RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 TMEM59Q9BXS4 323 aa14.5□□□□□ -0.09
TUBB3-211ENST00000556536 PATZ1Q9HBE1 687 aaKnown RBP14.5□□□□□ -0.09
TUBB3-211ENST00000556536 MAB21L2Q9Y586 359 aa14.5□□□□□ -0.09
TUBB3-211ENST00000556536 A0A0A6YYD4 124 aa14.49□□□□□ -0.09
TUBB3-211ENST00000556536 SIRPB1O00241 398 aa14.49□□□□□ -0.09
TUBB3-211ENST00000556536 SH2D1BO14796 132 aa14.49□□□□□ -0.09
TUBB3-211ENST00000556536 TMPRSS2O15393 492 aa14.49□□□□□ -0.09
TUBB3-211ENST00000556536 NDUFA2O43678 99 aa14.49□□□□□ -0.09
TUBB3-211ENST00000556536 OR2H2O95918 312 aa14.49□□□□□ -0.09
TUBB3-211ENST00000556536 WNT2P09544 360 aa14.49□□□□□ -0.09
TUBB3-211ENST00000556536 FOSL1P15407 271 aa14.49□□□□□ -0.09
TUBB3-211ENST00000556536 RPS2P15880 293 aaKnown RBP14.49□□□□□ -0.09
TUBB3-211ENST00000556536 ZNF182P17025 639 aaPredicted RBP14.49□□□□□ -0.09
TUBB3-211ENST00000556536 SEC61A1P61619 476 aaKnown RBP14.49□□□□□ -0.09
TUBB3-211ENST00000556536 COL10A1Q03692 680 aa14.49□□□□□ -0.09
TUBB3-211ENST00000556536 IKZF1Q13422 519 aa14.49□□□□□ -0.09
TUBB3-211ENST00000556536 FGFRL1Q8N441 504 aa14.49□□□□□ -0.09
TUBB3-211ENST00000556536 ZNRF1Q8ND25 227 aa14.49□□□□□ -0.09
TUBB3-211ENST00000556536 MAPK1IP1LQ8NDC0 245 aa14.49□□□□□ -0.09
TUBB3-211ENST00000556536 CYYR1Q96J86 154 aa14.49□□□□□ -0.09
TUBB3-211ENST00000556536 NICN1Q9BSH3 213 aa14.49□□□□□ -0.09
TUBB3-211ENST00000556536 DNTTIP1Q9H147 329 aa14.49□□□□□ -0.09
TUBB3-211ENST00000556536 LPAR5Q9H1C0 372 aa14.49□□□□□ -0.09
TUBB3-211ENST00000556536 ZNF665Q9H7R5 613 aa14.49□□□□□ -0.09
TUBB3-211ENST00000556536 SEBOXQ9HB31 216 aaPredicted RBP14.49□□□□□ -0.09
TUBB3-211ENST00000556536 KAAG1Q9UBP8 84 aa14.49□□□□□ -0.09
TUBB3-211ENST00000556536 MIOXQ9UGB7 285 aa14.49□□□□□ -0.09
TUBB3-211ENST00000556536 RAB22AQ9UL26 194 aa14.49□□□□□ -0.09
TUBB3-211ENST00000556536 PCDHB10Q9UN67 800 aa14.49□□□□□ -0.09
TUBB3-211ENST00000556536 TMEM82A0PJX8 343 aa14.48□□□□□ -0.09
TUBB3-211ENST00000556536 NKX6-3A6NJ46 265 aa14.48□□□□□ -0.09
TUBB3-211ENST00000556536 DEGS1O15121 323 aa14.48□□□□□ -0.09
TUBB3-211ENST00000556536 SIGLEC5O15389 551 aa14.48□□□□□ -0.09
TUBB3-211ENST00000556536 CHRM2P08172 466 aa14.48□□□□□ -0.09
TUBB3-211ENST00000556536 ZNF44P15621 663 aa14.48□□□□□ -0.09
TUBB3-211ENST00000556536 GABRR1P24046 479 aa14.48□□□□□ -0.09
TUBB3-211ENST00000556536 RANBP1P43487 201 aa14.48□□□□□ -0.09
TUBB3-211ENST00000556536 ZNF841Q6ZN19 808 aa14.48□□□□□ -0.09
TUBB3-211ENST00000556536 CIARTQ8N365 385 aaPredicted RBP14.48□□□□□ -0.09
TUBB3-211ENST00000556536 NEIL1Q96FI4 390 aaPredicted RBP14.48□□□□□ -0.09
TUBB3-211ENST00000556536 DCUN1D5Q9BTE7 237 aa14.48□□□□□ -0.09
TUBB3-211ENST00000556536 TM2D1Q9BX74 207 aa14.48□□□□□ -0.09
TUBB3-211ENST00000556536 CCDC59Q9P031 241 aaKnown RBP14.48□□□□□ -0.09
TUBB3-211ENST00000556536 ABRACLQ9P1F3 81 aa14.48□□□□□ -0.09
TUBB3-211ENST00000556536 GLS2Q9UI32 602 aa14.48□□□□□ -0.09
TUBB3-211ENST00000556536 TRAV24A0A0B4J272 114 aa14.47□□□□□ -0.09
TUBB3-211ENST00000556536 PSPNO60542 156 aa14.47□□□□□ -0.09
TUBB3-211ENST00000556536 TMEM127O75204 238 aa14.47□□□□□ -0.09
TUBB3-211ENST00000556536 ZNF737O75373 536 aa14.47□□□□□ -0.09
TUBB3-211ENST00000556536 OR7C1O76099 320 aaPredicted RBP14.47□□□□□ -0.09
TUBB3-211ENST00000556536 RAB6AP20340 208 aa14.47□□□□□ -0.09
TUBB3-211ENST00000556536 IL13RA1P78552 427 aa14.47□□□□□ -0.09
TUBB3-211ENST00000556536 LOXL1Q08397 574 aaPredicted RBP14.47□□□□□ -0.09
TUBB3-211ENST00000556536 SIGIRRQ6IA17 410 aa14.47□□□□□ -0.09
TUBB3-211ENST00000556536 SLC36A1Q7Z2H8 476 aa14.47□□□□□ -0.09
TUBB3-211ENST00000556536 RTN4RL2Q86UN3 420 aa14.47□□□□□ -0.09
TUBB3-211ENST00000556536 PTX4Q96A99 478 aa14.47□□□□□ -0.09
TUBB3-211ENST00000556536 KCTD12Q96CX2 325 aaKnown RBP14.47□□□□□ -0.09
TUBB3-211ENST00000556536 SLC25A38Q96DW6 304 aa14.47□□□□□ -0.09
TUBB3-211ENST00000556536 MED30Q96HR3 178 aa14.47□□□□□ -0.09
TUBB3-211ENST00000556536 GSX1Q9H4S2 264 aaPredicted RBP14.47□□□□□ -0.09
TUBB3-211ENST00000556536 BATF3Q9NR55 127 aa14.47□□□□□ -0.09
TUBB3-211ENST00000556536 SPATA2Q9UM82 520 aa14.47□□□□□ -0.09
TUBB3-211ENST00000556536 ETV7Q9Y603 341 aa14.47□□□□□ -0.09
TUBB3-211ENST00000556536 H7C1Q1 480 aa14.46□□□□□ -0.09
TUBB3-211ENST00000556536 SLC33A1O00400 549 aaPredicted RBP14.46□□□□□ -0.09
TUBB3-211ENST00000556536 DVL1O14640 695 aa14.46□□□□□ -0.09
TUBB3-211ENST00000556536 SOCS1O15524 211 aa14.46□□□□□ -0.09
TUBB3-211ENST00000556536 LMO1P25800 156 aa14.46□□□□□ -0.09
TUBB3-211ENST00000556536 SOX6P35712 828 aa14.46□□□□□ -0.09
TUBB3-211ENST00000556536 PITPNBP48739 271 aa14.46□□□□□ -0.09
TUBB3-211ENST00000556536 SCAND1P57086 179 aa14.46□□□□□ -0.09
TUBB3-211ENST00000556536 MPV17LQ2QL34 196 aa14.46□□□□□ -0.09
TUBB3-211ENST00000556536 BRICD5Q6PL45 260 aa14.46□□□□□ -0.09
TUBB3-211ENST00000556536 C17orf107Q6ZR85 190 aa14.46□□□□□ -0.09
TUBB3-211ENST00000556536 LINC00596Q86U02 117 aa14.46□□□□□ -0.09
TUBB3-211ENST00000556536 ZNF561Q8N587 486 aa14.46□□□□□ -0.09
TUBB3-211ENST00000556536 FAM89BQ8N5H3 189 aa14.46□□□□□ -0.09
TUBB3-211ENST00000556536 ASCC1Q8N9N2 400 aaKnown RBP14.46□□□□□ -0.09
TUBB3-211ENST00000556536 TMEM185AQ8NFB2 350 aa14.46□□□□□ -0.09
TUBB3-211ENST00000556536 OR4S1Q8NGB4 309 aa14.46□□□□□ -0.09
TUBB3-211ENST00000556536 OR8B3Q8NGG8 313 aa14.46□□□□□ -0.09
TUBB3-211ENST00000556536 OR8B2Q96RD0 313 aa14.46□□□□□ -0.09
TUBB3-211ENST00000556536 URM1Q9BTM9 101 aaKnown RBP14.46□□□□□ -0.09
TUBB3-211ENST00000556536 MRI1Q9BV20 369 aa14.46□□□□□ -0.09
TUBB3-211ENST00000556536 SLIRPQ9GZT3 109 aaKnown RBP14.46□□□□□ -0.09
TUBB3-211ENST00000556536 CHST6Q9GZX3 395 aa14.46□□□□□ -0.09
TUBB3-211ENST00000556536 SHARPINQ9H0F6 387 aa14.46□□□□□ -0.09
TUBB3-211ENST00000556536 IFT22Q9H7X7 185 aa14.46□□□□□ -0.09
TUBB3-211ENST00000556536 COMMD3Q9UBI1 195 aa14.46□□□□□ -0.09
TUBB3-211ENST00000556536 FAM90A10PA6NDY2 464 aa14.45□□□□□ -0.1
TUBB3-211ENST00000556536 FAM90A18PA6NE21 464 aa14.45□□□□□ -0.1
TUBB3-211ENST00000556536 FAM90A16PA6NEW6 464 aa14.45□□□□□ -0.1
TUBB3-211ENST00000556536 FAM90A20PA6NIJ5 464 aa14.45□□□□□ -0.1
TUBB3-211ENST00000556536 FAM90A8PA6NJQ4 464 aa14.45□□□□□ -0.1
TUBB3-211ENST00000556536 FAM90A7PA6NKC0 464 aa14.45□□□□□ -0.1
TUBB3-211ENST00000556536 FOXI3A8MTJ6 420 aaPredicted RBP14.45□□□□□ -0.1
TUBB3-211ENST00000556536 FAM90A22PA8MWA6 464 aa14.45□□□□□ -0.1
TUBB3-211ENST00000556536 FAM90A12PA8MX19 464 aa14.45□□□□□ -0.1
TUBB3-211ENST00000556536 FAM90A5PA8MXJ8 464 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms