RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 NCKAP5O14513 1909 aa14.88□□□□□ -0.03
SCAMP4-201ENST00000316097 URB1O60287 2271 aaKnown RBP14.88□□□□□ -0.03
SCAMP4-201ENST00000316097 A0A0J9YW62 118 aa14.88□□□□□ -0.03
SCAMP4-201ENST00000316097 OR52M1Q8NGK5 317 aa14.88□□□□□ -0.03
SCAMP4-201ENST00000316097 OR14K1Q8NGZ2 314 aa14.88□□□□□ -0.03
SCAMP4-201ENST00000316097 PIGQQ9BRB3 760 aa14.88□□□□□ -0.03
SCAMP4-201ENST00000316097 PLEKHJ1Q9NW61 149 aa14.88□□□□□ -0.03
SCAMP4-201ENST00000316097 FRYQ5TBA9 3013 aa14.88□□□□□ -0.03
SCAMP4-201ENST00000316097 H3BQ15 152 aa14.88□□□□□ -0.03
SCAMP4-201ENST00000316097 K7N7A8 449 aa14.88□□□□□ -0.03
SCAMP4-201ENST00000316097 NEURL1O76050 574 aa14.88□□□□□ -0.03
SCAMP4-201ENST00000316097 CXCL1P09341 107 aa14.88□□□□□ -0.03
SCAMP4-201ENST00000316097 OR5H8P0DN80 308 aa14.88□□□□□ -0.03
SCAMP4-201ENST00000316097 FOSL1P15407 271 aa14.88□□□□□ -0.03
SCAMP4-201ENST00000316097 TAGLN2P37802 199 aaKnown RBP14.88□□□□□ -0.03
SCAMP4-201ENST00000316097 CCL20P78556 96 aa14.88□□□□□ -0.03
SCAMP4-201ENST00000316097 PDZD11Q5EBL8 140 aa14.88□□□□□ -0.03
SCAMP4-201ENST00000316097 THEM4Q5T1C6 240 aa14.88□□□□□ -0.03
SCAMP4-201ENST00000316097 GPR157Q5UAW9 335 aa14.88□□□□□ -0.03
SCAMP4-201ENST00000316097 SPNS3Q6ZMD2 512 aa14.88□□□□□ -0.03
SCAMP4-201ENST00000316097 ZNF610Q8N9Z0 462 aa14.88□□□□□ -0.03
SCAMP4-201ENST00000316097 RAB39BQ96DA2 213 aa14.88□□□□□ -0.03
SCAMP4-201ENST00000316097 LRFN3Q9BTN0 628 aa14.88□□□□□ -0.03
SCAMP4-201ENST00000316097 MRPL13Q9BYD1 178 aaKnown RBP14.88□□□□□ -0.03
SCAMP4-201ENST00000316097 NELFAQ9H3P2 528 aa14.88□□□□□ -0.03
SCAMP4-201ENST00000316097 PTPRZ1P23471 2315 aaPredicted RBP14.87□□□□□ -0.03
SCAMP4-201ENST00000316097 TRAF3IP2O43734 574 aaPredicted RBP14.87□□□□□ -0.03
SCAMP4-201ENST00000316097 FCGR2AP12318 317 aa14.87□□□□□ -0.03
SCAMP4-201ENST00000316097 CCL1P22362 96 aa14.87□□□□□ -0.03
SCAMP4-201ENST00000316097 TMEM187Q14656 261 aa14.87□□□□□ -0.03
SCAMP4-201ENST00000316097 ABHD17BQ5VST6 288 aa14.87□□□□□ -0.03
SCAMP4-201ENST00000316097 FBXW12Q6X9E4 464 aa14.87□□□□□ -0.03
SCAMP4-201ENST00000316097 Q8WTZ3 238 aa14.87□□□□□ -0.03
SCAMP4-201ENST00000316097 CUL9Q8IWT3 2517 aa14.87□□□□□ -0.03
SCAMP4-201ENST00000316097 RRP8O43159 456 aaKnown RBP14.87□□□□□ -0.03
SCAMP4-201ENST00000316097 CELA3AP09093 270 aa14.87□□□□□ -0.03
SCAMP4-201ENST00000316097 ZNF43P17038 809 aa14.87□□□□□ -0.03
SCAMP4-201ENST00000316097 FXYD4P59646 89 aa14.87□□□□□ -0.03
SCAMP4-201ENST00000316097 ABCA11PQ4W5N1 156 aa14.87□□□□□ -0.03
SCAMP4-201ENST00000316097 NOXO1Q8NFA2 376 aa14.87□□□□□ -0.03
SCAMP4-201ENST00000316097 RTN4IP1Q8WWV3 396 aaPredicted RBP14.87□□□□□ -0.03
SCAMP4-201ENST00000316097 PIGTQ969N2 578 aa14.87□□□□□ -0.03
SCAMP4-201ENST00000316097 S100PBPQ96BU1 408 aa14.87□□□□□ -0.03
SCAMP4-201ENST00000316097 ABHD14AQ9BUJ0 271 aa14.87□□□□□ -0.03
SCAMP4-201ENST00000316097 PRDM13Q9H4Q3 707 aa14.87□□□□□ -0.03
SCAMP4-201ENST00000316097 NAA60Q9H7X0 242 aa14.87□□□□□ -0.03
SCAMP4-201ENST00000316097 GFOD1Q9NXC2 390 aa14.87□□□□□ -0.03
SCAMP4-201ENST00000316097 ANXA10Q9UJ72 324 aa14.87□□□□□ -0.03
SCAMP4-201ENST00000316097 BOD1L1Q8NFC6 3051 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 ARGFXA6NJG6 315 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 CDRT15L2A8MXV6 281 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 RNF224P0DH78 156 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 RRADP55042 308 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 B3GALT5-AS1P59052 145 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 SSTP61278 116 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 PHLDA2Q53GA4 152 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 LRRC18Q8N456 261 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 GALNT14Q96FL9 552 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 PGAM5Q96HS1 289 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 ZNF385AQ96PM9 386 aaKnown RBP14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 SRXN1Q9BYN0 137 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 PNRC2Q9NPJ4 139 aaKnown RBP14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 GVINP1Q7Z2Y8 2422 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 A0A087WZY1 265 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 A0A1W2PNV4 684 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 RBFOX3A6NFN3 312 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 H0YL77 283 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 MSTNO14793 375 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 GDF1P27539 372 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 OPRM1P35372 400 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 CLDN17P56750 224 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 UBE2KP61086 200 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 ELOBQ15370 118 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 UBE2V2Q15819 145 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 HAGHQ16775 308 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 HIKESHIQ53FT3 197 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 GFI1BQ5VTD9 330 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 C14orf144Q96I85 54 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 TM2D1Q9BX74 207 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 RTTNQ86VV8 2226 aa14.86□□□□□ -0.03
SCAMP4-201ENST00000316097 A0A1B0GW64 132 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 AQP7P3A6NL99 342 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 ZNF850A8MQ14 1090 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 NKX2-8O15522 239 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 IGHG1P01857 330 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 PGA4P0DJD7 388 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 PGA3P0DJD8 388 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 ZNF728P0DKX0 622 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 FAHP16930 419 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 ZFP62Q8NB50 900 aaPredicted RBP14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 OR5L1Q8NGL2 311 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 SGK3Q96BR1 496 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 UFSP2Q9NUQ7 469 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 SPTBN2O15020 2390 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 AKAP13Q12802 2813 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 A0A1B0GV90 55 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 ST8SIA3O43173 380 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 HIST1H2BKO60814 126 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 HIST1H2BJP06899 126 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 HIST1H2BOP23527 126 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms