□□□□ -0.22
PDGFB-201ENST00000331163 RAB40AQ8WXH6 277 aa13.65□□□□□ -0.22
PDGFB-201ENST00000331163 PRDM14Q9GZV8 571 aa13.65□□□□□ -0.22
PDGFB-201ENST00000331163 SLC25A32Q9H2D1 315 aa13.65□□□□□ -0.22
PDGFB-201ENST00000331163 DKK4Q9UBT3 224 aa13.65□□□□□ -0.22
PDGFB-201ENST00000331163 IGHV3OR15-7A0A075B7D8 119 aa13.65□□□□□ -0.22
PDGFB-201ENST00000331163 TRBV5-5A0A0J9YX44 114 aa13.65□□□□□ -0.22
PDGFB-201ENST00000331163 HOXA1P49639 335 aaPredicted RBP13.65□□□□□ -0.22
PDGFB-201ENST00000331163 HIST3H3Q16695 136 aa13.65□□□□□ -0.22
PDGFB-201ENST00000331163 RTL6Q6ICC9 239 aa13.65□□□□□ -0.22
PDGFB-201ENST00000331163 NKAIN3Q8N8D7 197 aa13.65□□□□□ -0.22
PDGFB-201ENST00000331163 RNASE11Q8TAA1 199 aaKnown RBP13.65□□□□□ -0.22
PDGFB-201ENST00000331163 RFESDQ8TAC1 157 aa13.65□□□□□ -0.22
PDGFB-201ENST00000331163 RASL12Q9NYN1 266 aa13.65□□□□□ -0.22
PDGFB-201ENST00000331163 CRIM1Q9NZV1 1036 aa13.65□□□□□ -0.22
PDGFB-201ENST00000331163 PTPRBP23467 1997 aa13.65□□□□□ -0.22
PDGFB-201ENST00000331163 OR5H1A6NKK0 313 aa13.65□□□□□ -0.23
PDGFB-201ENST00000331163 GNLYP22749 145 aa13.65□□□□□ -0.23
PDGFB-201ENST00000331163 GLRX2Q9NS18 164 aa13.65□□□□□ -0.23
PDGFB-201ENST00000331163 TAAR3PQ9P1P4 343 aa13.65□□□□□ -0.23
PDGFB-201ENST00000331163 NDRG3Q9UGV2 375 aa13.65□□□□□ -0.23
PDGFB-201ENST00000331163 MALRD1Q5VYJ5 2156 aa13.64□□□□□ -0.23
PDGFB-201ENST00000331163 CHD6Q8TD26 2715 aa13.64□□□□□ -0.23
PDGFB-201ENST00000331163 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.64□□□□□ -0.23
PDGFB-201ENST00000331163 WNT5AP41221 380 aa13.64□□□□□ -0.23
PDGFB-201ENST00000331163 NPY4RP50391 375 aa13.64□□□□□ -0.23
PDGFB-201ENST00000331163 C5orf24Q7Z6I8 188 aa13.64□□□□□ -0.23
PDGFB-201ENST00000331163 KLF14Q8TD94 323 aaPredicted RBP13.64□□□□□ -0.23
PDGFB-201ENST00000331163 SFT2D1Q8WV19 159 aa13.64□□□□□ -0.23
PDGFB-201ENST00000331163 KCNJ16Q9NPI9 418 aa13.64□□□□□ -0.23
PDGFB-201ENST00000331163 TMEM100Q9NV29 134 aa13.64□□□□□ -0.23
PDGFB-201ENST00000331163 EHFQ9NZC4 300 aa13.64□□□□□ -0.23
PDGFB-201ENST00000331163 HECTD1Q9ULT8 2610 aa13.64□□□□□ -0.23
PDGFB-201ENST00000331163 IGKV3D-15A0A087WSY6 115 aa13.64□□□□□ -0.23
PDGFB-201ENST00000331163 TRAV14DV4A0A0A6YYC5 116 aa13.64□□□□□ -0.23
PDGFB-201ENST00000331163 TMEM218A2RU14 115 aa13.64□□□□□ -0.23
PDGFB-201ENST00000331163 RFPL4AA6NLU0 287 aa13.64□□□□□ -0.23
PDGFB-201ENST00000331163 RFPL4AL1F8VTS6 287 aa13.64□□□□□ -0.23
PDGFB-201ENST00000331163 RHBDL1O75783 438 aa13.64□□□□□ -0.23
PDGFB-201ENST00000331163 SFTPBP07988 381 aa13.64□□□□□ -0.23
PDGFB-201ENST00000331163 SLC36A1Q7Z2H8 476 aa13.64□□□□□ -0.23
PDGFB-201ENST00000331163 TMEM200AQ86VY9 491 aa13.64□□□□□ -0.23
PDGFB-201ENST00000331163 PP6455Q8WZ26 134 aa13.64□□□□□ -0.23
PDGFB-201ENST00000331163 FOXRED1Q96CU9 486 aaPredicted RBP13.64□□□□□ -0.23
PDGFB-201ENST00000331163 PIK3IP1Q96FE7 263 aa13.64□□□□□ -0.23
PDGFB-201ENST00000331163 IGSF10Q6WRI0 2623 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms