RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 SERPINA2P20848 420 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 PSMA1P25786 263 aaKnown RBP13.02□□□□□ -0.33
CHD3-215ENST00000572750 MTNR1BP49286 362 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 ARF6P62330 175 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 EDDM3AQ14507 147 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 TRAM1Q15629 374 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 PIGYQ3MUY2 71 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 METTL11BQ5VVY1 283 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 LRRTM1Q86UE6 522 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 OR8H2Q8N162 312 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 NKAIN3Q8N8D7 197 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 C8orf46Q8TAG6 207 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 C22orf15Q8WYQ4 148 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 WDFY2Q96P53 400 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 NR1H4Q96RI1 486 aaPredicted RBP13.02□□□□□ -0.33
CHD3-215ENST00000572750 TBX15Q96SF7 602 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 FAM234AQ9H0X4 552 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 SIRPDQ9H106 197 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 CNTD2Q9H8S5 307 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 TCF7L1Q9HCS4 588 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 ING4Q9UNL4 249 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 MRPS28Q9Y2Q9 187 aaKnown RBP13.02□□□□□ -0.33
CHD3-215ENST00000572750 A0A1W2PP11 408 aa13.01□□□□□ -0.33
CHD3-215ENST00000572750 MEX3AA1L020 520 aaKnown RBP13.01□□□□□ -0.33
CHD3-215ENST00000572750 PSPNO60542 156 aa13.01□□□□□ -0.33
CHD3-215ENST00000572750 HTR3BO95264 441 aa13.01□□□□□ -0.33
CHD3-215ENST00000572750 OR3A1P47881 315 aa13.01□□□□□ -0.33
CHD3-215ENST00000572750 DLX1P56177 255 aa13.01□□□□□ -0.33
CHD3-215ENST00000572750 EDDM3BP56851 147 aa13.01□□□□□ -0.33
CHD3-215ENST00000572750 RPL31P62899 125 aaKnown RBP13.01□□□□□ -0.33
CHD3-215ENST00000572750 PRB3Q04118 309 aaPredicted RBP13.01□□□□□ -0.33
CHD3-215ENST00000572750 SCN1BQ07699 218 aa13.01□□□□□ -0.33
CHD3-215ENST00000572750 PDCD1Q15116 288 aa13.01□□□□□ -0.33
CHD3-215ENST00000572750 NEDD8Q15843 81 aa13.01□□□□□ -0.33
CHD3-215ENST00000572750 SLC22A6Q4U2R8 563 aa13.01□□□□□ -0.33
CHD3-215ENST00000572750 AWAT2Q6E213 333 aa13.01□□□□□ -0.33
CHD3-215ENST00000572750 ELP2Q6IA86 826 aa13.01□□□□□ -0.33
CHD3-215ENST00000572750 ASCL4Q6XD76 172 aa13.01□□□□□ -0.33
CHD3-215ENST00000572750 C17orf107Q6ZR85 190 aa13.01□□□□□ -0.33
CHD3-215ENST00000572750 OR4D6Q8NGJ1 314 aa13.01□□□□□ -0.33
CHD3-215ENST00000572750 PHYHIPQ92561 330 aa13.01□□□□□ -0.33
CHD3-215ENST00000572750 FCGR1BQ92637 280 aa13.01□□□□□ -0.33
CHD3-215ENST00000572750 RHOFQ9HBH0 211 aa13.01□□□□□ -0.33
CHD3-215ENST00000572750 IL36GQ9NZH8 169 aa13.01□□□□□ -0.33
CHD3-215ENST00000572750 GLS2Q9UI32 602 aa13.01□□□□□ -0.33
CHD3-215ENST00000572750 MGAM2Q2M2H8 2515 aa13□□□□□ -0.33
CHD3-215ENST00000572750 HSPB6O14558 160 aa13□□□□□ -0.33
CHD3-215ENST00000572750 SH2D1BO14796 132 aa13□□□□□ -0.33
CHD3-215ENST00000572750 ZNF44P15621 663 aa13□□□□□ -0.33
CHD3-215ENST00000572750 CALRP27797 417 aaKnown RBP13□□□□□ -0.33
CHD3-215ENST00000572750 GRK1Q15835 563 aa13□□□□□ -0.33
CHD3-215ENST00000572750 Q6P435 159 aa13□□□□□ -0.33
CHD3-215ENST00000572750 GLIPR1L1Q6UWM5 242 aa13□□□□□ -0.33
CHD3-215ENST00000572750 GDPD3Q7L5L3 318 aa13□□□□□ -0.33
CHD3-215ENST00000572750 VMO1Q7Z5L0 202 aa13□□□□□ -0.33
CHD3-215ENST00000572750 LYPD6Q86Y78 171 aa13□□□□□ -0.33
CHD3-215ENST00000572750 KIR3DL3Q8N743 410 aa13□□□□□ -0.33
CHD3-215ENST00000572750 OR4S1Q8NGB4 309 aa13□□□□□ -0.33
CHD3-215ENST00000572750 SNX22Q96L94 193 aa13□□□□□ -0.33
CHD3-215ENST00000572750 S100A13Q99584 98 aa13□□□□□ -0.33
CHD3-215ENST00000572750 SLC6A7Q99884 636 aa13□□□□□ -0.33
CHD3-215ENST00000572750 METTL9Q9H1A3 318 aa13□□□□□ -0.33
CHD3-215ENST00000572750 PPA2Q9H2U2 334 aa13□□□□□ -0.33
CHD3-215ENST00000572750 SIRT7Q9NRC8 400 aa13□□□□□ -0.33
CHD3-215ENST00000572750 ZNF581Q9P0T4 197 aa13□□□□□ -0.33
CHD3-215ENST00000572750 NUP50Q9UKX7 468 aa13□□□□□ -0.33
CHD3-215ENST00000572750 KPTNQ9Y664 436 aa13□□□□□ -0.33
CHD3-215ENST00000572750 SLC33A1O00400 549 aaPredicted RBP12.99□□□□□ -0.33
CHD3-215ENST00000572750 CCRL2O00421 344 aa12.99□□□□□ -0.33
CHD3-215ENST00000572750 TNFAIP8O95379 198 aa12.99□□□□□ -0.33
CHD3-215ENST00000572750 IFNA2P01563 188 aa12.99□□□□□ -0.33
CHD3-215ENST00000572750 CSTBP04080 98 aaKnown RBP12.99□□□□□ -0.33
CHD3-215ENST00000572750 SRMP19623 302 aa12.99□□□□□ -0.33
CHD3-215ENST00000572750 BMXP51813 675 aa12.99□□□□□ -0.33
CHD3-215ENST00000572750 RBM11P57052 281 aaKnown RBP12.99□□□□□ -0.33
CHD3-215ENST00000572750 SRSF2Q01130 221 aaKnown RBP12.99□□□□□ -0.33
CHD3-215ENST00000572750 ZNF273Q14593 569 aa12.99□□□□□ -0.33
CHD3-215ENST00000572750 RUSC1-AS1Q66K80 236 aa12.99□□□□□ -0.33
CHD3-215ENST00000572750 BRD3OSQ6XYD6 125 aa12.99□□□□□ -0.33
CHD3-215ENST00000572750 PDZD9Q8IXQ8 264 aa12.99□□□□□ -0.33
CHD3-215ENST00000572750 CMTM4Q8IZR5 234 aa12.99□□□□□ -0.33
CHD3-215ENST00000572750 Q8N7P7 452 aa12.99□□□□□ -0.33
CHD3-215ENST00000572750 TPRX1Q8N7U7 411 aa12.99□□□□□ -0.33
CHD3-215ENST00000572750 OR51T1Q8NGJ9 327 aa12.99□□□□□ -0.33
CHD3-215ENST00000572750 C1orf147Q96MC9 270 aaPredicted RBP12.99□□□□□ -0.33
CHD3-215ENST00000572750 OCEL1Q9H607 264 aa12.99□□□□□ -0.33
CHD3-215ENST00000572750 SEBOXQ9HB31 216 aaPredicted RBP12.99□□□□□ -0.33
CHD3-215ENST00000572750 ZNF69Q9UC07 566 aa12.99□□□□□ -0.33
CHD3-215ENST00000572750 ARL6IP5O75915 188 aa12.98□□□□□ -0.33
CHD3-215ENST00000572750 CCL3L1P16619 93 aa12.98□□□□□ -0.33
CHD3-215ENST00000572750 KLRD1Q13241 179 aa12.98□□□□□ -0.33
CHD3-215ENST00000572750 SCGB2A2Q13296 93 aa12.98□□□□□ -0.33
CHD3-215ENST00000572750 IL13RA2Q14627 380 aa12.98□□□□□ -0.33
CHD3-215ENST00000572750 ATXN7L3Q14CW9 347 aaPredicted RBP12.98□□□□□ -0.33
CHD3-215ENST00000572750 TMEM200BQ69YZ2 307 aa12.98□□□□□ -0.33
CHD3-215ENST00000572750 METAP1DQ6UB28 335 aaPredicted RBP12.98□□□□□ -0.33
CHD3-215ENST00000572750 TCF23Q7RTU1 214 aa12.98□□□□□ -0.33
CHD3-215ENST00000572750 CDH26Q8IXH8 852 aa12.98□□□□□ -0.33
CHD3-215ENST00000572750 BCL6BQ8N143 479 aaPredicted RBP12.98□□□□□ -0.33
CHD3-215ENST00000572750 OSR2Q8N2R0 312 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms