RNA–Protein interactions for RNA: ENST00000546992.5

LETMD1-205, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-205ENST00000546992 RAB6AP20340 208 aa13.58□□□□□ -0.24
LETMD1-205ENST00000546992 GABRR1P24046 479 aa13.58□□□□□ -0.24
LETMD1-205ENST00000546992 GABRA2P47869 451 aa13.58□□□□□ -0.24
LETMD1-205ENST00000546992 CAPZA1P52907 286 aa13.58□□□□□ -0.24
LETMD1-205ENST00000546992 IKZF1Q13422 519 aa13.58□□□□□ -0.24
LETMD1-205ENST00000546992 MOGAT2Q3SYC2 334 aa13.58□□□□□ -0.24
LETMD1-205ENST00000546992 ZNF841Q6ZN19 808 aa13.58□□□□□ -0.24
LETMD1-205ENST00000546992 MUC20Q8N307 709 aaPredicted RBP13.58□□□□□ -0.24
LETMD1-205ENST00000546992 FAM89BQ8N5H3 189 aa13.58□□□□□ -0.24
LETMD1-205ENST00000546992 ZNRF1Q8ND25 227 aa13.58□□□□□ -0.24
LETMD1-205ENST00000546992 KCTD12Q96CX2 325 aaKnown RBP13.58□□□□□ -0.24
LETMD1-205ENST00000546992 MRPS24Q96EL2 167 aaKnown RBP13.58□□□□□ -0.24
LETMD1-205ENST00000546992 SEBOXQ9HB31 216 aaPredicted RBP13.58□□□□□ -0.24
LETMD1-205ENST00000546992 PATZ1Q9HBE1 687 aaKnown RBP13.58□□□□□ -0.24
LETMD1-205ENST00000546992 KAAG1Q9UBP8 84 aa13.58□□□□□ -0.24
LETMD1-205ENST00000546992 SPATA2Q9UM82 520 aa13.58□□□□□ -0.24
LETMD1-205ENST00000546992 RNF223E7ERA6 249 aa13.57□□□□□ -0.24
LETMD1-205ENST00000546992 SLC33A1O00400 549 aaPredicted RBP13.57□□□□□ -0.24
LETMD1-205ENST00000546992 SIGLEC5O15389 551 aa13.57□□□□□ -0.24
LETMD1-205ENST00000546992 SOCS1O15524 211 aa13.57□□□□□ -0.24
LETMD1-205ENST00000546992 TMEM127O75204 238 aa13.57□□□□□ -0.24
LETMD1-205ENST00000546992 WNT2P09544 360 aa13.57□□□□□ -0.24
LETMD1-205ENST00000546992 SCAND1P57086 179 aa13.57□□□□□ -0.24
LETMD1-205ENST00000546992 FIP1L1Q6UN15 594 aaKnown RBP13.57□□□□□ -0.24
LETMD1-205ENST00000546992 C17orf107Q6ZR85 190 aa13.57□□□□□ -0.24
LETMD1-205ENST00000546992 CIARTQ8N365 385 aaPredicted RBP13.57□□□□□ -0.24
LETMD1-205ENST00000546992 SPICQ8N5J4 248 aa13.57□□□□□ -0.24
LETMD1-205ENST00000546992 MAPK1IP1LQ8NDC0 245 aa13.57□□□□□ -0.24
LETMD1-205ENST00000546992 NXF2Q9GZY0 626 aaKnown RBP13.57□□□□□ -0.24
LETMD1-205ENST00000546992 DNTTIP1Q9H147 329 aa13.57□□□□□ -0.24
LETMD1-205ENST00000546992 MIXL1Q9H2W2 232 aa13.57□□□□□ -0.24
LETMD1-205ENST00000546992 ZNF665Q9H7R5 613 aa13.57□□□□□ -0.24
LETMD1-205ENST00000546992 RHBDL2Q9NX52 303 aa13.57□□□□□ -0.24
LETMD1-205ENST00000546992 RCC2Q9P258 522 aaKnown RBP13.57□□□□□ -0.24
LETMD1-205ENST00000546992 RAB22AQ9UL26 194 aa13.57□□□□□ -0.24
LETMD1-205ENST00000546992 ETV7Q9Y603 341 aa13.57□□□□□ -0.24
LETMD1-205ENST00000546992 RAB27BO00194 218 aa13.56□□□□□ -0.24
LETMD1-205ENST00000546992 TMPRSS2O15393 492 aa13.56□□□□□ -0.24
LETMD1-205ENST00000546992 OR7C1O76099 320 aaPredicted RBP13.56□□□□□ -0.24
LETMD1-205ENST00000546992 EIF4EP06730 217 aaKnown RBP13.56□□□□□ -0.24
LETMD1-205ENST00000546992 RPS2P15880 293 aaKnown RBP13.56□□□□□ -0.24
LETMD1-205ENST00000546992 LMO1P25800 156 aa13.56□□□□□ -0.24
LETMD1-205ENST00000546992 OR3A1P47881 315 aa13.56□□□□□ -0.24
LETMD1-205ENST00000546992 SCN1BQ07699 218 aa13.56□□□□□ -0.24
LETMD1-205ENST00000546992 DYNC1I2Q13409 638 aaKnown RBP13.56□□□□□ -0.24
LETMD1-205ENST00000546992 MPV17LQ2QL34 196 aa13.56□□□□□ -0.24
LETMD1-205ENST00000546992 CNPY1Q3B7I2 92 aa13.56□□□□□ -0.24
LETMD1-205ENST00000546992 OR4S1Q8NGB4 309 aa13.56□□□□□ -0.24
LETMD1-205ENST00000546992 PTX4Q96A99 478 aa13.56□□□□□ -0.24
LETMD1-205ENST00000546992 REG4Q9BYZ8 158 aa13.56□□□□□ -0.24
LETMD1-205ENST00000546992 CHST6Q9GZX3 395 aa13.56□□□□□ -0.24
LETMD1-205ENST00000546992 SHARPINQ9H0F6 387 aa13.56□□□□□ -0.24
LETMD1-205ENST00000546992 IFT22Q9H7X7 185 aa13.56□□□□□ -0.24
LETMD1-205ENST00000546992 PCDHB16Q9NRJ7 776 aa13.56□□□□□ -0.24
LETMD1-205ENST00000546992 COMMD3Q9UBI1 195 aa13.56□□□□□ -0.24
LETMD1-205ENST00000546992 CREBBPQ92793 2442 aa13.56□□□□□ -0.24
LETMD1-205ENST00000546992 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.56□□□□□ -0.242e-7■■□□□ 11.4
LETMD1-205ENST00000546992 KIAA2026Q5HYC2 2103 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 FAM90A10PA6NDY2 464 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 FAM90A18PA6NE21 464 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 FAM90A16PA6NEW6 464 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 FAM90A20PA6NIJ5 464 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 NKX6-3A6NJ46 265 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 FAM90A8PA6NJQ4 464 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 FAM90A7PA6NKC0 464 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 FAM90A22PA8MWA6 464 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 KIAA1324LA8MWY0 1029 aaPredicted RBP13.55□□□□□ -0.24
LETMD1-205ENST00000546992 FAM90A12PA8MX19 464 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 FAM90A5PA8MXJ8 464 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 FAM90A23PA8MXZ1 464 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 FAM157AC9JC47 383 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 HSPB6O14558 160 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 CTDSP2O14595 271 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 DVL1O14640 695 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 SH2D1BO14796 132 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 NDUFA2O43678 99 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 HPGDSO60760 199 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 CHRM2P08172 466 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 FAM90A15PP0C7V4 464 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 FAM90A13PP0C7W8 464 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 FAM90A14PP0C7W9 464 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 FAM90A24PP0C7X0 464 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 ZNF44P15621 663 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 USF1P22415 310 aaPredicted RBP13.55□□□□□ -0.24
LETMD1-205ENST00000546992 CPT2P23786 658 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 CHATP28329 748 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 SOX6P35712 828 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 VEGFCP49767 419 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 TMEM50BP56557 158 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 IL13RA1P78552 427 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 KCNJ8Q15842 424 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 PLAC9Q5JTB6 97 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 BRICD5Q6PL45 260 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 LINC00596Q86U02 117 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 CMTM4Q8IZR5 234 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 ZNF561Q8N587 486 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 SAMD12Q8N8I0 201 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 ACOT12Q8WYK0 555 aa13.55□□□□□ -0.24
LETMD1-205ENST00000546992 NEIL1Q96FI4 390 aaPredicted RBP13.55□□□□□ -0.24
LETMD1-205ENST00000546992 MRI1Q9BV20 369 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms