RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 SPICQ8N5J4 248 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 ASCC1Q8N9N2 400 aaKnown RBP6.4□□□□□ -1.38
MSH6-211ENST00000606499 ZNRF1Q8ND25 227 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 DGCR14Q96DF8 476 aaKnown RBP6.4□□□□□ -1.38
MSH6-211ENST00000606499 MRPS24Q96EL2 167 aaKnown RBP6.4□□□□□ -1.38
MSH6-211ENST00000606499 SLIRPQ9GZT3 109 aaKnown RBP6.4□□□□□ -1.38
MSH6-211ENST00000606499 CHST6Q9GZX3 395 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 ZNF665Q9H7R5 613 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 BATF3Q9NR55 127 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 PCDHB16Q9NRJ7 776 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 CCDC59Q9P031 241 aaKnown RBP6.4□□□□□ -1.38
MSH6-211ENST00000606499 COMMD3Q9UBI1 195 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 FBLN5Q9UBX5 448 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 PCDHB10Q9UN67 800 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 ARID1AO14497 2285 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 TRAV24A0A0B4J272 114 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 TMEM82A0PJX8 343 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 F5H0A9 414 aaPredicted RBP6.39□□□□□ -1.39
MSH6-211ENST00000606499 SLC33A1O00400 549 aaPredicted RBP6.39□□□□□ -1.39
MSH6-211ENST00000606499 DVL1O14640 695 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 SH2D1BO14796 132 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 SIGLEC5O15389 551 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 SOCS1O15524 211 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 PHF1O43189 567 aaPredicted RBP6.39□□□□□ -1.39
MSH6-211ENST00000606499 PSPNO60542 156 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 ZNF737O75373 536 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 WNT2P09544 360 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 USF1P22415 310 aaPredicted RBP6.39□□□□□ -1.39
MSH6-211ENST00000606499 CPT2P23786 658 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 SOX6P35712 828 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 PITPNBP48739 271 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 VEGFCP49767 419 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 IL13RA2Q14627 380 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 MPV17LQ2QL34 196 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 MOGAT2Q3SYC2 334 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 ATAD3CQ5T2N8 411 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 ATPAF1Q5TC12 328 aaPredicted RBP6.39□□□□□ -1.39
MSH6-211ENST00000606499 SIGIRRQ6IA17 410 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 BRICD5Q6PL45 260 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 ZNF841Q6ZN19 808 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 C17orf107Q6ZR85 190 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 LINC00596Q86U02 117 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 CIARTQ8N365 385 aaPredicted RBP6.39□□□□□ -1.39
MSH6-211ENST00000606499 SAMD12Q8N8I0 201 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 TMEM185AQ8NFB2 350 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 OR8B3Q8NGG8 313 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 KCTD12Q96CX2 325 aaKnown RBP6.39□□□□□ -1.39
MSH6-211ENST00000606499 NEIL1Q96FI4 390 aaPredicted RBP6.39□□□□□ -1.39
MSH6-211ENST00000606499 SDSLQ96GA7 329 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 OR8B2Q96RD0 313 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 REG4Q9BYZ8 158 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 DNTTIP1Q9H147 329 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 PPA2Q9H2U2 334 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 PATZ1Q9HBE1 687 aaKnown RBP6.39□□□□□ -1.39
MSH6-211ENST00000606499 RHBDL2Q9NX52 303 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 ABRACLQ9P1F3 81 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 KAAG1Q9UBP8 84 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 RAB22AQ9UL26 194 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 SPATA2Q9UM82 520 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 MAB21L2Q9Y586 359 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 ETV7Q9Y603 341 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 SVEP1Q4LDE5 3571 aa6.39□□□□□ -1.39
MSH6-211ENST00000606499 FAM90A10PA6NDY2 464 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 FAM90A18PA6NE21 464 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 FAM90A16PA6NEW6 464 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 FAM90A20PA6NIJ5 464 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 FAM90A8PA6NJQ4 464 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 FAM90A7PA6NKC0 464 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 FOXI3A8MTJ6 420 aaPredicted RBP6.38□□□□□ -1.39
MSH6-211ENST00000606499 FAM90A22PA8MWA6 464 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 FAM90A12PA8MX19 464 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 FAM90A5PA8MXJ8 464 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 FAM90A23PA8MXZ1 464 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 FAM157AC9JC47 383 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 H7C1Q1 480 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 DEGS1O15121 323 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 NDUFB3O43676 98 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 NDUFA2O43678 99 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 HPGDSO60760 199 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 TMEM127O75204 238 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 TK1P04183 234 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 EIF4EP06730 217 aaKnown RBP6.38□□□□□ -1.39
MSH6-211ENST00000606499 CHRM2P08172 466 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 FAM90A15PP0C7V4 464 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 FAM90A13PP0C7W8 464 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 FAM90A14PP0C7W9 464 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 FAM90A24PP0C7X0 464 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 RAB6AP20340 208 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 CHATP28329 748 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 OR3A1P47881 315 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 SCAND1P57086 179 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 LCN2P80188 198 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 ATXN7L3Q14CW9 347 aaPredicted RBP6.38□□□□□ -1.39
MSH6-211ENST00000606499 PAN3Q58A45 887 aaKnown RBP6.38□□□□□ -1.39
MSH6-211ENST00000606499 UBE2NLQ5JXB2 153 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 NKAPLQ5M9Q1 402 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 RAB12Q6IQ22 244 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 NLRC3Q7RTR2 1065 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 SLC36A1Q7Z2H8 476 aa6.38□□□□□ -1.39
MSH6-211ENST00000606499 C6orf201Q7Z4U5 140 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms