RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 LIN7BQ9HAP6 207 aa14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 RCC2Q9P258 522 aaKnown RBP14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 CSPG4Q6UVK1 2322 aa14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 MALRD1Q5VYJ5 2156 aa14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 ABCA1O95477 2261 aa14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 CR1P17927 2039 aa14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 hCG_1809904A0A1W2PP81 198 aa14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 A0A1W2PPE2 198 aa14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 A0A1W2PR64 198 aa14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 A0A1W2PRV1 198 aa14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 SIRPB1O00241 398 aa14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 CA11O75493 328 aa14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 SELLP14151 372 aa14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 FUT3P21217 361 aa14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 OR3A1P47881 315 aa14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 RPL31P62899 125 aaKnown RBP14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 MXD1Q05195 221 aa14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 SCN1BQ07699 218 aa14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 TAF9Q16594 264 aa14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 CTF1Q16619 201 aa14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 C2orf76Q3KRA6 126 aa14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 LY6G5BQ8NDX9 201 aa14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 OR51D1Q8NGF3 324 aa14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 FAM46BQ96A09 425 aa14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 KCTD12Q96CX2 325 aaKnown RBP14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 BANF2Q9H503 90 aa14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 YAE1D1Q9NRH1 226 aa14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 DAPK2Q9UIK4 370 aa14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 ETV7Q9Y603 341 aa14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 KPTNQ9Y664 436 aa14.82□□□□□ -0.04
SSSCA1-201ENST00000309328 A0A1B0GW55 424 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 A0A1W2PP11 408 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 A0A1W2PQ09 198 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 hADV38S2A0JD32 116 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 TMEM82A0PJX8 343 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 METTL21EPA6NDL7 271 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 C22orf46C9J442 243 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 MCRIP1C9JLW8 97 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 LDLRAD4O15165 306 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 PSPNO60542 156 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 DUX4L2P0CJ85 424 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 DUX4L3P0CJ86 424 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 DUX4L4P0CJ87 422 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 DUX4L5P0CJ88 424 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 DUX4L6P0CJ89 424 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 DUX4L7P0CJ90 424 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 SERPINB10P48595 397 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 LSM3P62310 102 aaKnown RBP14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 PAX8Q06710 450 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 DYNC1I2Q13409 638 aaKnown RBP14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 UNC119Q13432 240 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 BLMHQ13867 455 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 DUX4L9Q6RFH8 374 aaPredicted RBP14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 C1orf122Q6ZSJ8 110 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 NR2C2APQ86WQ0 139 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 CLVS1Q8IUQ0 354 aaPredicted RBP14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 OR56B1Q8NGI3 324 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 SLC25A46Q96AG3 418 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 NEDD4LQ96PU5 975 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 DPCDQ9BVM2 203 aaPredicted RBP14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 RNF167Q9H6Y7 350 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 ABRACLQ9P1F3 81 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 DUX4Q9UBX2 424 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 METRNQ9UJH8 293 aa14.81□□□□□ -0.04
SSSCA1-201ENST00000309328 MED13LQ71F56 2210 aa14.8□□□□□ -0.04
SSSCA1-201ENST00000309328 HIVEP2P31629 2446 aa14.8□□□□□ -0.04
SSSCA1-201ENST00000309328 TRAV24A0A0B4J272 114 aa14.8□□□□□ -0.04
SSSCA1-201ENST00000309328 M0R1W7 72 aa14.8□□□□□ -0.04
SSSCA1-201ENST00000309328 PDCD6O75340 191 aa14.8□□□□□ -0.04
SSSCA1-201ENST00000309328 P2RX3P56373 397 aa14.8□□□□□ -0.04
SSSCA1-201ENST00000309328 CLDN12P56749 244 aa14.8□□□□□ -0.04
SSSCA1-201ENST00000309328 VBP1P61758 197 aa14.8□□□□□ -0.04
SSSCA1-201ENST00000309328 NCS1P62166 190 aa14.8□□□□□ -0.04
SSSCA1-201ENST00000309328 SCGB2A2Q13296 93 aa14.8□□□□□ -0.04
SSSCA1-201ENST00000309328 ARL6IP1Q15041 203 aa14.8□□□□□ -0.04
SSSCA1-201ENST00000309328 ATAD3CQ5T2N8 411 aa14.8□□□□□ -0.04
SSSCA1-201ENST00000309328 METTL11BQ5VVY1 283 aa14.8□□□□□ -0.04
SSSCA1-201ENST00000309328 FAHD2BQ6P2I3 314 aaPredicted RBP14.8□□□□□ -0.04
SSSCA1-201ENST00000309328 FAM89BQ8N5H3 189 aa14.8□□□□□ -0.04
SSSCA1-201ENST00000309328 SUMF2Q8NBJ7 301 aa14.8□□□□□ -0.04
SSSCA1-201ENST00000309328 AP3S1Q92572 193 aa14.8□□□□□ -0.04
SSSCA1-201ENST00000309328 FAHD2AQ96GK7 314 aa14.8□□□□□ -0.04
SSSCA1-201ENST00000309328 C7orf69Q9H7B7 122 aa14.8□□□□□ -0.04
SSSCA1-201ENST00000309328 MMP26Q9NRE1 261 aa14.8□□□□□ -0.04
SSSCA1-201ENST00000309328 OR6C3Q9NZP0 311 aa14.8□□□□□ -0.04
SSSCA1-201ENST00000309328 CDC42EP3Q9UKI2 254 aa14.8□□□□□ -0.04
SSSCA1-201ENST00000309328 AUP1Q9Y679 476 aa14.8□□□□□ -0.04
SSSCA1-201ENST00000309328 LINC00312Q9Y6C7 94 aa14.8□□□□□ -0.04
SSSCA1-201ENST00000309328 TMEM272A0A1B0GTI8 110 aa14.79□□□□□ -0.04
SSSCA1-201ENST00000309328 FCN3O75636 299 aa14.79□□□□□ -0.04
SSSCA1-201ENST00000309328 RBP4P02753 201 aa14.79□□□□□ -0.04
SSSCA1-201ENST00000309328 TFF1P04155 84 aa14.79□□□□□ -0.04
SSSCA1-201ENST00000309328 RPS19P39019 145 aaKnown RBP14.79□□□□□ -0.04
SSSCA1-201ENST00000309328 RORCP51449 518 aa14.79□□□□□ -0.04
SSSCA1-201ENST00000309328 EDDM3BP56851 147 aa14.79□□□□□ -0.04
SSSCA1-201ENST00000309328 RAB12Q6IQ22 244 aa14.79□□□□□ -0.04
SSSCA1-201ENST00000309328 OR4S1Q8NGB4 309 aa14.79□□□□□ -0.04
SSSCA1-201ENST00000309328 ACOT12Q8WYK0 555 aa14.79□□□□□ -0.04
SSSCA1-201ENST00000309328 SMR3AQ99954 134 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms