RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 VAX2Q9UIW0 290 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 PRG3Q9Y2Y8 225 aaPredicted RBP3.05□□□□□ -1.92
SCAF11-210ENST00000547654 TPRP12270 2363 aaKnown RBP3.05□□□□□ -1.92
SCAF11-210ENST00000547654 FLNBO75369 2602 aaKnown RBP3.05□□□□□ -1.92
SCAF11-210ENST00000547654 MAP1BP46821 2468 aaKnown RBP3.04□□□□□ -1.92
SCAF11-210ENST00000547654 ADGRB1O14514 1584 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 NFAT5O94916 1531 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 ZNF318Q5VUA4 2279 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 VPS8Q8N3P4 1428 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 YTHDC2Q9H6S0 1430 aaKnown RBP3.04□□□□□ -1.92
SCAF11-210ENST00000547654 IGHV3-74A0A0B4J1X5 117 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 TRAV8-6A0A0B4J262 113 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 A0A0J9YXV3 536 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 EPOPA6NHQ4 379 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 ZNF233A6NK53 670 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 KRTAP4-16G5E9R7 235 aaPredicted RBP3.04□□□□□ -1.92
SCAF11-210ENST00000547654 H0Y9J4 135 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 SLC31A1O15431 190 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 HPGDSO60760 199 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 SRSF10O75494 262 aaKnown RBP3.04□□□□□ -1.92
SCAF11-210ENST00000547654 CRISP2P16562 243 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 PSMB9P28065 219 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 CD70P32970 193 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 OR10A3P58181 314 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 INCA1Q0VD86 236 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 GNA13Q14344 377 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 DNAL1Q4LDG9 190 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 ORMDL2Q53FV1 153 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 PDZD11Q5EBL8 140 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 COQ5Q5HYK3 327 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 SAPCD1Q5SSQ6 148 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 FAM45BPQ6NSW5 357 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 DRAM2Q6UX65 266 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 ACP7Q6ZNF0 438 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 LGI3Q8N145 548 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 CD177Q8N6Q3 437 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 OR4K2Q8NGD2 314 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 FAM45AQ8TCE6 357 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 S100PBPQ96BU1 408 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 TMEM56Q96MV1 263 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 API5Q9BZZ5 524 aaKnown RBP3.04□□□□□ -1.92
SCAF11-210ENST00000547654 LHX5Q9H2C1 402 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 FGFR1OP2Q9NVK5 253 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 SLX4Q8IY92 1834 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 ASPMQ8IZT6 3477 aa3.04□□□□□ -1.92
SCAF11-210ENST00000547654 GCN1Q92616 2671 aaKnown RBP3.04□□□□□ -1.92
SCAF11-210ENST00000547654 FAM208BQ5VWN6 2430 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 PALLDQ8WX93 1383 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 VPS13AQ96RL7 3174 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 TRAV19A0A0A6YYK7 116 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 J3QLI3 93 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 ZW10O43264 779 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 SSNA1O43805 119 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 ENTPD6O75354 484 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 RP2O75695 350 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 SLC25A27O95847 323 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 INSP01308 110 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 HLA-AP01891 365 aaKnown RBP3.03□□□□□ -1.92
SCAF11-210ENST00000547654 RLN2P04090 185 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 ZNF35P13682 527 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 HIST1H1CP16403 213 aaKnown RBP3.03□□□□□ -1.92
SCAF11-210ENST00000547654 CXCR1P25024 350 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 PAX6P26367 422 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 PSMB5P28074 263 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 SSTR5P35346 364 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 APLNRP35414 380 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 ACTR1BP42025 376 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 CDKN2CP42773 168 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 UBE2AP49459 152 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 DLX6P56179 175 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 NUP107P57740 925 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 ARG2P78540 354 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 STX5Q13190 355 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 ERCC8Q13216 396 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 NAB1Q13506 487 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 GOLGA7BQ2TAP0 167 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 LPCAT4Q643R3 524 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 MED27Q6P2C8 311 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 DNAJC24Q6P3W2 148 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 GAPTQ8N292 157 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 ZNF461Q8TAF7 563 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 RXFP4Q8TDU9 374 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 RNF133Q8WVZ7 376 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 TM4SF18Q96CE8 201 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 LRRC58Q96CX6 371 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 DDIT4LQ96D03 193 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 YIPF6Q96EC8 236 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 RILPQ96NA2 401 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 OR2M2Q96R28 347 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 PLEKHF1Q96S99 279 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 DHX35Q9H5Z1 703 aaKnown RBP3.03□□□□□ -1.92
SCAF11-210ENST00000547654 DIABLOQ9NR28 239 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 COMMD9Q9P000 198 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 PSG8Q9UQ74 426 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 SIGLEC7Q9Y286 467 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 COL4A5P29400 1685 aa3.03□□□□□ -1.92
SCAF11-210ENST00000547654 DENND4AQ7Z401 1863 aa3.03□□□□□ -1.93
SCAF11-210ENST00000547654 ANKRD50Q9ULJ7 1429 aa3.02□□□□□ -1.93
SCAF11-210ENST00000547654 ACACBO00763 2458 aa3.02□□□□□ -1.93
SCAF11-210ENST00000547654 RALGAPA1Q6GYQ0 2036 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms