RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 CLDND2Q8NHS1 167 aa8.5□□□□□ -1.05
SYNE2-215ENST00000554997 Q96M66 194 aa8.5□□□□□ -1.05
SYNE2-215ENST00000554997 Q96MF0 132 aa8.5□□□□□ -1.05
SYNE2-215ENST00000554997 GAFA1Q96PS6 74 aa8.5□□□□□ -1.05
SYNE2-215ENST00000554997 GAL3ST1Q99999 423 aa8.5□□□□□ -1.05
SYNE2-215ENST00000554997 TMEM59Q9BXS4 323 aa8.5□□□□□ -1.05
SYNE2-215ENST00000554997 SLIRPQ9GZT3 109 aaKnown RBP8.5□□□□□ -1.05
SYNE2-215ENST00000554997 FAM234AQ9H0X4 552 aa8.5□□□□□ -1.05
SYNE2-215ENST00000554997 LPAR5Q9H1C0 372 aa8.5□□□□□ -1.05
SYNE2-215ENST00000554997 CCDC59Q9P031 241 aaKnown RBP8.5□□□□□ -1.05
SYNE2-215ENST00000554997 MAB21L2Q9Y586 359 aa8.5□□□□□ -1.05
SYNE2-215ENST00000554997 DYSFO75923 2080 aa8.5□□□□□ -1.05
SYNE2-215ENST00000554997 A0A075B6Q4 140 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 A0A096LNT2 108 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 IGHV4-61A0A0C4DH41 118 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 F5H0A9 414 aaPredicted RBP8.49□□□□□ -1.05
SYNE2-215ENST00000554997 K7N7A8 449 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 GPR37O15354 613 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 ADAM20O43506 726 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 NDUFB3O43676 98 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 ZNF737O75373 536 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 GLAP06280 429 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 HEXAP06865 529 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 FUT3P21217 361 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 PITPNBP48739 271 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 CEBPDP49716 269 aaPredicted RBP8.49□□□□□ -1.05
SYNE2-215ENST00000554997 NPY4RP50391 375 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 EFNB2P52799 333 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 SNU13P55769 128 aaKnown RBP8.49□□□□□ -1.05
SYNE2-215ENST00000554997 IL13RA1P78552 427 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 PLA2G7Q13093 441 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 IKZF1Q13422 519 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 PDCD1Q15116 288 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 C11orf91Q3C1V1 193 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 NLRC3Q7RTR2 1065 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 ZNRF1Q8ND25 227 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 OR56B1Q8NGI3 324 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 OR5D13Q8NGL4 314 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 OR5H6Q8NGV6 325 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 LGALS14Q8TCE9 139 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 NEIL1Q96FI4 390 aaPredicted RBP8.49□□□□□ -1.05
SYNE2-215ENST00000554997 SNX22Q96L94 193 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 SHARPINQ9H0F6 387 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 ABCG5Q9H222 651 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 KCNK15Q9H427 330 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 SPACA1Q9HBV2 294 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 COMMD3Q9UBI1 195 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 CCDC168Q8NDH2 2452 aa8.49□□□□□ -1.05
SYNE2-215ENST00000554997 TRAV24A0A0B4J272 114 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 TMEM82A0PJX8 343 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 NKX6-3A6NJ46 265 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 FOXI3A8MTJ6 420 aaPredicted RBP8.48□□□□□ -1.05
SYNE2-215ENST00000554997 RNF223E7ERA6 249 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 RAB27BO00194 218 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 SIRPB1O00241 398 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 SLC33A1O00400 549 aaPredicted RBP8.48□□□□□ -1.05
SYNE2-215ENST00000554997 DVL1O14640 695 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 SOCS1O15524 211 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 PSPNO60542 156 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 OR7C1O76099 320 aaPredicted RBP8.48□□□□□ -1.05
SYNE2-215ENST00000554997 IGHV2-5P01817 119 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 TFF1P04155 84 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 TK1P04183 234 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 ZNF44P15621 663 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 RPS2P15880 293 aaKnown RBP8.48□□□□□ -1.05
SYNE2-215ENST00000554997 GABRR1P24046 479 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 BLVRBP30043 206 aaPredicted RBP8.48□□□□□ -1.05
SYNE2-215ENST00000554997 TMEM50BP56557 158 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 LRRC10Q5BKY1 277 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 SIGIRRQ6IA17 410 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 RAB12Q6IQ22 244 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 C17orf107Q6ZR85 190 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 Q6ZTK2 550 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 BIVMQ86UB2 503 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 FAM216BQ8N7L0 139 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 SAMD12Q8N8I0 201 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 SUMF2Q8NBJ7 301 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 OR8B3Q8NGG8 313 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 PPP1R35Q8TAP8 253 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 RAB40AQ8WXH6 277 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 RAB39BQ96DA2 213 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 S100A16Q96FQ6 103 aaKnown RBP8.48□□□□□ -1.05
SYNE2-215ENST00000554997 C1orf159Q96HA4 380 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 NEDD4LQ96PU5 975 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 OR8B2Q96RD0 313 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 NICN1Q9BSH3 213 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 DCUN1D5Q9BTE7 237 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 NXF2Q9GZY0 626 aaKnown RBP8.48□□□□□ -1.05
SYNE2-215ENST00000554997 ATG5Q9H1Y0 275 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 MMP27Q9H306 513 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 NARFLQ9H6Q4 476 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 RCC2Q9P258 522 aaKnown RBP8.48□□□□□ -1.05
SYNE2-215ENST00000554997 CTSZQ9UBR2 303 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 HSF4Q9ULV5 492 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 PEX16Q9Y5Y5 336 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 A3GALT2U3KPV4 340 aa8.48□□□□□ -1.05
SYNE2-215ENST00000554997 A0A0A6YYD4 124 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 A0A0A6YYH2 397 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 A0A1B0GW55 424 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 A6NJ64 397 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms