RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 SGPP2Q8IWX5 399 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 OR2J1Q9GZK6 312 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 KIF25Q9UIL4 384 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 EDARQ9UNE0 448 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 MAP1BP46821 2468 aaKnown RBP9.04□□□□□ -0.96
TPM1-210ENST00000558264 GVINP1Q7Z2Y8 2422 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 DCHS1Q96JQ0 3298 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 TRAV39A0A0B4J263 110 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 RRP8O43159 456 aaKnown RBP9.04□□□□□ -0.96
TPM1-210ENST00000558264 SCTP09683 121 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 CD82P27701 267 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 IAH1Q2TAA2 248 aaPredicted RBP9.04□□□□□ -0.96
TPM1-210ENST00000558264 NSUN5P2Q63ZY6 315 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 C9orf106Q8NAJ2 232 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 GALNT11Q8NCW6 608 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 LRRC20Q8TCA0 184 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 OR5P3Q8WZ94 311 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 MRPS24Q96EL2 167 aaKnown RBP9.04□□□□□ -0.96
TPM1-210ENST00000558264 GMPPAQ96IJ6 420 aaPredicted RBP9.04□□□□□ -0.96
TPM1-210ENST00000558264 LINC00052Q96N35 136 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 TECTBQ96PL2 329 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 REG4Q9BYZ8 158 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 NMES1Q9C002 83 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 NARFLQ9H6Q4 476 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 CRYM-AS1A6NIL9 109 aa9.03□□□□□ -0.96
TPM1-210ENST00000558264 CST4P01036 141 aa9.03□□□□□ -0.96
TPM1-210ENST00000558264 CTSDP07339 412 aaPredicted RBP9.03□□□□□ -0.96
TPM1-210ENST00000558264 UBE2NP61088 152 aaKnown RBP9.03□□□□□ -0.96
TPM1-210ENST00000558264 STK11Q15831 433 aa9.03□□□□□ -0.96
TPM1-210ENST00000558264 ELP2Q6IA86 826 aa9.03□□□□□ -0.96
TPM1-210ENST00000558264 CLEC9AQ6UXN8 241 aa9.03□□□□□ -0.96
TPM1-210ENST00000558264 POC1AQ8NBT0 407 aa9.03□□□□□ -0.96
TPM1-210ENST00000558264 UBALD1Q8TB05 177 aa9.03□□□□□ -0.96
TPM1-210ENST00000558264 RTN4IP1Q8WWV3 396 aaPredicted RBP9.03□□□□□ -0.96
TPM1-210ENST00000558264 OR2S2Q9NQN1 319 aa9.03□□□□□ -0.96
TPM1-210ENST00000558264 CLCF1Q9UBD9 225 aa9.03□□□□□ -0.96
TPM1-210ENST00000558264 FZR1Q9UM11 496 aa9.03□□□□□ -0.96
TPM1-210ENST00000558264 PTPRZ1P23471 2315 aaPredicted RBP9.03□□□□□ -0.96
TPM1-210ENST00000558264 MUC6Q6W4X9 2439 aa9.03□□□□□ -0.96
TPM1-210ENST00000558264 FGF12P61328 243 aa9.03□□□□□ -0.96
TPM1-210ENST00000558264 UBA52P62987 128 aaKnown RBP9.03□□□□□ -0.96
TPM1-210ENST00000558264 ZNF345Q14585 488 aa9.03□□□□□ -0.96
TPM1-210ENST00000558264 TBC1D28Q2M2D7 210 aa9.03□□□□□ -0.96
TPM1-210ENST00000558264 ZNF585AQ6P3V2 769 aa9.03□□□□□ -0.96
TPM1-210ENST00000558264 PDZD9Q8IXQ8 264 aa9.03□□□□□ -0.96
TPM1-210ENST00000558264 MKXQ8IYA7 352 aa9.03□□□□□ -0.96
TPM1-210ENST00000558264 PRSS33Q8NF86 280 aa9.03□□□□□ -0.96
TPM1-210ENST00000558264 NANOS1Q8WY41 292 aaKnown RBP9.03□□□□□ -0.96
TPM1-210ENST00000558264 C2orf50Q96LR7 162 aa9.03□□□□□ -0.96
TPM1-210ENST00000558264 TAAR6Q96RI8 345 aa9.03□□□□□ -0.96
TPM1-210ENST00000558264 SLC2A9Q9NRM0 540 aa9.03□□□□□ -0.96
TPM1-210ENST00000558264 LSM5Q9Y4Y9 91 aaKnown RBP9.03□□□□□ -0.96
TPM1-210ENST00000558264 SURF2Q15527 256 aaPredicted RBP9.02□□□□□ -0.97
TPM1-210ENST00000558264 GGNBP1Q5YKI7 109 aa9.02□□□□□ -0.97
TPM1-210ENST00000558264 DHRS11Q6UWP2 260 aa9.02□□□□□ -0.97
TPM1-210ENST00000558264 MEX3BQ6ZN04 569 aaKnown RBP9.02□□□□□ -0.97
TPM1-210ENST00000558264 C20orf204Q6ZNR8 217 aa9.02□□□□□ -0.97
TPM1-210ENST00000558264 FAM214BQ7L5A3 538 aa9.02□□□□□ -0.97
TPM1-210ENST00000558264 LYZL2Q7Z4W2 148 aa9.02□□□□□ -0.97
TPM1-210ENST00000558264 WDR86Q86TI4 376 aa9.02□□□□□ -0.97
TPM1-210ENST00000558264 ARPC5LQ9BPX5 153 aa9.02□□□□□ -0.97
TPM1-210ENST00000558264 C1orf123Q9NWV4 160 aa9.02□□□□□ -0.97
TPM1-210ENST00000558264 RP1L1Q8IWN7 2480 aaPredicted RBP9.02□□□□□ -0.97
TPM1-210ENST00000558264 ATMQ13315 3056 aa9.02□□□□□ -0.97
TPM1-210ENST00000558264 MFSD2BA6NFX1 497 aa9.02□□□□□ -0.97
TPM1-210ENST00000558264 TM4SF5O14894 197 aa9.02□□□□□ -0.97
TPM1-210ENST00000558264 DIRAS3O95661 229 aa9.02□□□□□ -0.97
TPM1-210ENST00000558264 ZNF14P17017 642 aaPredicted RBP9.02□□□□□ -0.97
TPM1-210ENST00000558264 GLP1RP43220 463 aa9.02□□□□□ -0.97
TPM1-210ENST00000558264 HERV-K104P61576 105 aa9.02□□□□□ -0.97
TPM1-210ENST00000558264 CYCSP99999 105 aaKnown RBP9.02□□□□□ -0.97
TPM1-210ENST00000558264 CXorf67Q86X51 503 aaPredicted RBP9.02□□□□□ -0.97
TPM1-210ENST00000558264 OR5A2Q8NGI9 324 aa9.02□□□□□ -0.97
TPM1-210ENST00000558264 SECTM1Q8WVN6 248 aa9.02□□□□□ -0.97
TPM1-210ENST00000558264 CDH20Q9HBT6 801 aa9.02□□□□□ -0.97
TPM1-210ENST00000558264 PCDHB16Q9NRJ7 776 aa9.02□□□□□ -0.97
TPM1-210ENST00000558264 PFDN2Q9UHV9 154 aa9.02□□□□□ -0.97
TPM1-210ENST00000558264 ZNF175Q9Y473 711 aa9.02□□□□□ -0.97
TPM1-210ENST00000558264 KCNMB2Q9Y691 235 aa9.02□□□□□ -0.97
TPM1-210ENST00000558264 NBEAQ8NFP9 2946 aa9.01□□□□□ -0.97
TPM1-210ENST00000558264 TRAV17A0A0B4J275 112 aa9.01□□□□□ -0.97
TPM1-210ENST00000558264 H0YL77 283 aa9.01□□□□□ -0.97
TPM1-210ENST00000558264 PHF1O43189 567 aaPredicted RBP9.01□□□□□ -0.97
TPM1-210ENST00000558264 SMPD2O60906 423 aa9.01□□□□□ -0.97
TPM1-210ENST00000558264 PPP1CBP62140 327 aa9.01□□□□□ -0.97
TPM1-210ENST00000558264 HERPUD1Q15011 391 aa9.01□□□□□ -0.97
TPM1-210ENST00000558264 SPIN3Q5JUX0 258 aa9.01□□□□□ -0.97
TPM1-210ENST00000558264 OR2A2Q6IF42 318 aa9.01□□□□□ -0.97
TPM1-210ENST00000558264 PRR18Q8N4B5 295 aa9.01□□□□□ -0.97
TPM1-210ENST00000558264 SUMF2Q8NBJ7 301 aa9.01□□□□□ -0.97
TPM1-210ENST00000558264 SLC25A40Q8TBP6 338 aa9.01□□□□□ -0.97
TPM1-210ENST00000558264 NAA60Q9H7X0 242 aa9.01□□□□□ -0.97
TPM1-210ENST00000558264 ZC4H2Q9NQZ6 224 aa9.01□□□□□ -0.97
TPM1-210ENST00000558264 PTPRBP23467 1997 aa9.01□□□□□ -0.97
TPM1-210ENST00000558264 TNFSF12O43508 249 aa9.01□□□□□ -0.97
TPM1-210ENST00000558264 SNAPC5O75971 98 aa9.01□□□□□ -0.97
TPM1-210ENST00000558264 CRYZL1O95825 349 aa9.01□□□□□ -0.97
TPM1-210ENST00000558264 PPYP01298 95 aa9.01□□□□□ -0.97
TPM1-210ENST00000558264 IGHG3P01860 377 aa9.01□□□□□ -0.97
TPM1-210ENST00000558264 GRPP07492 148 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms