RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 BMXP51813 675 aa11.65□□□□□ -0.54
MBD1-220ENST00000589758 EFNB2P52799 333 aa11.65□□□□□ -0.54
MBD1-220ENST00000589758 DLX6P56179 175 aa11.65□□□□□ -0.54
MBD1-220ENST00000589758 EDDM3BP56851 147 aa11.65□□□□□ -0.54
MBD1-220ENST00000589758 MEF2CQ06413 473 aaPredicted RBP11.65□□□□□ -0.54
MBD1-220ENST00000589758 HERPUD1Q15011 391 aa11.65□□□□□ -0.54
MBD1-220ENST00000589758 CRIP3Q6Q6R5 217 aa11.65□□□□□ -0.54
MBD1-220ENST00000589758 EGFL6Q8IUX8 553 aa11.65□□□□□ -0.54
MBD1-220ENST00000589758 OR8H2Q8N162 312 aa11.65□□□□□ -0.54
MBD1-220ENST00000589758 ZFP41Q8N8Y5 198 aa11.65□□□□□ -0.54
MBD1-220ENST00000589758 DNAAF1Q8NEP3 725 aa11.65□□□□□ -0.54
MBD1-220ENST00000589758 FOXRED1Q96CU9 486 aaPredicted RBP11.65□□□□□ -0.54
MBD1-220ENST00000589758 ADAT3Q96EY9 351 aaPredicted RBP11.65□□□□□ -0.54
MBD1-220ENST00000589758 CDCA4Q9BXL8 241 aa11.65□□□□□ -0.54
MBD1-220ENST00000589758 ANKRD60Q9BZ19 345 aa11.65□□□□□ -0.54
MBD1-220ENST00000589758 IGKV1-27A0A075B6S5 117 aa11.64□□□□□ -0.55
MBD1-220ENST00000589758 TMEM212A6NML5 194 aa11.64□□□□□ -0.55
MBD1-220ENST00000589758 VGLL3A8MV65 326 aa11.64□□□□□ -0.55
MBD1-220ENST00000589758 MYL12BO14950 172 aa11.64□□□□□ -0.55
MBD1-220ENST00000589758 ZFPL1O95159 310 aa11.64□□□□□ -0.55
MBD1-220ENST00000589758 TSPAN15O95858 294 aa11.64□□□□□ -0.55
MBD1-220ENST00000589758 CYB5AP00167 134 aa11.64□□□□□ -0.55
MBD1-220ENST00000589758 LALBAP00709 142 aa11.64□□□□□ -0.55
MBD1-220ENST00000589758 ATP1B3P54709 279 aa11.64□□□□□ -0.55
MBD1-220ENST00000589758 RPL22L1Q6P5R6 122 aaKnown RBP11.64□□□□□ -0.55
MBD1-220ENST00000589758 ZNF782Q6ZMW2 699 aaPredicted RBP11.64□□□□□ -0.55
MBD1-220ENST00000589758 SLC25A26Q70HW3 274 aa11.64□□□□□ -0.55
MBD1-220ENST00000589758 OR52N1Q8NH53 320 aa11.64□□□□□ -0.55
MBD1-220ENST00000589758 PPP1R35Q8TAP8 253 aa11.64□□□□□ -0.55
MBD1-220ENST00000589758 TSEN15Q8WW01 171 aaKnown RBP11.64□□□□□ -0.55
MBD1-220ENST00000589758 SGCDQ92629 289 aa11.64□□□□□ -0.55
MBD1-220ENST00000589758 SLAMF9Q96A28 289 aa11.64□□□□□ -0.55
MBD1-220ENST00000589758 MALSU1Q96EH3 234 aa11.64□□□□□ -0.55
MBD1-220ENST00000589758 NPFFR1Q9GZQ6 430 aa11.64□□□□□ -0.55
MBD1-220ENST00000589758 FKBP14Q9NWM8 211 aa11.64□□□□□ -0.55
MBD1-220ENST00000589758 BABAM2Q9NXR7 383 aa11.64□□□□□ -0.55
MBD1-220ENST00000589758 PCDHGB5Q9Y5G0 923 aa11.64□□□□□ -0.55
MBD1-220ENST00000589758 SIRT4Q9Y6E7 314 aaPredicted RBP11.64□□□□□ -0.55
MBD1-220ENST00000589758 MEGF8Q7Z7M0 2845 aa11.64□□□□□ -0.55
MBD1-220ENST00000589758 PNMA8CA0A1B0GUJ8 204 aa11.63□□□□□ -0.55
MBD1-220ENST00000589758 hADV38S2A0JD32 116 aa11.63□□□□□ -0.55
MBD1-220ENST00000589758 F8VVB4 439 aa11.63□□□□□ -0.55
MBD1-220ENST00000589758 F8VWA3 439 aa11.63□□□□□ -0.55
MBD1-220ENST00000589758 ARG1P05089 322 aa11.63□□□□□ -0.55
MBD1-220ENST00000589758 CDK1P06493 297 aa11.63□□□□□ -0.55
MBD1-220ENST00000589758 IGHV1-8P0DP01 117 aa11.63□□□□□ -0.55
MBD1-220ENST00000589758 SOX2P48431 317 aa11.63□□□□□ -0.55
MBD1-220ENST00000589758 CDK5R1Q15078 307 aa11.63□□□□□ -0.55
MBD1-220ENST00000589758 UTS2BQ765I0 119 aa11.63□□□□□ -0.55
MBD1-220ENST00000589758 OR11H6Q8NGC7 330 aa11.63□□□□□ -0.55
MBD1-220ENST00000589758 PIFOQ8TCI5 191 aa11.63□□□□□ -0.55
MBD1-220ENST00000589758 HAVCR2Q8TDQ0 301 aa11.63□□□□□ -0.55
MBD1-220ENST00000589758 EMG1Q92979 244 aaKnown RBP11.63□□□□□ -0.55
MBD1-220ENST00000589758 MYDGFQ969H8 173 aa11.63□□□□□ -0.55
MBD1-220ENST00000589758 ZNF714Q96N38 554 aa11.63□□□□□ -0.55
MBD1-220ENST00000589758 ABCB10Q9NRK6 738 aa11.63□□□□□ -0.55
MBD1-220ENST00000589758 PAK1IP1Q9NWT1 392 aaPredicted RBP11.63□□□□□ -0.55
MBD1-220ENST00000589758 GLS2Q9UI32 602 aa11.63□□□□□ -0.55
MBD1-220ENST00000589758 PITPNC1Q9UKF7 332 aa11.63□□□□□ -0.55
MBD1-220ENST00000589758 RAB26Q9ULW5 256 aa11.63□□□□□ -0.55
MBD1-220ENST00000589758 DHDHQ9UQ10 334 aa11.63□□□□□ -0.55
MBD1-220ENST00000589758 TPRKBQ9Y3C4 175 aa11.63□□□□□ -0.55
MBD1-220ENST00000589758 TET2Q6N021 2002 aaPredicted RBP11.62□□□□□ -0.55
MBD1-220ENST00000589758 TMEM82A0PJX8 343 aa11.62□□□□□ -0.55
MBD1-220ENST00000589758 ODF3BA8MYP8 253 aa11.62□□□□□ -0.55
MBD1-220ENST00000589758 INMTO95050 263 aa11.62□□□□□ -0.55
MBD1-220ENST00000589758 HAND1O96004 215 aa11.62□□□□□ -0.55
MBD1-220ENST00000589758 OCM2P0CE71 109 aa11.62□□□□□ -0.55
MBD1-220ENST00000589758 OCMP0CE72 109 aaPredicted RBP11.62□□□□□ -0.55
MBD1-220ENST00000589758 ATF1P18846 271 aa11.62□□□□□ -0.55
MBD1-220ENST00000589758 PRKACBP22694 351 aa11.62□□□□□ -0.55
MBD1-220ENST00000589758 PAX6P26367 422 aa11.62□□□□□ -0.55
MBD1-220ENST00000589758 MTCP1P56278 107 aa11.62□□□□□ -0.55
MBD1-220ENST00000589758 FAM189A2Q15884 450 aa11.62□□□□□ -0.55
MBD1-220ENST00000589758 CCDC58Q4VC31 144 aa11.62□□□□□ -0.55
MBD1-220ENST00000589758 ZNF626Q68DY1 528 aa11.62□□□□□ -0.55
MBD1-220ENST00000589758 LHFPL2Q6ZUX7 228 aa11.62□□□□□ -0.55
MBD1-220ENST00000589758 LHFPL4Q7Z7J7 247 aa11.62□□□□□ -0.55
MBD1-220ENST00000589758 FAM110DQ8TAY7 271 aaPredicted RBP11.62□□□□□ -0.55
MBD1-220ENST00000589758 RPS4Y2Q8TD47 263 aa11.62□□□□□ -0.55
MBD1-220ENST00000589758 SPSB1Q96BD6 273 aa11.62□□□□□ -0.55
MBD1-220ENST00000589758 ZNF184Q99676 751 aaPredicted RBP11.62□□□□□ -0.55
MBD1-220ENST00000589758 ERGIC3Q9Y282 383 aa11.62□□□□□ -0.55
MBD1-220ENST00000589758 SIGLEC9Q9Y336 463 aa11.62□□□□□ -0.55
MBD1-220ENST00000589758 LINC00312Q9Y6C7 94 aa11.62□□□□□ -0.55
MBD1-220ENST00000589758 OGG1O15527 345 aa11.61□□□□□ -0.55
MBD1-220ENST00000589758 CHST1O43916 411 aa11.61□□□□□ -0.55
MBD1-220ENST00000589758 RPSAP08865 295 aaKnown RBP11.61□□□□□ -0.55
MBD1-220ENST00000589758 AZGP1P25311 298 aaKnown RBP11.61□□□□□ -0.55
MBD1-220ENST00000589758 WNT4P56705 351 aa11.61□□□□□ -0.55
MBD1-220ENST00000589758 EDDM3AQ14507 147 aa11.61□□□□□ -0.55
MBD1-220ENST00000589758 GRK1Q15835 563 aa11.61□□□□□ -0.55
MBD1-220ENST00000589758 SSX2Q16385 188 aa11.61□□□□□ -0.55
MBD1-220ENST00000589758 SPIN3Q5JUX0 258 aa11.61□□□□□ -0.55
MBD1-220ENST00000589758 FAM58AQ8N1B3 248 aa11.61□□□□□ -0.55
MBD1-220ENST00000589758 KLHDC1Q8N7A1 406 aa11.61□□□□□ -0.55
MBD1-220ENST00000589758 NANOGP1Q8N7R0 232 aa11.61□□□□□ -0.55
MBD1-220ENST00000589758 OR13C5Q8NGS8 318 aa11.61□□□□□ -0.55
MBD1-220ENST00000589758 OR13C9Q8NGT0 318 aa11.61□□□□□ -0.55
MBD1-220ENST00000589758 CFHR4Q92496 578 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms