RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 SERPINE3A8MV23 424 aa13.32□□□□□ -0.28
CACNB3-222ENST00000552465 CCL24O00175 119 aa13.32□□□□□ -0.28
CACNB3-222ENST00000552465 NPBWR2P48146 333 aa13.32□□□□□ -0.28
CACNB3-222ENST00000552465 RAB25P57735 213 aa13.32□□□□□ -0.28
CACNB3-222ENST00000552465 ACTR3P61158 418 aa13.32□□□□□ -0.28
CACNB3-222ENST00000552465 KPNB1Q14974 876 aaKnown RBP13.32□□□□□ -0.28
CACNB3-222ENST00000552465 ZNF146Q15072 292 aa13.32□□□□□ -0.28
CACNB3-222ENST00000552465 PLEKHG7Q6ZR37 379 aa13.32□□□□□ -0.28
CACNB3-222ENST00000552465 DHFR2Q86XF0 187 aa13.32□□□□□ -0.28
CACNB3-222ENST00000552465 Q8IYB0 196 aa13.32□□□□□ -0.28
CACNB3-222ENST00000552465 FAM58AQ8N1B3 248 aa13.32□□□□□ -0.28
CACNB3-222ENST00000552465 TEX12Q9BXU0 123 aa13.32□□□□□ -0.28
CACNB3-222ENST00000552465 LINC00527Q9UJ94 153 aa13.32□□□□□ -0.28
CACNB3-222ENST00000552465 RYR2Q92736 4967 aa13.32□□□□□ -0.28
CACNB3-222ENST00000552465 TENM2Q9NT68 2774 aa13.32□□□□□ -0.28
CACNB3-222ENST00000552465 A0A087X0M5 115 aa13.31□□□□□ -0.28
CACNB3-222ENST00000552465 A0A1B0GX30 115 aa13.31□□□□□ -0.28
CACNB3-222ENST00000552465 ENTPD6O75354 484 aa13.31□□□□□ -0.28
CACNB3-222ENST00000552465 CHATP28329 748 aa13.31□□□□□ -0.28
CACNB3-222ENST00000552465 ECI1P42126 302 aa13.31□□□□□ -0.28
CACNB3-222ENST00000552465 CDC42P60953 191 aa13.31□□□□□ -0.28
CACNB3-222ENST00000552465 CXCR4P61073 352 aa13.31□□□□□ -0.28
CACNB3-222ENST00000552465 SLC35B1P78383 322 aa13.31□□□□□ -0.28
CACNB3-222ENST00000552465 UTF1Q5T230 341 aa13.31□□□□□ -0.28
CACNB3-222ENST00000552465 C9orf66Q5T8R8 295 aa13.31□□□□□ -0.28
CACNB3-222ENST00000552465 C5orf56Q8N8D9 126 aa13.31□□□□□ -0.28
CACNB3-222ENST00000552465 CNN2Q99439 309 aaKnown RBP13.31□□□□□ -0.28
CACNB3-222ENST00000552465 PLEKHA1Q9HB21 404 aa13.31□□□□□ -0.28
CACNB3-222ENST00000552465 SLC25A19Q9HC21 320 aa13.31□□□□□ -0.28
CACNB3-222ENST00000552465 TVP23BQ9NYZ1 205 aa13.31□□□□□ -0.28
CACNB3-222ENST00000552465 TRBV2A0A0J9YWF9 115 aa13.3□□□□□ -0.28
CACNB3-222ENST00000552465 FUOMA2VDF0 154 aa13.3□□□□□ -0.28
CACNB3-222ENST00000552465 SIRPB1O00241 398 aa13.3□□□□□ -0.28
CACNB3-222ENST00000552465 CST1P01037 141 aa13.3□□□□□ -0.28
CACNB3-222ENST00000552465 CALCBP10092 127 aa13.3□□□□□ -0.28
CACNB3-222ENST00000552465 RAP2AP10114 183 aa13.3□□□□□ -0.28
CACNB3-222ENST00000552465 BCL3P20749 454 aa13.3□□□□□ -0.28
CACNB3-222ENST00000552465 GLIPR1P48060 266 aa13.3□□□□□ -0.28
CACNB3-222ENST00000552465 SNU13P55769 128 aaKnown RBP13.3□□□□□ -0.28
CACNB3-222ENST00000552465 MS4A2Q01362 244 aa13.3□□□□□ -0.28
CACNB3-222ENST00000552465 RBM39Q14498 530 aaKnown RBP13.3□□□□□ -0.28
CACNB3-222ENST00000552465 SPIN3Q5JUX0 258 aa13.3□□□□□ -0.28
CACNB3-222ENST00000552465 OR5M8Q8NGP6 311 aa13.3□□□□□ -0.28
CACNB3-222ENST00000552465 BORCS8Q96FH0 119 aa13.3□□□□□ -0.28
CACNB3-222ENST00000552465 CHST5Q9GZS9 411 aa13.3□□□□□ -0.28
CACNB3-222ENST00000552465 ZNF556Q9HAH1 456 aa13.3□□□□□ -0.28
CACNB3-222ENST00000552465 MRM2Q9UI43 246 aaKnown RBP13.3□□□□□ -0.28
CACNB3-222ENST00000552465 SCOCQ9UIL1 159 aa13.3□□□□□ -0.28
CACNB3-222ENST00000552465 H3BSH0 61 aa13.29□□□□□ -0.28
CACNB3-222ENST00000552465 SYT7O43581 403 aa13.29□□□□□ -0.28
CACNB3-222ENST00000552465 GATBO75879 557 aaKnown RBP13.29□□□□□ -0.28
CACNB3-222ENST00000552465 IGHG2P01859 326 aa13.29□□□□□ -0.28
CACNB3-222ENST00000552465 PRKACAP17612 351 aa13.29□□□□□ -0.28
CACNB3-222ENST00000552465 AESQ08117 197 aa13.29□□□□□ -0.28
CACNB3-222ENST00000552465 TRIM25Q14258 630 aaKnown RBP13.29□□□□□ -0.28
CACNB3-222ENST00000552465 ODF4Q2M2E3 257 aa13.29□□□□□ -0.28
CACNB3-222ENST00000552465 SLC35E3Q7Z769 313 aa13.29□□□□□ -0.28
CACNB3-222ENST00000552465 SLC35F2Q8IXU6 374 aa13.29□□□□□ -0.28
CACNB3-222ENST00000552465 STPG2Q8N412 459 aa13.29□□□□□ -0.28
CACNB3-222ENST00000552465 Q8NFD4 153 aa13.29□□□□□ -0.28
CACNB3-222ENST00000552465 OR4D6Q8NGJ1 314 aa13.29□□□□□ -0.28
CACNB3-222ENST00000552465 OR56B4Q8NH76 319 aa13.29□□□□□ -0.28
CACNB3-222ENST00000552465 RPEQ96AT9 228 aa13.29□□□□□ -0.28
CACNB3-222ENST00000552465 MNTQ99583 582 aa13.29□□□□□ -0.28
CACNB3-222ENST00000552465 DCLRE1BQ9H816 532 aa13.29□□□□□ -0.28
CACNB3-222ENST00000552465 PCDHB16Q9NRJ7 776 aa13.29□□□□□ -0.28
CACNB3-222ENST00000552465 GAR1Q9NY12 217 aaKnown RBP13.29□□□□□ -0.28
CACNB3-222ENST00000552465 BIRC6Q9NR09 4857 aa13.29□□□□□ -0.28
CACNB3-222ENST00000552465 SH2D1BO14796 132 aa13.28□□□□□ -0.28
CACNB3-222ENST00000552465 FGF16O43320 207 aa13.28□□□□□ -0.28
CACNB3-222ENST00000552465 SNX3O60493 162 aa13.28□□□□□ -0.28
CACNB3-222ENST00000552465 RPP14O95059 124 aaKnown RBP13.28□□□□□ -0.28
CACNB3-222ENST00000552465 OR2H2O95918 312 aa13.28□□□□□ -0.28
CACNB3-222ENST00000552465 CYB5AP00167 134 aa13.28□□□□□ -0.28
CACNB3-222ENST00000552465 SERPINA3P01011 423 aa13.28□□□□□ -0.28
CACNB3-222ENST00000552465 TMEM11P17152 192 aa13.28□□□□□ -0.28
CACNB3-222ENST00000552465 PRKACGP22612 351 aa13.28□□□□□ -0.28
CACNB3-222ENST00000552465 PTGFRP43088 359 aa13.28□□□□□ -0.28
CACNB3-222ENST00000552465 ATP1B3P54709 279 aa13.28□□□□□ -0.28
CACNB3-222ENST00000552465 HES1Q14469 280 aa13.28□□□□□ -0.28
CACNB3-222ENST00000552465 KIR2DS1Q14954 304 aa13.28□□□□□ -0.28
CACNB3-222ENST00000552465 C17orf58Q2M2W7 97 aa13.28□□□□□ -0.28
CACNB3-222ENST00000552465 TEX38Q6PEX7 206 aa13.28□□□□□ -0.28
CACNB3-222ENST00000552465 FOXRED2Q8IWF2 684 aa13.28□□□□□ -0.28
CACNB3-222ENST00000552465 HS3ST5Q8IZT8 346 aa13.28□□□□□ -0.28
CACNB3-222ENST00000552465 DRAM1Q8N682 238 aa13.28□□□□□ -0.28
CACNB3-222ENST00000552465 OR8U1Q8NH10 309 aa13.28□□□□□ -0.28
CACNB3-222ENST00000552465 OR9G1Q8NH87 305 aa13.28□□□□□ -0.28
CACNB3-222ENST00000552465 TOMM40LQ969M1 308 aa13.28□□□□□ -0.28
CACNB3-222ENST00000552465 FAM107BQ9H098 131 aa13.28□□□□□ -0.28
CACNB3-222ENST00000552465 HMG20AQ9NP66 347 aa13.28□□□□□ -0.28
CACNB3-222ENST00000552465 EXOSC4Q9NPD3 245 aaKnown RBP13.28□□□□□ -0.28
CACNB3-222ENST00000552465 LCE6AA0A183 80 aa13.27□□□□□ -0.29
CACNB3-222ENST00000552465 ODAMA1E959 279 aa13.27□□□□□ -0.29
CACNB3-222ENST00000552465 LINC01548A6NM66 108 aa13.27□□□□□ -0.29
CACNB3-222ENST00000552465 SEC14L6B5MCN3 397 aa13.27□□□□□ -0.29
CACNB3-222ENST00000552465 ZNF670-ZNF695F2Z2N8 137 aa13.27□□□□□ -0.29
CACNB3-222ENST00000552465 GNGT2O14610 69 aa13.27□□□□□ -0.29
CACNB3-222ENST00000552465 RPLP1P05386 114 aaKnown RBP13.27□□□□□ -0.29
CACNB3-222ENST00000552465 ANXA8P13928 327 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms