RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 IL19Q9UHD0 177 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 ERRFI1Q9UJM3 462 aaPredicted RBP9.25□□□□□ -0.93
VCL-201ENST00000211998 HLA-DQB1P01920 261 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 CDKN2AP42771 156 aaKnown RBP9.25□□□□□ -0.93
VCL-201ENST00000211998 FUT6P51993 359 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 H2BFSP57053 126 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 PMCHL1Q16048 86 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 OR1N1Q8NGS0 311 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 PATE1Q8WXA2 126 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 RAB37Q96AX2 223 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 TECRQ9NZ01 308 aaKnown RBP9.25□□□□□ -0.93
VCL-201ENST00000211998 FRRS1LQ9P0K9 344 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 CEACAM5P06731 702 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 EFNB2P52799 333 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 MICBQ29980 383 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 WDFY1Q8IWB7 410 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 SDHCQ99643 169 aaPredicted RBP9.25□□□□□ -0.93
VCL-201ENST00000211998 ALKBH7Q9BT30 221 aaPredicted RBP9.25□□□□□ -0.93
VCL-201ENST00000211998 DEFB127Q9H1M4 99 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 CACFD1Q9UGQ2 172 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 KCNE5Q9UJ90 142 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 HDGFL3Q9Y3E1 203 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 TRBV5-3A0A0A0MS03 114 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 SHISA7A6NL88 538 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 CNIH1O95406 144 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 ID4P47928 161 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 OR1C1Q15619 314 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 LYZL2Q7Z4W2 148 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 OR8A1Q8NGG7 326 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 PECRQ9BY49 303 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 WIPI2Q9Y4P8 454 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 CORTO00230 105 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 HSPB1P04792 205 aaKnown RBP9.24□□□□□ -0.93
VCL-201ENST00000211998 ZGLP1P0C6A0 271 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 RTL8BQ17RB0 113 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 SPINK9Q5DT21 86 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 TMEM183AQ8IXX5 376 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 FBLIM1Q8WUP2 373 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 A0A1W2PN81 502 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 DHRS7CA6NNS2 312 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 MKRN2OSH3BPM6 223 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 LINC01387J3KSC0 135 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 GAPDHP04406 335 aaKnown RBP9.24□□□□□ -0.93
VCL-201ENST00000211998 GNB1P62873 340 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 TMEM196Q5HYL7 178 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 RNF2Q99496 336 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 RARRES2Q99969 163 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 SLC7A10Q9NS82 523 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 CARHSP1Q9Y2V2 147 aaKnown RBP9.24□□□□□ -0.93
VCL-201ENST00000211998 ATP23Q9Y6H3 246 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 ARID1AO14497 2285 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 SYNGR2O43760 224 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 RPS4Y1P22090 263 aaKnown RBP9.24□□□□□ -0.93
VCL-201ENST00000211998 ZNF770Q6IQ21 691 aaPredicted RBP9.24□□□□□ -0.93
VCL-201ENST00000211998 SCGB1D4Q6XE38 83 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 TBC1D26Q86UD7 250 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 ZDHHC23Q8IYP9 409 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 H1FOOQ8IZA3 346 aaPredicted RBP9.24□□□□□ -0.93
VCL-201ENST00000211998 OR4D11Q8NGI4 311 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 MBD1Q9UIS9 605 aaPredicted RBP9.24□□□□□ -0.93
VCL-201ENST00000211998 LMO7DNF2Z398 122 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 SOCS1O15524 211 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 NDUFS6O75380 124 aaKnown RBP9.24□□□□□ -0.93
VCL-201ENST00000211998 MDH2P40926 338 aaKnown RBP9.24□□□□□ -0.93
VCL-201ENST00000211998 TTC32Q5I0X7 151 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 TMEM215Q68D42 235 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 ALG14Q96F25 216 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 SPSB2Q99619 263 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 MMP25Q9NPA2 562 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 PIPOXQ9P0Z9 390 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 KCNMB2Q9Y691 235 aa9.24□□□□□ -0.93
VCL-201ENST00000211998 TRAV8-7A0A075B6U6 113 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 SPTY2D1-AS1A0A0U1RR47 76 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 EPPINO95925 133 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 NMUP48645 174 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 CLDN15P56746 228 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 UBALD1Q8TB05 177 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 GALMQ96C23 342 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 SIRT4Q9Y6E7 314 aaPredicted RBP9.23□□□□□ -0.93
VCL-201ENST00000211998 SLX4Q8IY92 1834 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 LAMB1P07942 1786 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 SRSF10O75494 262 aaKnown RBP9.23□□□□□ -0.93
VCL-201ENST00000211998 TNFSF15O95150 251 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 NTN1O95631 604 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 PRDX4Q13162 271 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 CD226Q15762 336 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 LHX8Q68G74 356 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 G6PCP35575 357 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.23□□□□□ -0.93
VCL-201ENST00000211998 FOXQ1Q9C009 403 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 MRPS18AQ9NVS2 196 aaKnown RBP9.23□□□□□ -0.93
VCL-201ENST00000211998 ANXA10Q9UJ72 324 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 NKX2-6A6NCS4 301 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 C2CD4DB7Z1M9 353 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 CXCL13O43927 109 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 HOXA5P20719 270 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 TRA2AQ13595 282 aaKnown RBP eCLIP9.23□□□□□ -0.93
VCL-201ENST00000211998 SLC25A34Q6PIV7 304 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 OR1L4Q8NGR5 311 aa9.23□□□□□ -0.93
VCL-201ENST00000211998 CCL4L1Q8NHW4 92 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms