RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 COMMD4Q9H0A8 199 aa12.21□□□□□ -0.45
LIG1-215ENST00000597901 RHOFQ9HBH0 211 aa12.21□□□□□ -0.45
LIG1-215ENST00000597901 TCF7L1Q9HCS4 588 aa12.21□□□□□ -0.45
LIG1-215ENST00000597901 LINC00312Q9Y6C7 94 aa12.21□□□□□ -0.45
LIG1-215ENST00000597901 ODF3BA8MYP8 253 aa12.2□□□□□ -0.46
LIG1-215ENST00000597901 TIMM23O14925 209 aa12.2□□□□□ -0.46
LIG1-215ENST00000597901 OR2H2O95918 312 aa12.2□□□□□ -0.46
LIG1-215ENST00000597901 OR3A1P47881 315 aa12.2□□□□□ -0.46
LIG1-215ENST00000597901 SCN1BQ07699 218 aa12.2□□□□□ -0.46
LIG1-215ENST00000597901 KISS1Q15726 138 aa12.2□□□□□ -0.46
LIG1-215ENST00000597901 LRRC36Q1X8D7 754 aa12.2□□□□□ -0.46
LIG1-215ENST00000597901 LDLRAD2Q5SZI1 272 aa12.2□□□□□ -0.46
LIG1-215ENST00000597901 ZNF626Q68DY1 528 aa12.2□□□□□ -0.46
LIG1-215ENST00000597901 HAVCR2Q8TDQ0 301 aa12.2□□□□□ -0.46
LIG1-215ENST00000597901 JAM3Q9BX67 310 aa12.2□□□□□ -0.46
LIG1-215ENST00000597901 EXOSC4Q9NPD3 245 aaKnown RBP12.2□□□□□ -0.46
LIG1-215ENST00000597901 DHDHQ9UQ10 334 aa12.2□□□□□ -0.46
LIG1-215ENST00000597901 SIGLEC9Q9Y336 463 aa12.2□□□□□ -0.46
LIG1-215ENST00000597901 TBL2Q9Y4P3 447 aaKnown RBP12.2□□□□□ -0.46
LIG1-215ENST00000597901 A0A0G2JK05 382 aa12.19□□□□□ -0.46
LIG1-215ENST00000597901 VGLL3A8MV65 326 aa12.19□□□□□ -0.46
LIG1-215ENST00000597901 M0QZ24 198 aa12.19□□□□□ -0.46
LIG1-215ENST00000597901 DEGS1O15121 323 aa12.19□□□□□ -0.46
LIG1-215ENST00000597901 SULT1B1O43704 296 aa12.19□□□□□ -0.46
LIG1-215ENST00000597901 CLIC3O95833 236 aa12.19□□□□□ -0.46
LIG1-215ENST00000597901 HCKP08631 526 aa12.19□□□□□ -0.46
LIG1-215ENST00000597901 DCKP27707 260 aa12.19□□□□□ -0.46
LIG1-215ENST00000597901 GABRA5P31644 462 aa12.19□□□□□ -0.46
LIG1-215ENST00000597901 ETV1P50549 477 aa12.19□□□□□ -0.46
LIG1-215ENST00000597901 P2RX3P56373 397 aa12.19□□□□□ -0.46
LIG1-215ENST00000597901 ZP1P60852 638 aa12.19□□□□□ -0.46
LIG1-215ENST00000597901 DYNC1I2Q13409 638 aaKnown RBP12.19□□□□□ -0.46
LIG1-215ENST00000597901 SSX2Q16385 188 aa12.19□□□□□ -0.46
LIG1-215ENST00000597901 ZSCAN26Q16670 478 aa12.19□□□□□ -0.46
LIG1-215ENST00000597901 ZNF691Q5VV52 312 aa12.19□□□□□ -0.46
LIG1-215ENST00000597901 Q6P435 159 aa12.19□□□□□ -0.46
LIG1-215ENST00000597901 RPL22L1Q6P5R6 122 aaKnown RBP12.19□□□□□ -0.46
LIG1-215ENST00000597901 CORO2AQ92828 525 aa12.19□□□□□ -0.46
LIG1-215ENST00000597901 RAB18Q9NP72 206 aa12.19□□□□□ -0.46
LIG1-215ENST00000597901 UBE2J1Q9Y385 318 aaPredicted RBP12.19□□□□□ -0.46
LIG1-215ENST00000597901 PCDHGB5Q9Y5G0 923 aa12.19□□□□□ -0.46
LIG1-215ENST00000597901 SESN1Q9Y6P5 492 aa12.19□□□□□ -0.46
LIG1-215ENST00000597901 MGAM2Q2M2H8 2515 aa12.19□□□□□ -0.46
LIG1-215ENST00000597901 MEGF11A6BM72 1044 aa12.18□□□□□ -0.46
LIG1-215ENST00000597901 KCNAB3O43448 404 aa12.18□□□□□ -0.46
LIG1-215ENST00000597901 MMP23AO75900 390 aa12.18□□□□□ -0.46
LIG1-215ENST00000597901 RAB3AP20336 220 aa12.18□□□□□ -0.46
LIG1-215ENST00000597901 GLIPR1P48060 266 aa12.18□□□□□ -0.46
LIG1-215ENST00000597901 SOX2P48431 317 aa12.18□□□□□ -0.46
LIG1-215ENST00000597901 AESQ08117 197 aa12.18□□□□□ -0.46
LIG1-215ENST00000597901 IL18R1Q13478 541 aa12.18□□□□□ -0.46
LIG1-215ENST00000597901 FAM189A2Q15884 450 aa12.18□□□□□ -0.46
LIG1-215ENST00000597901 CCDC58Q4VC31 144 aa12.18□□□□□ -0.46
LIG1-215ENST00000597901 PLA1AQ53H76 456 aa12.18□□□□□ -0.46
LIG1-215ENST00000597901 TTC23Q5W5X9 447 aa12.18□□□□□ -0.46
LIG1-215ENST00000597901 XAF1Q6GPH4 301 aa12.18□□□□□ -0.46
LIG1-215ENST00000597901 ZNF529Q6P280 563 aa12.18□□□□□ -0.46
LIG1-215ENST00000597901 CCBE1Q6UXH8 406 aaPredicted RBP12.18□□□□□ -0.46
LIG1-215ENST00000597901 TMPRSS11AQ6ZMR5 421 aa12.18□□□□□ -0.46
LIG1-215ENST00000597901 CNIH3Q8TBE1 160 aa12.18□□□□□ -0.46
LIG1-215ENST00000597901 TSEN15Q8WW01 171 aaKnown RBP12.18□□□□□ -0.46
LIG1-215ENST00000597901 TMEM133Q9H2Q1 129 aa12.18□□□□□ -0.46
LIG1-215ENST00000597901 BABAM2Q9NXR7 383 aa12.18□□□□□ -0.46
LIG1-215ENST00000597901 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.18□□□□□ -0.46
LIG1-215ENST00000597901 SIRT4Q9Y6E7 314 aaPredicted RBP12.18□□□□□ -0.46
LIG1-215ENST00000597901 TRRAPQ9Y4A5 3859 aa12.18□□□□□ -0.46
LIG1-215ENST00000597901 IRGMA1A4Y4 181 aa12.17□□□□□ -0.46
LIG1-215ENST00000597901 FUOMA2VDF0 154 aa12.17□□□□□ -0.46
LIG1-215ENST00000597901 OGG1O15527 345 aa12.17□□□□□ -0.46
LIG1-215ENST00000597901 CHST1O43916 411 aa12.17□□□□□ -0.46
LIG1-215ENST00000597901 ZNF44P15621 663 aa12.17□□□□□ -0.46
LIG1-215ENST00000597901 ADARB1P78563 741 aaKnown RBP12.17□□□□□ -0.46
LIG1-215ENST00000597901 DEFA6Q01524 100 aa12.17□□□□□ -0.46
LIG1-215ENST00000597901 CDK5R1Q15078 307 aa12.17□□□□□ -0.46
LIG1-215ENST00000597901 MINOS1Q5TGZ0 78 aa12.17□□□□□ -0.46
LIG1-215ENST00000597901 OR2G6Q5TZ20 316 aa12.17□□□□□ -0.46
LIG1-215ENST00000597901 ELP2Q6IA86 826 aa12.17□□□□□ -0.46
LIG1-215ENST00000597901 LIAT1Q6ZQX7 453 aa12.17□□□□□ -0.46
LIG1-215ENST00000597901 TRAPPC6BQ86SZ2 158 aa12.17□□□□□ -0.46
LIG1-215ENST00000597901 SATL1Q86VE3 508 aa12.17□□□□□ -0.46
LIG1-215ENST00000597901 PXT1Q8NFP0 134 aa12.17□□□□□ -0.46
LIG1-215ENST00000597901 OR4C13Q8NGP0 309 aa12.17□□□□□ -0.46
LIG1-215ENST00000597901 GPR148Q8TDV2 347 aa12.17□□□□□ -0.46
LIG1-215ENST00000597901 CYGBQ8WWM9 190 aa12.17□□□□□ -0.46
LIG1-215ENST00000597901 RGP1Q92546 391 aaPredicted RBP12.17□□□□□ -0.46
LIG1-215ENST00000597901 FOXRED1Q96CU9 486 aaPredicted RBP12.17□□□□□ -0.46
LIG1-215ENST00000597901 CDCA4Q9BXL8 241 aa12.17□□□□□ -0.46
LIG1-215ENST00000597901 ABCB10Q9NRK6 738 aa12.17□□□□□ -0.46
LIG1-215ENST00000597901 CLEC2DQ9UHP7 191 aa12.17□□□□□ -0.46
LIG1-215ENST00000597901 MINOS1-NBL1R4GNA1 71 aa12.17□□□□□ -0.46
LIG1-215ENST00000597901 TRGV10A0A0A0MS01 117 aa12.16□□□□□ -0.46
LIG1-215ENST00000597901 IGHV2-26A0A0B4J1V2 119 aa12.16□□□□□ -0.46
LIG1-215ENST00000597901 A6NDX4 124 aa12.16□□□□□ -0.46
LIG1-215ENST00000597901 SLC33A1O00400 549 aaPredicted RBP12.16□□□□□ -0.46
LIG1-215ENST00000597901 MAGEB3O15480 346 aa12.16□□□□□ -0.46
LIG1-215ENST00000597901 MTNR1BP49286 362 aa12.16□□□□□ -0.46
LIG1-215ENST00000597901 EFNB2P52799 333 aa12.16□□□□□ -0.46
LIG1-215ENST00000597901 OR52W1Q6IF63 320 aa12.16□□□□□ -0.46
LIG1-215ENST00000597901 ASCL4Q6XD76 172 aa12.16□□□□□ -0.46
LIG1-215ENST00000597901 ABHD12Q8N2K0 398 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms