RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 MPV17LQ2QL34 196 aa10.53□□□□□ -0.72
CHMP2A-206ENST00000600118 DUX4L9Q6RFH8 374 aaPredicted RBP10.53□□□□□ -0.72
CHMP2A-206ENST00000600118 BIVMQ86UB2 503 aa10.53□□□□□ -0.72
CHMP2A-206ENST00000600118 FAM216BQ8N7L0 139 aa10.53□□□□□ -0.72
CHMP2A-206ENST00000600118 OR5H6Q8NGV6 325 aa10.53□□□□□ -0.72
CHMP2A-206ENST00000600118 TMEM59Q9BXS4 323 aa10.53□□□□□ -0.72
CHMP2A-206ENST00000600118 SELENOIQ9C0D9 397 aa10.53□□□□□ -0.72
CHMP2A-206ENST00000600118 ZNF665Q9H7R5 613 aa10.53□□□□□ -0.72
CHMP2A-206ENST00000600118 BATF3Q9NR55 127 aa10.53□□□□□ -0.72
CHMP2A-206ENST00000600118 CCDC59Q9P031 241 aaKnown RBP10.53□□□□□ -0.72
CHMP2A-206ENST00000600118 ZNF581Q9P0T4 197 aa10.53□□□□□ -0.72
CHMP2A-206ENST00000600118 DUX4Q9UBX2 424 aa10.53□□□□□ -0.72
CHMP2A-206ENST00000600118 OR14J1Q9UGF5 321 aa10.53□□□□□ -0.72
CHMP2A-206ENST00000600118 RAB22AQ9UL26 194 aa10.53□□□□□ -0.72
CHMP2A-206ENST00000600118 SPATA2Q9UM82 520 aa10.53□□□□□ -0.72
CHMP2A-206ENST00000600118 MYO9AB2RTY4 2548 aa10.52□□□□□ -0.72
CHMP2A-206ENST00000600118 TRAV24A0A0B4J272 114 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 TMEM82A0PJX8 343 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 NKX6-3A6NJ46 265 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 FOXI3A8MTJ6 420 aaPredicted RBP10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 RNF223E7ERA6 249 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 SH2D1BO14796 132 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 DEGS1O15121 323 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 TMPRSS2O15393 492 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 CHRM2P08172 466 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 SELLP14151 372 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 RPS2P15880 293 aaKnown RBP10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 IL2RGP31785 369 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 GABRA2P47869 451 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 IL13RA1P78552 427 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 COL10A1Q03692 680 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 PDCD1Q15116 288 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 TAF9Q16594 264 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 SIGIRRQ6IA17 410 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 SPNS3Q6ZMD2 512 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 C17orf107Q6ZR85 190 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 SLC36A1Q7Z2H8 476 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 ZNF561Q8N587 486 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 CHST4Q8NCG5 386 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 ACOT12Q8WYK0 555 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 SLC25A38Q96DW6 304 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 NEIL1Q96FI4 390 aaPredicted RBP10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 C1orf159Q96HA4 380 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 MED30Q96HR3 178 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 URM1Q9BTM9 101 aaKnown RBP10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 SLIRPQ9GZT3 109 aaKnown RBP10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 RCC2Q9P258 522 aaKnown RBP10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 GLS2Q9UI32 602 aa10.52□□□□□ -0.73
CHMP2A-206ENST00000600118 OTOGQ6ZRI0 2925 aa10.51□□□□□ -0.73
CHMP2A-206ENST00000600118 K7N7A8 449 aa10.51□□□□□ -0.73
CHMP2A-206ENST00000600118 SLC33A1O00400 549 aaPredicted RBP10.51□□□□□ -0.73
CHMP2A-206ENST00000600118 PSPNO60542 156 aa10.51□□□□□ -0.73
CHMP2A-206ENST00000600118 ZNF44P15621 663 aa10.51□□□□□ -0.73
CHMP2A-206ENST00000600118 PITPNBP48739 271 aa10.51□□□□□ -0.73
CHMP2A-206ENST00000600118 SEC61A1P61619 476 aaKnown RBP10.51□□□□□ -0.73
CHMP2A-206ENST00000600118 IKZF1Q13422 519 aa10.51□□□□□ -0.73
CHMP2A-206ENST00000600118 METAP1DQ6UB28 335 aaPredicted RBP10.51□□□□□ -0.73
CHMP2A-206ENST00000600118 NLRC3Q7RTR2 1065 aa10.51□□□□□ -0.73
CHMP2A-206ENST00000600118 ZNRF1Q8ND25 227 aa10.51□□□□□ -0.73
CHMP2A-206ENST00000600118 OR8B3Q8NGG8 313 aa10.51□□□□□ -0.73
CHMP2A-206ENST00000600118 AP3S1Q92572 193 aa10.51□□□□□ -0.73
CHMP2A-206ENST00000600118 RAB39BQ96DA2 213 aa10.51□□□□□ -0.73
CHMP2A-206ENST00000600118 SNX22Q96L94 193 aa10.51□□□□□ -0.73
CHMP2A-206ENST00000600118 OR8B2Q96RD0 313 aa10.51□□□□□ -0.73
CHMP2A-206ENST00000600118 NICN1Q9BSH3 213 aa10.51□□□□□ -0.73
CHMP2A-206ENST00000600118 SHARPINQ9H0F6 387 aa10.51□□□□□ -0.73
CHMP2A-206ENST00000600118 FAM234AQ9H0X4 552 aa10.51□□□□□ -0.73
CHMP2A-206ENST00000600118 RHBDL2Q9NX52 303 aa10.51□□□□□ -0.73
CHMP2A-206ENST00000600118 PCDHB10Q9UN67 800 aa10.51□□□□□ -0.73
CHMP2A-206ENST00000600118 A0A075B6Q4 140 aa10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 KIAA1324LA8MWY0 1029 aaPredicted RBP10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 A8MXK9 166 aa10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 H7C1Q1 480 aa10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 RAB27BO00194 218 aa10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 SIRPB1O00241 398 aa10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 DVL1O14640 695 aa10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 NDUFB3O43676 98 aa10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 PDCD6O75340 191 aa10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 OR7C1O76099 320 aaPredicted RBP10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 TK1P04183 234 aa10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 GABRR1P24046 479 aa10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 CHATP28329 748 aa10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 SOX6P35712 828 aa10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 OR3A1P47881 315 aa10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 FAM189A2Q15884 450 aa10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 WDR25Q64LD2 544 aaPredicted RBP10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 CIARTQ8N365 385 aaPredicted RBP10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 FGFRL1Q8N441 504 aa10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 OR4S1Q8NGB4 309 aa10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 DCUN1D5Q9BTE7 237 aa10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 NXF2Q9GZY0 626 aaKnown RBP10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 ABCG5Q9H222 651 aa10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 SPACA1Q9HBV2 294 aa10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 CREBBPQ92793 2442 aa10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 TEX15Q9BXT5 2789 aa10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 ITPR3Q14573 2671 aa10.5□□□□□ -0.73
CHMP2A-206ENST00000600118 VPS13CQ709C8 3753 aa10.49□□□□□ -0.73
CHMP2A-206ENST00000600118 FAM157AC9JC47 383 aa10.49□□□□□ -0.73
CHMP2A-206ENST00000600118 H3BUI4 141 aa10.49□□□□□ -0.73
CHMP2A-206ENST00000600118 GPR37O15354 613 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms