RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 A6NJ64 397 aa10.4□□□□□ -0.74
SHMT2-221ENST00000555773 CEACAM18A8MTB9 384 aa10.4□□□□□ -0.74
SHMT2-221ENST00000555773 TMPRSS2O15393 492 aa10.4□□□□□ -0.74
SHMT2-221ENST00000555773 ADAM20O43506 726 aa10.4□□□□□ -0.74
SHMT2-221ENST00000555773 OR7C1O76099 320 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-221ENST00000555773 OR2H2O95918 312 aa10.4□□□□□ -0.74
SHMT2-221ENST00000555773 HEXAP06865 529 aa10.4□□□□□ -0.74
SHMT2-221ENST00000555773 ZNF44P15621 663 aa10.4□□□□□ -0.74
SHMT2-221ENST00000555773 AMY2BP19961 511 aa10.4□□□□□ -0.74
SHMT2-221ENST00000555773 FUT3P21217 361 aa10.4□□□□□ -0.74
SHMT2-221ENST00000555773 USF1P22415 310 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-221ENST00000555773 EFNB2P52799 333 aa10.4□□□□□ -0.74
SHMT2-221ENST00000555773 SNU13P55769 128 aaKnown RBP10.4□□□□□ -0.74
SHMT2-221ENST00000555773 SCN1BQ07699 218 aa10.4□□□□□ -0.74
SHMT2-221ENST00000555773 IKZF1Q13422 519 aa10.4□□□□□ -0.74
SHMT2-221ENST00000555773 C11orf91Q3C1V1 193 aa10.4□□□□□ -0.74
SHMT2-221ENST00000555773 NLRC3Q7RTR2 1065 aa10.4□□□□□ -0.74
SHMT2-221ENST00000555773 KRTAP1-3Q8IUG1 177 aa10.4□□□□□ -0.74
SHMT2-221ENST00000555773 SAMD12Q8N8I0 201 aa10.4□□□□□ -0.74
SHMT2-221ENST00000555773 OR5D13Q8NGL4 314 aa10.4□□□□□ -0.74
SHMT2-221ENST00000555773 MCFD2Q8NI22 146 aa10.4□□□□□ -0.74
SHMT2-221ENST00000555773 PHF21AQ96BD5 680 aa10.4□□□□□ -0.74
SHMT2-221ENST00000555773 NEIL1Q96FI4 390 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-221ENST00000555773 S100A16Q96FQ6 103 aaKnown RBP10.4□□□□□ -0.74
SHMT2-221ENST00000555773 NEDD4LQ96PU5 975 aa10.4□□□□□ -0.74
SHMT2-221ENST00000555773 FAM234AQ9H0X4 552 aa10.4□□□□□ -0.74
SHMT2-221ENST00000555773 ATG5Q9H1Y0 275 aa10.4□□□□□ -0.74
SHMT2-221ENST00000555773 KCNK15Q9H427 330 aa10.4□□□□□ -0.74
SHMT2-221ENST00000555773 RHBDL2Q9NX52 303 aa10.4□□□□□ -0.74
SHMT2-221ENST00000555773 MAB21L2Q9Y586 359 aa10.4□□□□□ -0.74
SHMT2-221ENST00000555773 CHD3Q12873 2000 aaKnown RBP10.4□□□□□ -0.75
SHMT2-221ENST00000555773 K7N7A8 449 aa10.39□□□□□ -0.75
SHMT2-221ENST00000555773 GPR37O15354 613 aa10.39□□□□□ -0.75
SHMT2-221ENST00000555773 NDUFB3O43676 98 aa10.39□□□□□ -0.75
SHMT2-221ENST00000555773 APOA1P02647 267 aa10.39□□□□□ -0.75
SHMT2-221ENST00000555773 GABRR1P24046 479 aa10.39□□□□□ -0.75
SHMT2-221ENST00000555773 BLVRBP30043 206 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-221ENST00000555773 KCNJ3P48549 501 aa10.39□□□□□ -0.75
SHMT2-221ENST00000555773 NPY4RP50391 375 aa10.39□□□□□ -0.75
SHMT2-221ENST00000555773 LMO4P61968 165 aa10.39□□□□□ -0.75
SHMT2-221ENST00000555773 COL10A1Q03692 680 aa10.39□□□□□ -0.75
SHMT2-221ENST00000555773 LOXL1Q08397 574 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-221ENST00000555773 PLA2G7Q13093 441 aa10.39□□□□□ -0.75
SHMT2-221ENST00000555773 RBM39Q14498 530 aaKnown RBP10.39□□□□□ -0.75
SHMT2-221ENST00000555773 ARL6IP1Q15041 203 aa10.39□□□□□ -0.75
SHMT2-221ENST00000555773 UBE2NLQ5JXB2 153 aa10.39□□□□□ -0.75
SHMT2-221ENST00000555773 LYPD2Q6UXB3 125 aa10.39□□□□□ -0.75
SHMT2-221ENST00000555773 OR8B3Q8NGG8 313 aa10.39□□□□□ -0.75
SHMT2-221ENST00000555773 RAB39BQ96DA2 213 aa10.39□□□□□ -0.75
SHMT2-221ENST00000555773 Q96MF0 132 aa10.39□□□□□ -0.75
SHMT2-221ENST00000555773 GAFA1Q96PS6 74 aa10.39□□□□□ -0.75
SHMT2-221ENST00000555773 OR8B2Q96RD0 313 aa10.39□□□□□ -0.75
SHMT2-221ENST00000555773 NUDT16L1Q9BRJ7 211 aaKnown RBP10.39□□□□□ -0.75
SHMT2-221ENST00000555773 REG4Q9BYZ8 158 aa10.39□□□□□ -0.75
SHMT2-221ENST00000555773 DIABLOQ9NR28 239 aa10.39□□□□□ -0.75
SHMT2-221ENST00000555773 HSF4Q9ULV5 492 aa10.39□□□□□ -0.75
SHMT2-221ENST00000555773 PDZD2O15018 2839 aa10.39□□□□□ -0.75
SHMT2-221ENST00000555773 PRRC2AP48634 2157 aaKnown RBP10.39□□□□□ -0.75
SHMT2-221ENST00000555773 TRAV24A0A0B4J272 114 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 IGHV4-61A0A0C4DH41 118 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 MCRIP1C9JLW8 97 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 F5H0A9 414 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-221ENST00000555773 RAB27BO00194 218 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 SLC33A1O00400 549 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-221ENST00000555773 PDCD6O75340 191 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 ZNF737O75373 536 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 IGHV2-5P01817 119 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 TK1P04183 234 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 RPS2P15880 293 aaKnown RBP10.38□□□□□ -0.75
SHMT2-221ENST00000555773 VEGFCP49767 419 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 TMEM50BP56557 158 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 PDCD1Q15116 288 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 CNPY1Q3B7I2 92 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 LRRC10Q5BKY1 277 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 ATAD3CQ5T2N8 411 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 SIGIRRQ6IA17 410 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 C17orf107Q6ZR85 190 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 Q6ZTK2 550 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 CMTM4Q8IZR5 234 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 SUMF2Q8NBJ7 301 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 ZNRF1Q8ND25 227 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 OR10R2Q8NGX6 335 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 CLDND2Q8NHS1 167 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 SLC25A38Q96DW6 304 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 NICN1Q9BSH3 213 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 C6orf62Q9GZU0 229 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-221ENST00000555773 PLEKHJ1Q9NW61 149 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 RCC2Q9P258 522 aaKnown RBP10.38□□□□□ -0.75
SHMT2-221ENST00000555773 ADAM30Q9UKF2 790 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 ITGB1BP2Q9UKP3 347 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 PEX16Q9Y5Y5 336 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 CSMD2Q7Z408 3487 aa10.38□□□□□ -0.75
SHMT2-221ENST00000555773 A0A0A6YYD4 124 aa10.37□□□□□ -0.75
SHMT2-221ENST00000555773 TMEM82A0PJX8 343 aa10.37□□□□□ -0.75
SHMT2-221ENST00000555773 FUOMA2VDF0 154 aa10.37□□□□□ -0.75
SHMT2-221ENST00000555773 FOXI3A8MTJ6 420 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-221ENST00000555773 SIRPB1O00241 398 aa10.37□□□□□ -0.75
SHMT2-221ENST00000555773 CTDSP2O14595 271 aa10.37□□□□□ -0.75
SHMT2-221ENST00000555773 DVL1O14640 695 aa10.37□□□□□ -0.75
SHMT2-221ENST00000555773 MGST3O14880 152 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms