RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 PRSS50Q9UI38 385 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 RAB19A4D1S5 217 aa16.47■□□□□ 0.23
PRKCSH-209ENST00000589838 TEX46H3BTG2 121 aa16.47■□□□□ 0.23
PRKCSH-209ENST00000589838 SPEM2Q0P670 501 aa16.47■□□□□ 0.23
PRKCSH-209ENST00000589838 PDCD1Q15116 288 aa16.47■□□□□ 0.23
PRKCSH-209ENST00000589838 FAM185AQ8N0U4 392 aa16.47■□□□□ 0.23
PRKCSH-209ENST00000589838 MARC2Q969Z3 335 aa16.47■□□□□ 0.23
PRKCSH-209ENST00000589838 RSRP1Q9BUV0 290 aa16.47■□□□□ 0.23
PRKCSH-209ENST00000589838 C12orf49Q9H741 205 aa16.47■□□□□ 0.23
PRKCSH-209ENST00000589838 FBXO9Q9UK97 447 aaPredicted RBP16.47■□□□□ 0.23
PRKCSH-209ENST00000589838 FRYLO94915 3013 aa16.47■□□□□ 0.23
PRKCSH-209ENST00000589838 DNAJC13O75165 2243 aa16.46■□□□□ 0.23
PRKCSH-209ENST00000589838 ZNF407Q9C0G0 2248 aa16.46■□□□□ 0.23
PRKCSH-209ENST00000589838 MSGN1A6NI15 193 aa16.46■□□□□ 0.23
PRKCSH-209ENST00000589838 OR5B21A6NL26 309 aa16.46■□□□□ 0.23
PRKCSH-209ENST00000589838 NGFP01138 241 aa16.46■□□□□ 0.23
PRKCSH-209ENST00000589838 TGIF1Q15583 401 aa16.46■□□□□ 0.23
PRKCSH-209ENST00000589838 ZNF573Q86YE8 665 aa16.46■□□□□ 0.23
PRKCSH-209ENST00000589838 LGI3Q8N145 548 aa16.46■□□□□ 0.23
PRKCSH-209ENST00000589838 MRPL24Q96A35 216 aaKnown RBP16.46■□□□□ 0.23
PRKCSH-209ENST00000589838 SLC5A7Q9GZV3 580 aa16.46■□□□□ 0.23
PRKCSH-209ENST00000589838 ZDHHC11Q9H8X9 412 aa16.46■□□□□ 0.23
PRKCSH-209ENST00000589838 SPACA1Q9HBV2 294 aa16.46■□□□□ 0.23
PRKCSH-209ENST00000589838 SLC2A9Q9NRM0 540 aa16.46■□□□□ 0.23
PRKCSH-209ENST00000589838 TMEM100Q9NV29 134 aa16.46■□□□□ 0.23
PRKCSH-209ENST00000589838 DIRAS3O95661 229 aa16.46■□□□□ 0.22
PRKCSH-209ENST00000589838 HOXD4P09016 255 aaPredicted RBP16.46■□□□□ 0.22
PRKCSH-209ENST00000589838 OR5AC1P0C628 307 aa16.46■□□□□ 0.22
PRKCSH-209ENST00000589838 LIAT1Q6ZQX7 453 aa16.46■□□□□ 0.22
PRKCSH-209ENST00000589838 OR5P3Q8WZ94 311 aa16.46■□□□□ 0.22
PRKCSH-209ENST00000589838 RIMS4Q9H426 269 aaPredicted RBP16.46■□□□□ 0.22
PRKCSH-209ENST00000589838 PLEKHA2Q9HB19 425 aa16.46■□□□□ 0.22
PRKCSH-209ENST00000589838 GLRX2Q9NS18 164 aa16.46■□□□□ 0.22
PRKCSH-209ENST00000589838 J3QW42 95 aa16.45■□□□□ 0.22
PRKCSH-209ENST00000589838 DEDDO75618 318 aa16.45■□□□□ 0.22
PRKCSH-209ENST00000589838 ATP1A1-AS1Q5TC04 95 aa16.45■□□□□ 0.22
PRKCSH-209ENST00000589838 P4HA3Q7Z4N8 544 aa16.45■□□□□ 0.22
PRKCSH-209ENST00000589838 PIP4P1Q86T03 277 aa16.45■□□□□ 0.22
PRKCSH-209ENST00000589838 BHLHE23Q8NDY6 225 aa16.45■□□□□ 0.22
PRKCSH-209ENST00000589838 GMPPAQ96IJ6 420 aaPredicted RBP16.45■□□□□ 0.22
PRKCSH-209ENST00000589838 FGF23Q9GZV9 251 aaPredicted RBP16.45■□□□□ 0.22
PRKCSH-209ENST00000589838 RCC2Q9P258 522 aaKnown RBP16.45■□□□□ 0.22
PRKCSH-209ENST00000589838 SPRR3Q9UBC9 169 aa16.45■□□□□ 0.22
PRKCSH-209ENST00000589838 COL6A3P12111 3177 aa16.45■□□□□ 0.22
PRKCSH-209ENST00000589838 CFAP54Q96N23 3096 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 KIR2DS1A0A191URI9 304 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 PCNX2A6NKB5 2137 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 K7EPK0 472 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 IL18BPO95998 194 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 CTXN2P0C2S0 81 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 HKR1P10072 659 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 AADACP22760 399 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 RPL12P30050 165 aaKnown RBP16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 KIR2DS4P43632 304 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 GNG3P63215 75 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 SRPXP78539 464 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 KIR2DS1Q14954 304 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 DAZAP2Q15038 168 aaPredicted RBP16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 HIKESHIQ53FT3 197 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 PHLDA2Q53GA4 152 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 FOXRED2Q8IWF2 684 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 FAM71E2Q8N5Q1 922 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 OR5T2Q8NGG2 359 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 GTF3AQ92664 365 aaKnown RBP16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 PRRX2Q99811 253 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 Q9N2K0 584 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 MTCH1Q9NZJ7 389 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 WDFY3Q8IZQ1 3526 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 H7C1Q1 480 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 NAPSAO96009 420 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 PPYP01298 95 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 TK1P04183 234 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 MRPL49Q13405 166 aaKnown RBP16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 TBC1D28Q2M2D7 210 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 C18orf12Q96KH6 178 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 ZNF552Q9H707 407 aaPredicted RBP16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 RHOFQ9HBH0 211 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 ASF1BQ9NVP2 202 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 PCDHB10Q9UN67 800 aa16.44■□□□□ 0.22
PRKCSH-209ENST00000589838 GPR179Q6PRD1 2367 aa16.43■□□□□ 0.22
PRKCSH-209ENST00000589838 GALR2O43603 387 aaPredicted RBP16.43■□□□□ 0.22
PRKCSH-209ENST00000589838 GLAP06280 429 aa16.43■□□□□ 0.22
PRKCSH-209ENST00000589838 WNT5AP41221 380 aa16.43■□□□□ 0.22
PRKCSH-209ENST00000589838 TNFSF10P50591 281 aa16.43■□□□□ 0.22
PRKCSH-209ENST00000589838 TGFBR3Q03167 851 aa16.43■□□□□ 0.22
PRKCSH-209ENST00000589838 SPERTQ8NA61 448 aa16.43■□□□□ 0.22
PRKCSH-209ENST00000589838 OR1S2Q8NGQ3 325 aa16.43■□□□□ 0.22
PRKCSH-209ENST00000589838 TMED6Q8WW62 240 aa16.43■□□□□ 0.22
PRKCSH-209ENST00000589838 ARL11Q969Q4 196 aa16.43■□□□□ 0.22
PRKCSH-209ENST00000589838 PKIBQ9C010 78 aa16.43■□□□□ 0.22
PRKCSH-209ENST00000589838 CRIM1Q9NZV1 1036 aa16.43■□□□□ 0.22
PRKCSH-209ENST00000589838 E5RGE8 158 aa16.42■□□□□ 0.22
PRKCSH-209ENST00000589838 LRP3O75074 770 aa16.42■□□□□ 0.22
PRKCSH-209ENST00000589838 DUSP1P28562 367 aa16.42■□□□□ 0.22
PRKCSH-209ENST00000589838 IL13RA2Q14627 380 aa16.42■□□□□ 0.22
PRKCSH-209ENST00000589838 SP6Q3SY56 376 aa16.42■□□□□ 0.22
PRKCSH-209ENST00000589838 RNFT1Q5M7Z0 435 aa16.42■□□□□ 0.22
PRKCSH-209ENST00000589838 MDP1Q86V88 176 aa16.42■□□□□ 0.22
PRKCSH-209ENST00000589838 BATF2Q8N1L9 274 aa16.42■□□□□ 0.22
PRKCSH-209ENST00000589838 NEK7Q8TDX7 302 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms