RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 G3V2L1 256 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 FAAHO00519 579 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 BUB3O43684 328 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 RAMP1O60894 148 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 FKBP6O75344 327 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 CRLF1O75462 422 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 HOXB7P09629 217 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 MPC1LP0DKB6 136 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 IL1RNP18510 177 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 CHRNB4P30926 498 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 OPRL1P41146 370 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 TSFMP43897 325 aaKnown RBP4.03□□□□□ -1.76
SDCBP-213ENST00000630925 EMX1Q04741 257 aaPredicted RBP4.03□□□□□ -1.76
SDCBP-213ENST00000630925 ZNF234Q14588 700 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 CD226Q15762 336 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 SPANXN4Q5MJ08 99 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 ALKAL1Q6UXT8 129 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 Q6ZVH6 145 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 Q6ZVQ6 151 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 SUMF1Q8NBK3 374 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 OR10G4Q8NGN3 311 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 GPR119Q8TDV5 335 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 TRUB1Q8WWH5 349 aaKnown RBP4.03□□□□□ -1.76
SDCBP-213ENST00000630925 RTP4Q96DX8 246 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 DNAJA3Q96EY1 480 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 CMTM7Q96FZ5 175 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 PGLYRP3Q96LB9 341 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 PSMB7Q99436 277 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 RNF167Q9H6Y7 350 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 Q9HAA7 133 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 TAS2R5Q9NYW4 299 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.03□□□□□ -1.76
SDCBP-213ENST00000630925 CHD6Q8TD26 2715 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 NCOR1O75376 2440 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 XIRP2A4UGR9 3374 aa4.03□□□□□ -1.76
SDCBP-213ENST00000630925 MEIKINA0A087WXM9 373 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 FAM240AA0A1B0GVK7 77 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 OR5H15A6NDH6 313 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 NCBP2LA6PVI3 153 aaKnown RBP4.02□□□□□ -1.77
SDCBP-213ENST00000630925 FOXI3A8MTJ6 420 aaPredicted RBP4.02□□□□□ -1.77
SDCBP-213ENST00000630925 REG1AP05451 166 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 PFN1P07737 140 aaKnown RBP4.02□□□□□ -1.77
SDCBP-213ENST00000630925 GM2AP17900 193 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 WT1P19544 449 aaPredicted RBP4.02□□□□□ -1.77
SDCBP-213ENST00000630925 CD34P28906 385 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 DDTP30046 118 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 GPR183P32249 361 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 GLRXP35754 106 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 RIPPLY3P57055 190 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 SNRPD1P62314 119 aaKnown RBP4.02□□□□□ -1.77
SDCBP-213ENST00000630925 SRSF9Q13242 221 aaKnown RBP eCLIP4.02□□□□□ -1.77
SDCBP-213ENST00000630925 BIKQ13323 160 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 CRHR2Q13324 411 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 FASTKQ14296 549 aaKnown RBP4.02□□□□□ -1.77
SDCBP-213ENST00000630925 CLEC12BQ2HXU8 276 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 OTUD1Q5VV17 481 aaPredicted RBP4.02□□□□□ -1.77
SDCBP-213ENST00000630925 LAMTOR1Q6IAA8 161 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 TBPL2Q6SJ96 375 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 NAPRTQ6XQN6 538 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 OR5H6Q8NGV6 325 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 MCFD2Q8NI22 146 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 SFT2D1Q8WV19 159 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 MBD6Q96DN6 1003 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 PIK3IP1Q96FE7 263 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 NARS2Q96I59 477 aaKnown RBP4.02□□□□□ -1.77
SDCBP-213ENST00000630925 CAPZA3Q96KX2 299 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 EFCAB11Q9BUY7 163 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 SLC17A9Q9BYT1 436 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 VCXQ9H320 206 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 C3orf14Q9HBI5 128 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 EXOSC4Q9NPD3 245 aaKnown RBP4.02□□□□□ -1.77
SDCBP-213ENST00000630925 FNDC1Q4ZHG4 1894 aaPredicted RBP4.02□□□□□ -1.77
SDCBP-213ENST00000630925 POLR2AP24928 1970 aaKnown RBP4.02□□□□□ -1.77
SDCBP-213ENST00000630925 ZDBF2Q9HCK1 2354 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 K7ERU9 68 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 HMGB3O15347 200 aaKnown RBP4.02□□□□□ -1.77
SDCBP-213ENST00000630925 GGCTO75223 188 aaKnown RBP4.02□□□□□ -1.77
SDCBP-213ENST00000630925 TFAP2AP05549 437 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 C8GP07360 202 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 RAB5AP20339 215 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 USF1P22415 310 aaPredicted RBP4.02□□□□□ -1.77
SDCBP-213ENST00000630925 HSPE1P61604 102 aaKnown RBP4.02□□□□□ -1.77
SDCBP-213ENST00000630925 VMACQ2NL98 169 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 UNC50Q53HI1 259 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 TPTE2P1Q5T6R2 138 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 LYPD4Q6UWN0 246 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 IFNEQ86WN2 208 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 CALHM3Q86XJ0 350 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 C1orf158Q8N1D5 194 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 ZNF383Q8NA42 475 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 BEST4Q8NFU0 473 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 OR1J1Q8NGS3 322 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 OR2G2Q8NGZ5 317 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 AGAP11Q8TF27 550 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 ZNF486Q96H40 463 aaPredicted RBP4.02□□□□□ -1.77
SDCBP-213ENST00000630925 KLF6Q99612 283 aaPredicted RBP4.02□□□□□ -1.77
SDCBP-213ENST00000630925 GPR21Q99679 349 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 ADGRL4Q9HBW9 690 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 COMMD9Q9P000 198 aa4.02□□□□□ -1.77
SDCBP-213ENST00000630925 NTNG1Q9Y2I2 539 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms