RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 PSMD12O00232 456 aaPredicted RBP1.69□□□□□ -2.14
COPS3-217ENST00000583160 ACOX3O15254 700 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 EIF3HO15372 352 aaKnown RBP eCLIP1.69□□□□□ -2.14
COPS3-217ENST00000583160 ERI3O43414 337 aaKnown RBP1.69□□□□□ -2.14
COPS3-217ENST00000583160 STK16O75716 305 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 ATP5LO75964 103 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 MYO1DO94832 1006 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 CDRT1O95170 752 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 GPR75O95800 540 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 CCL3P10147 92 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 ZNF708P17019 499 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 DRD5P21918 477 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 HIST1H1TP22492 207 aaPredicted RBP1.69□□□□□ -2.14
COPS3-217ENST00000583160 CRYGSP22914 178 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 MAGEA12P43365 314 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 KIR3DL2P43630 455 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 TMED10P49755 219 aaKnown RBP1.69□□□□□ -2.14
COPS3-217ENST00000583160 CDK9P50750 372 aaKnown RBP1.69□□□□□ -2.14
COPS3-217ENST00000583160 ATP6V0D1P61421 351 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 ERVK-25P63136 954 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 BASP1P80723 227 aaKnown RBP1.69□□□□□ -2.14
COPS3-217ENST00000583160 TGM3Q08188 693 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 SCGB2A2Q13296 93 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 EBPQ15125 230 aaKnown RBP1.69□□□□□ -2.14
COPS3-217ENST00000583160 SPIN3Q5JUX0 258 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 C1orf185Q5T7R7 199 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 TRIM40Q6P9F5 258 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 MBOAT1Q6ZNC8 495 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 SSX8Q7RTT4 187 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 ZNF573Q86YE8 665 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 LRRC8AQ8IWT6 810 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 LGI3Q8N145 548 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 PDIK1LQ8N165 341 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 STPG2Q8N412 459 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 OR7G1Q8NGA0 311 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 ZNF675Q8TD23 568 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 OSTF1Q92882 214 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 HGDQ93099 445 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 UBE2E3Q969T4 207 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 MAGOHBQ96A72 148 aaKnown RBP1.69□□□□□ -2.14
COPS3-217ENST00000583160 L3HYPDHQ96EM0 354 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 DTNBP1Q96EV8 351 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 ZNF681Q96N22 645 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 GPR22Q99680 433 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 DOK1Q99704 481 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 CCDC77Q9BR77 488 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 SFXN3Q9BWM7 321 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 UCK2Q9BZX2 261 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 RPF2Q9H7B2 306 aaKnown RBP1.69□□□□□ -2.14
COPS3-217ENST00000583160 FBXO6Q9NRD1 293 aaPredicted RBP1.69□□□□□ -2.14
COPS3-217ENST00000583160 C20orf96Q9NUD7 363 aaPredicted RBP1.69□□□□□ -2.14
COPS3-217ENST00000583160 LYARQ9NX58 379 aaKnown RBP1.69□□□□□ -2.14
COPS3-217ENST00000583160 RNF14Q9UBS8 474 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 CES1P1Q9UKY3 287 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 TMCO1Q9UM00 188 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 BOKQ9UMX3 212 aaPredicted RBP1.69□□□□□ -2.14
COPS3-217ENST00000583160 CFL2Q9Y281 166 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 OR10H1Q9Y4A9 318 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 ASB4Q9Y574 426 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 ARFGEF3Q5TH69 2177 aa1.69□□□□□ -2.14
COPS3-217ENST00000583160 USF3Q68DE3 2245 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.68□□□□□ -2.149e-10■■■■■ 36.7
COPS3-217ENST00000583160 FBN3Q75N90 2809 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 ZANQ9Y493 2812 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 JMJD1CQ15652 2540 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 COL6A5A8TX70 2615 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 A0A096LNT2 108 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 A0A0G2JMM0 328 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 A0A1W2PPB8 328 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 A0A1W2PRS3 328 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 ZNF860A6NHJ4 632 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 OR6C70A6NIJ9 312 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 KIR3DP1A8MWS1 328 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 K7EPI3 171 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 PGRMC1O00264 195 aaKnown RBP1.68□□□□□ -2.14
COPS3-217ENST00000583160 CDC7O00311 574 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 PLPP1O14494 284 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 TP53I11O14683 189 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 ZNF207O43670 478 aaKnown RBP1.68□□□□□ -2.14
COPS3-217ENST00000583160 BCAS1O75363 584 aaPredicted RBP1.68□□□□□ -2.14
COPS3-217ENST00000583160 MFN2O95140 757 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 PSMG1O95456 288 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 GAPDHP04406 335 aaKnown RBP1.68□□□□□ -2.14
COPS3-217ENST00000583160 IL4P05112 153 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 PTMAP06454 111 aaKnown RBP1.68□□□□□ -2.14
COPS3-217ENST00000583160 TCP1P17987 556 aaKnown RBP1.68□□□□□ -2.14
COPS3-217ENST00000583160 COL8A2P25067 703 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 LCN1P31025 176 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 PPICP45877 212 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 SLCO1A2P46721 670 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 DNASE1L1P49184 302 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 CX3CR1P49238 355 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 CLDN18P56856 261 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 TAS2R39P59534 338 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 RAB8AP61006 207 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 NAA20P61599 178 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 BTN3A2P78410 334 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 PITPNAQ00169 270 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 LOXL1Q08397 574 aaPredicted RBP1.68□□□□□ -2.14
COPS3-217ENST00000583160 STX4Q12846 297 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms