RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 CSF1P09603 554 aa12.81□□□□□ -0.36
HOXA3-201ENST00000317201 EDNRAP25101 427 aa12.81□□□□□ -0.36
HOXA3-201ENST00000317201 GDF1P27539 372 aa12.81□□□□□ -0.36
HOXA3-201ENST00000317201 EFNB2P52799 333 aa12.81□□□□□ -0.36
HOXA3-201ENST00000317201 ELLP55199 621 aaPredicted RBP12.81□□□□□ -0.36
HOXA3-201ENST00000317201 GGNQ86UU5 652 aa12.81□□□□□ -0.36
HOXA3-201ENST00000317201 GCNT2Q8N0V5 402 aa12.81□□□□□ -0.36
HOXA3-201ENST00000317201 PGAM5Q96HS1 289 aa12.81□□□□□ -0.36
HOXA3-201ENST00000317201 ZNF703Q9H7S9 590 aaPredicted RBP12.81□□□□□ -0.36
HOXA3-201ENST00000317201 METTL8Q9H825 291 aaKnown RBP12.81□□□□□ -0.36
HOXA3-201ENST00000317201 RAB22AQ9UL26 194 aa12.81□□□□□ -0.36
HOXA3-201ENST00000317201 POLR3KQ9Y2Y1 108 aaPredicted RBP12.81□□□□□ -0.36
HOXA3-201ENST00000317201 V9GYS6 101 aa12.81□□□□□ -0.36
HOXA3-201ENST00000317201 PINLYPA6NC86 204 aa12.8□□□□□ -0.36
HOXA3-201ENST00000317201 OPN1LWP04000 364 aa12.8□□□□□ -0.36
HOXA3-201ENST00000317201 ZNF133P52736 654 aaPredicted RBP12.8□□□□□ -0.36
HOXA3-201ENST00000317201 ADAM8P78325 824 aa12.8□□□□□ -0.36
HOXA3-201ENST00000317201 ATP6V1FQ16864 119 aa12.8□□□□□ -0.36
HOXA3-201ENST00000317201 UNQ9370/PRO34162Q6UXP9 181 aa12.8□□□□□ -0.36
HOXA3-201ENST00000317201 LHFPL4Q7Z7J7 247 aa12.8□□□□□ -0.36
HOXA3-201ENST00000317201 GABRG1Q8N1C3 465 aa12.8□□□□□ -0.36
HOXA3-201ENST00000317201 HAS2Q92819 552 aa12.8□□□□□ -0.36
HOXA3-201ENST00000317201 H0YL77 283 aa12.8□□□□□ -0.36
HOXA3-201ENST00000317201 LCATP04180 440 aa12.8□□□□□ -0.36
HOXA3-201ENST00000317201 SP1P08047 785 aa12.8□□□□□ -0.36
HOXA3-201ENST00000317201 HKR1P10072 659 aa12.8□□□□□ -0.36
HOXA3-201ENST00000317201 ZNF823P16415 610 aa12.8□□□□□ -0.36
HOXA3-201ENST00000317201 AKR1C4P17516 323 aa12.8□□□□□ -0.36
HOXA3-201ENST00000317201 IDH3GP51553 393 aaPredicted RBP12.8□□□□□ -0.36
HOXA3-201ENST00000317201 CLRN1P58418 232 aa12.8□□□□□ -0.36
HOXA3-201ENST00000317201 SLC22A25Q6T423 547 aa12.8□□□□□ -0.36
HOXA3-201ENST00000317201 YRDCQ86U90 279 aaKnown RBP12.8□□□□□ -0.36
HOXA3-201ENST00000317201 WDFY1Q8IWB7 410 aa12.8□□□□□ -0.36
HOXA3-201ENST00000317201 SULF2Q8IWU5 870 aa12.8□□□□□ -0.36
HOXA3-201ENST00000317201 ZNF679Q8IYX0 411 aa12.8□□□□□ -0.36
HOXA3-201ENST00000317201 C17orf78Q8N4C9 275 aa12.8□□□□□ -0.36
HOXA3-201ENST00000317201 OR51F2Q8NH61 342 aa12.8□□□□□ -0.36
HOXA3-201ENST00000317201 ZNF2Q9BSG1 426 aaPredicted RBP12.8□□□□□ -0.36
HOXA3-201ENST00000317201 CST11Q9H112 138 aa12.8□□□□□ -0.36
HOXA3-201ENST00000317201 ZMAT3Q9HA38 289 aaKnown RBP12.8□□□□□ -0.36
HOXA3-201ENST00000317201 ZNF281Q9Y2X9 895 aa12.8□□□□□ -0.36
HOXA3-201ENST00000317201 KNTC1P50748 2209 aa12.8□□□□□ -0.36
HOXA3-201ENST00000317201 KLRC4-KLRK1H3BQV0 150 aa12.79□□□□□ -0.36
HOXA3-201ENST00000317201 SUCLG1P53597 346 aaKnown RBP12.79□□□□□ -0.36
HOXA3-201ENST00000317201 RPS11P62280 158 aaKnown RBP eCLIP12.79□□□□□ -0.36
HOXA3-201ENST00000317201 IL13RA1P78552 427 aa12.79□□□□□ -0.36
HOXA3-201ENST00000317201 SLC25A47Q6Q0C1 308 aa12.79□□□□□ -0.36
HOXA3-201ENST00000317201 TMEM183AQ8IXX5 376 aa12.79□□□□□ -0.36
HOXA3-201ENST00000317201 RNF2Q99496 336 aa12.79□□□□□ -0.36
HOXA3-201ENST00000317201 CSTL1Q9H114 145 aa12.79□□□□□ -0.36
HOXA3-201ENST00000317201 SLC35B3Q9H1N7 401 aa12.79□□□□□ -0.36
HOXA3-201ENST00000317201 PARP11Q9NR21 331 aa12.79□□□□□ -0.36
HOXA3-201ENST00000317201 PITPNC1Q9UKF7 332 aa12.79□□□□□ -0.36
HOXA3-201ENST00000317201 V9GY05 133 aa12.79□□□□□ -0.36
HOXA3-201ENST00000317201 CFAP54Q96N23 3096 aa12.79□□□□□ -0.36
HOXA3-201ENST00000317201 ZNF705FA8MVS1 300 aaPredicted RBP12.79□□□□□ -0.36
HOXA3-201ENST00000317201 HPRT1P00492 218 aa12.79□□□□□ -0.36
HOXA3-201ENST00000317201 ZNF705DP0CH99 300 aaPredicted RBP12.79□□□□□ -0.36
HOXA3-201ENST00000317201 ZNF705BP0CI00 300 aaPredicted RBP12.79□□□□□ -0.36
HOXA3-201ENST00000317201 SOX2P48431 317 aa12.79□□□□□ -0.36
HOXA3-201ENST00000317201 SULT1A2P50226 295 aa12.79□□□□□ -0.36
HOXA3-201ENST00000317201 SELENOTP62341 195 aa12.79□□□□□ -0.36
HOXA3-201ENST00000317201 PMS2P11Q13670 270 aa12.79□□□□□ -0.36
HOXA3-201ENST00000317201 SLC17A1Q14916 467 aa12.79□□□□□ -0.36
HOXA3-201ENST00000317201 EIF5AL1Q6IS14 154 aaKnown RBP12.79□□□□□ -0.36
HOXA3-201ENST00000317201 LINC00696Q6ZRV3 163 aa12.79□□□□□ -0.36
HOXA3-201ENST00000317201 ASCL5Q7RTU5 278 aa12.79□□□□□ -0.36
HOXA3-201ENST00000317201 COMMD1Q8N668 190 aa12.79□□□□□ -0.36
HOXA3-201ENST00000317201 OR2V1Q8NHB1 315 aa12.79□□□□□ -0.36
HOXA3-201ENST00000317201 THRSPQ92748 146 aa12.79□□□□□ -0.36
HOXA3-201ENST00000317201 UPB1Q9UBR1 384 aa12.79□□□□□ -0.36
HOXA3-201ENST00000317201 ZNF320A2RRD8 509 aa12.78□□□□□ -0.36
HOXA3-201ENST00000317201 TNFSF11O14788 317 aa12.78□□□□□ -0.36
HOXA3-201ENST00000317201 TRAPPC6AO75865 159 aa12.78□□□□□ -0.36
HOXA3-201ENST00000317201 BPNT1O95861 308 aa12.78□□□□□ -0.36
HOXA3-201ENST00000317201 FMODQ06828 376 aa12.78□□□□□ -0.36
HOXA3-201ENST00000317201 NUFIP2Q7Z417 695 aaKnown RBP12.78□□□□□ -0.36
HOXA3-201ENST00000317201 SUMF2Q8NBJ7 301 aa12.78□□□□□ -0.36
HOXA3-201ENST00000317201 OR9K2Q8NGE7 335 aa12.78□□□□□ -0.36
HOXA3-201ENST00000317201 OR52N5Q8NH56 324 aa12.78□□□□□ -0.36
HOXA3-201ENST00000317201 RNF128Q8TEB7 428 aa12.78□□□□□ -0.36
HOXA3-201ENST00000317201 EMC6Q9BV81 110 aa12.78□□□□□ -0.36
HOXA3-201ENST00000317201 SCRT1Q9BWW7 348 aa12.78□□□□□ -0.36
HOXA3-201ENST00000317201 CNTNAP3Q9BZ76 1288 aa12.78□□□□□ -0.36
HOXA3-201ENST00000317201 H3BQ15 152 aa12.78□□□□□ -0.36
HOXA3-201ENST00000317201 GCGP01275 180 aa12.78□□□□□ -0.36
HOXA3-201ENST00000317201 TK1P04183 234 aa12.78□□□□□ -0.36
HOXA3-201ENST00000317201 OR5H8P0DN80 308 aa12.78□□□□□ -0.36
HOXA3-201ENST00000317201 CD33P20138 364 aa12.78□□□□□ -0.36
HOXA3-201ENST00000317201 CHATP28329 748 aa12.78□□□□□ -0.36
HOXA3-201ENST00000317201 WIPI1Q5MNZ9 446 aaPredicted RBP12.78□□□□□ -0.36
HOXA3-201ENST00000317201 C1orf194Q5T5A4 169 aa12.78□□□□□ -0.36
HOXA3-201ENST00000317201 OR8G2PQ6IF36 304 aa12.78□□□□□ -0.36
HOXA3-201ENST00000317201 MRGPRDQ8TDS7 321 aa12.78□□□□□ -0.36
HOXA3-201ENST00000317201 TMEM54Q969K7 222 aa12.78□□□□□ -0.36
HOXA3-201ENST00000317201 TTTY12Q9BZ98 90 aa12.78□□□□□ -0.36
HOXA3-201ENST00000317201 IKZF2Q9UKS7 526 aa12.78□□□□□ -0.36
HOXA3-201ENST00000317201 VSIG4Q9Y279 399 aa12.78□□□□□ -0.36
HOXA3-201ENST00000317201 LOC105371242A0A075B767 164 aa12.77□□□□□ -0.36
HOXA3-201ENST00000317201 TMEM212A6NML5 194 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms