RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 ZSCAN4Q8NAM6 433 aaPredicted RBP13.8□□□□□ -0.2
RPL28-211ENST00000560881 H1FXQ92522 213 aaKnown RBP13.8□□□□□ -0.2
RPL28-211ENST00000560881 FCGR1BQ92637 280 aa13.8□□□□□ -0.2
RPL28-211ENST00000560881 THRSPQ92748 146 aa13.8□□□□□ -0.2
RPL28-211ENST00000560881 NUDT16L1Q9BRJ7 211 aaKnown RBP13.8□□□□□ -0.2
RPL28-211ENST00000560881 CNTD2Q9H8S5 307 aa13.8□□□□□ -0.2
RPL28-211ENST00000560881 TCF7L1Q9HCS4 588 aa13.8□□□□□ -0.2
RPL28-211ENST00000560881 INSIG2Q9Y5U4 225 aa13.8□□□□□ -0.2
RPL28-211ENST00000560881 NF1P21359 2839 aa13.79□□□□□ -0.2
RPL28-211ENST00000560881 CCRL2O00421 344 aa13.79□□□□□ -0.2
RPL28-211ENST00000560881 NDUFB7P17568 137 aa13.79□□□□□ -0.2
RPL28-211ENST00000560881 LRRC10Q5BKY1 277 aa13.79□□□□□ -0.2
RPL28-211ENST00000560881 THOC7Q6I9Y2 204 aaKnown RBP13.79□□□□□ -0.2
RPL28-211ENST00000560881 OR4D6Q8NGJ1 314 aa13.79□□□□□ -0.2
RPL28-211ENST00000560881 OR6Q1Q8NGQ2 317 aa13.79□□□□□ -0.2
RPL28-211ENST00000560881 RAB40AQ8WXH6 277 aa13.79□□□□□ -0.2
RPL28-211ENST00000560881 CPNE2Q96FN4 548 aaPredicted RBP13.79□□□□□ -0.2
RPL28-211ENST00000560881 MED30Q96HR3 178 aa13.79□□□□□ -0.2
RPL28-211ENST00000560881 SHARPINQ9H0F6 387 aa13.79□□□□□ -0.2
RPL28-211ENST00000560881 C7orf69Q9H7B7 122 aa13.79□□□□□ -0.2
RPL28-211ENST00000560881 TMEM160Q9NX00 188 aa13.79□□□□□ -0.2
RPL28-211ENST00000560881 OPN4Q9UHM6 478 aa13.79□□□□□ -0.2
RPL28-211ENST00000560881 PPIAL4CA0A0B4J2A2 164 aa13.79□□□□□ -0.2
RPL28-211ENST00000560881 A0A1W2PP11 408 aa13.79□□□□□ -0.2
RPL28-211ENST00000560881 HAND1O96004 215 aa13.79□□□□□ -0.2
RPL28-211ENST00000560881 SRMP19623 302 aa13.79□□□□□ -0.2
RPL28-211ENST00000560881 PSMA1P25786 263 aaKnown RBP13.79□□□□□ -0.2
RPL28-211ENST00000560881 CAPZA1P52907 286 aa13.79□□□□□ -0.2
RPL28-211ENST00000560881 CD300CQ08708 224 aa13.79□□□□□ -0.2
RPL28-211ENST00000560881 TRAM1Q15629 374 aa13.79□□□□□ -0.2
RPL28-211ENST00000560881 LYPD6Q86Y78 171 aa13.79□□□□□ -0.2
RPL28-211ENST00000560881 ZNF561Q8N587 486 aa13.79□□□□□ -0.2
RPL28-211ENST00000560881 ASCC1Q8N9N2 400 aaKnown RBP13.79□□□□□ -0.2
RPL28-211ENST00000560881 PNLDC1Q8NA58 520 aaKnown RBP13.79□□□□□ -0.2
RPL28-211ENST00000560881 PXT1Q8NFP0 134 aa13.79□□□□□ -0.2
RPL28-211ENST00000560881 ING4Q9UNL4 249 aa13.79□□□□□ -0.2
RPL28-211ENST00000560881 DSCAML1Q8TD84 2053 aa13.78□□□□□ -0.2
RPL28-211ENST00000560881 CRLF1O75462 422 aa13.78□□□□□ -0.2
RPL28-211ENST00000560881 SERPINA2P20848 420 aa13.78□□□□□ -0.2
RPL28-211ENST00000560881 ZNF146Q15072 292 aa13.78□□□□□ -0.2
RPL28-211ENST00000560881 RSU1Q15404 277 aa13.78□□□□□ -0.2
RPL28-211ENST00000560881 PIGYQ3MUY2 71 aa13.78□□□□□ -0.2
RPL28-211ENST00000560881 METAP1DQ6UB28 335 aaPredicted RBP13.78□□□□□ -0.2
RPL28-211ENST00000560881 CHAC2Q8WUX2 184 aa13.78□□□□□ -0.2
RPL28-211ENST00000560881 GFI1Q99684 422 aa13.78□□□□□ -0.2
RPL28-211ENST00000560881 CHST6Q9GZX3 395 aa13.78□□□□□ -0.2
RPL28-211ENST00000560881 ZNF581Q9P0T4 197 aa13.78□□□□□ -0.2
RPL28-211ENST00000560881 RPUSD1Q9UJJ7 312 aaKnown RBP13.78□□□□□ -0.2
RPL28-211ENST00000560881 CDC42EP3Q9UKI2 254 aa13.78□□□□□ -0.2
RPL28-211ENST00000560881 MRPS28Q9Y2Q9 187 aaKnown RBP13.78□□□□□ -0.2
RPL28-211ENST00000560881 SHISA3A0PJX4 238 aa13.77□□□□□ -0.21
RPL28-211ENST00000560881 TMEM82A0PJX8 343 aa13.77□□□□□ -0.21
RPL28-211ENST00000560881 MEX3AA1L020 520 aaKnown RBP13.77□□□□□ -0.21
RPL28-211ENST00000560881 SIRPB1O00241 398 aa13.77□□□□□ -0.21
RPL28-211ENST00000560881 ENSAO43768 121 aaKnown RBP13.77□□□□□ -0.21
RPL28-211ENST00000560881 PSPNO60542 156 aa13.77□□□□□ -0.21
RPL28-211ENST00000560881 ZNF737O75373 536 aa13.77□□□□□ -0.21
RPL28-211ENST00000560881 HTR3BO95264 441 aa13.77□□□□□ -0.21
RPL28-211ENST00000560881 HOXB4P17483 251 aaPredicted RBP13.77□□□□□ -0.21
RPL28-211ENST00000560881 GATA3P23771 443 aa13.77□□□□□ -0.21
RPL28-211ENST00000560881 CD40LGP29965 261 aa13.77□□□□□ -0.21
RPL28-211ENST00000560881 FGF12P61328 243 aa13.77□□□□□ -0.21
RPL28-211ENST00000560881 CHRFAM7AQ494W8 412 aa13.77□□□□□ -0.21
RPL28-211ENST00000560881 SYT6Q5T7P8 510 aaPredicted RBP13.77□□□□□ -0.21
RPL28-211ENST00000560881 BTNL3Q6UXE8 466 aa13.77□□□□□ -0.21
RPL28-211ENST00000560881 NKAIN3Q8N8D7 197 aa13.77□□□□□ -0.21
RPL28-211ENST00000560881 YIPF6Q96EC8 236 aa13.77□□□□□ -0.21
RPL28-211ENST00000560881 BEX2Q9BXY8 128 aa13.77□□□□□ -0.21
RPL28-211ENST00000560881 NAV3Q8IVL0 2385 aa13.76□□□□□ -0.21
RPL28-211ENST00000560881 KIR2DS1A0A191URI9 304 aa13.76□□□□□ -0.21
RPL28-211ENST00000560881 OR2H2O95918 312 aa13.76□□□□□ -0.21
RPL28-211ENST00000560881 TK1P04183 234 aa13.76□□□□□ -0.21
RPL28-211ENST00000560881 CAV3P56539 151 aa13.76□□□□□ -0.21
RPL28-211ENST00000560881 IFITM3Q01628 133 aa13.76□□□□□ -0.21
RPL28-211ENST00000560881 PAX8Q06710 450 aa13.76□□□□□ -0.21
RPL28-211ENST00000560881 SCN1BQ07699 218 aa13.76□□□□□ -0.21
RPL28-211ENST00000560881 SLC22A6Q4U2R8 563 aa13.76□□□□□ -0.21
RPL28-211ENST00000560881 SPIN3Q5JUX0 258 aa13.76□□□□□ -0.21
RPL28-211ENST00000560881 CD276Q5ZPR3 534 aa13.76□□□□□ -0.21
RPL28-211ENST00000560881 AWAT2Q6E213 333 aa13.76□□□□□ -0.21
RPL28-211ENST00000560881 CD200R1LQ6Q8B3 271 aa13.76□□□□□ -0.21
RPL28-211ENST00000560881 FIP1L1Q6UN15 594 aaKnown RBP13.76□□□□□ -0.21
RPL28-211ENST00000560881 GLIPR1L1Q6UWM5 242 aa13.76□□□□□ -0.21
RPL28-211ENST00000560881 ASCL4Q6XD76 172 aa13.76□□□□□ -0.21
RPL28-211ENST00000560881 C17orf107Q6ZR85 190 aa13.76□□□□□ -0.21
RPL28-211ENST00000560881 OR4M1Q8NGD0 313 aa13.76□□□□□ -0.21
RPL28-211ENST00000560881 DCTN5Q9BTE1 182 aa13.76□□□□□ -0.21
RPL28-211ENST00000560881 METTL9Q9H1A3 318 aa13.76□□□□□ -0.21
RPL28-211ENST00000560881 KCNK15Q9H427 330 aa13.76□□□□□ -0.21
RPL28-211ENST00000560881 C19orf12Q9NSK7 152 aa13.76□□□□□ -0.21
RPL28-211ENST00000560881 AK6Q9Y3D8 172 aaKnown RBP13.76□□□□□ -0.21
RPL28-211ENST00000560881 AUP1Q9Y679 476 aa13.76□□□□□ -0.21
RPL28-211ENST00000560881 MXRA5Q9NR99 2828 aa13.76□□□□□ -0.21
RPL28-211ENST00000560881 J3QLI3 93 aa13.75□□□□□ -0.21
RPL28-211ENST00000560881 CHRM2P08172 466 aa13.75□□□□□ -0.21
RPL28-211ENST00000560881 HNF1AP20823 631 aa13.75□□□□□ -0.21
RPL28-211ENST00000560881 GABRR1P24046 479 aa13.75□□□□□ -0.21
RPL28-211ENST00000560881 MTNR1BP49286 362 aa13.75□□□□□ -0.21
RPL28-211ENST00000560881 DLX1P56177 255 aa13.75□□□□□ -0.21
RPL28-211ENST00000560881 C22orf42Q6IC83 251 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms