RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 LINC01548A6NM66 108 aa11.52□□□□□ -0.57
RTN3-214ENST00000545432 HMGN1P05114 100 aa11.52□□□□□ -0.57
RTN3-214ENST00000545432 ELANEP08246 267 aa11.52□□□□□ -0.57
RTN3-214ENST00000545432 GABRR1P24046 479 aa11.52□□□□□ -0.57
RTN3-214ENST00000545432 FUT6P51993 359 aa11.52□□□□□ -0.57
RTN3-214ENST00000545432 FOXE3Q13461 319 aa11.52□□□□□ -0.57
RTN3-214ENST00000545432 GINS1Q14691 196 aa11.52□□□□□ -0.57
RTN3-214ENST00000545432 OR2T5Q6IEZ7 315 aa11.52□□□□□ -0.57
RTN3-214ENST00000545432 SLC35E3Q7Z769 313 aa11.52□□□□□ -0.57
RTN3-214ENST00000545432 BBS1Q8NFJ9 593 aa11.52□□□□□ -0.57
RTN3-214ENST00000545432 OR2T29Q8NH02 315 aa11.52□□□□□ -0.57
RTN3-214ENST00000545432 SLAMF9Q96A28 289 aa11.52□□□□□ -0.57
RTN3-214ENST00000545432 MAGIXQ9H6Y5 334 aa11.52□□□□□ -0.57
RTN3-214ENST00000545432 LINC00527Q9UJ94 153 aa11.52□□□□□ -0.57
RTN3-214ENST00000545432 SLC7A11Q9UPY5 501 aa11.52□□□□□ -0.57
RTN3-214ENST00000545432 TMEM14AQ9Y6G1 99 aa11.52□□□□□ -0.57
RTN3-214ENST00000545432 U3KQV3 271 aa11.52□□□□□ -0.57
RTN3-214ENST00000545432 TRGV10A0A0A0MS01 117 aa11.51□□□□□ -0.57
RTN3-214ENST00000545432 TRBV2A0A0J9YWF9 115 aa11.51□□□□□ -0.57
RTN3-214ENST00000545432 A0A1W2PPI3 338 aa11.51□□□□□ -0.57
RTN3-214ENST00000545432 TCRBV5S2A0A599 114 aa11.51□□□□□ -0.57
RTN3-214ENST00000545432 TOR1AO14656 332 aa11.51□□□□□ -0.57
RTN3-214ENST00000545432 ENTPD6O75354 484 aa11.51□□□□□ -0.57
RTN3-214ENST00000545432 CSN2P05814 226 aa11.51□□□□□ -0.57
RTN3-214ENST00000545432 CFHR3Q02985 330 aa11.51□□□□□ -0.57
RTN3-214ENST00000545432 C17orf58Q2M2W7 97 aa11.51□□□□□ -0.57
RTN3-214ENST00000545432 SPIN3Q5JUX0 258 aa11.51□□□□□ -0.57
RTN3-214ENST00000545432 LCNL1Q6ZST4 164 aa11.51□□□□□ -0.57
RTN3-214ENST00000545432 SLC25A26Q70HW3 274 aa11.51□□□□□ -0.57
RTN3-214ENST00000545432 HDXQ7Z353 690 aa11.51□□□□□ -0.57
RTN3-214ENST00000545432 FOXRED2Q8IWF2 684 aa11.51□□□□□ -0.57
RTN3-214ENST00000545432 PGAM4Q8N0Y7 254 aa11.51□□□□□ -0.57
RTN3-214ENST00000545432 OR10G2Q8NGC3 310 aa11.51□□□□□ -0.57
RTN3-214ENST00000545432 EMG1Q92979 244 aaKnown RBP11.51□□□□□ -0.57
RTN3-214ENST00000545432 FEVQ99581 238 aa11.51□□□□□ -0.57
RTN3-214ENST00000545432 LINC00574Q9H8X3 128 aa11.51□□□□□ -0.57
RTN3-214ENST00000545432 PALMDQ9NP74 551 aa11.51□□□□□ -0.57
RTN3-214ENST00000545432 ACTR3BQ9P1U1 418 aa11.51□□□□□ -0.57
RTN3-214ENST00000545432 GLS2Q9UI32 602 aa11.51□□□□□ -0.57
RTN3-214ENST00000545432 R4GMQ9 66 aa11.51□□□□□ -0.57
RTN3-214ENST00000545432 PLECQ15149 4684 aaKnown RBP11.5□□□□□ -0.57
RTN3-214ENST00000545432 FAM230AA0A1W2PPH8 454 aa11.5□□□□□ -0.57
RTN3-214ENST00000545432 FUOMA2VDF0 154 aa11.5□□□□□ -0.57
RTN3-214ENST00000545432 CCDC182A6NF36 153 aa11.5□□□□□ -0.57
RTN3-214ENST00000545432 A6NIN4 97 aa11.5□□□□□ -0.57
RTN3-214ENST00000545432 LOC110117498-PIK3R3F6TDL0 507 aa11.5□□□□□ -0.57
RTN3-214ENST00000545432 H3BN98 237 aa11.5□□□□□ -0.57
RTN3-214ENST00000545432 AP4M1O00189 453 aa11.5□□□□□ -0.57
RTN3-214ENST00000545432 GLIPR1P48060 266 aa11.5□□□□□ -0.57
RTN3-214ENST00000545432 NPBWR2P48146 333 aa11.5□□□□□ -0.57
RTN3-214ENST00000545432 VEGFCP49767 419 aa11.5□□□□□ -0.57
RTN3-214ENST00000545432 DEFB136Q30KP8 78 aa11.5□□□□□ -0.57
RTN3-214ENST00000545432 ZNF260Q3ZCT1 412 aa11.5□□□□□ -0.57
RTN3-214ENST00000545432 TRAPPC6BQ86SZ2 158 aa11.5□□□□□ -0.57
RTN3-214ENST00000545432 FAM58AQ8N1B3 248 aa11.5□□□□□ -0.57
RTN3-214ENST00000545432 FAM71E2Q8N5Q1 922 aa11.5□□□□□ -0.57
RTN3-214ENST00000545432 DNAAF1Q8NEP3 725 aa11.5□□□□□ -0.57
RTN3-214ENST00000545432 OR9G1Q8NH87 305 aa11.5□□□□□ -0.57
RTN3-214ENST00000545432 TRMT10AQ8TBZ6 339 aaKnown RBP11.5□□□□□ -0.57
RTN3-214ENST00000545432 MYOZ3Q8TDC0 251 aa11.5□□□□□ -0.57
RTN3-214ENST00000545432 C4orf3Q8WVX3 66 aa11.5□□□□□ -0.57
RTN3-214ENST00000545432 TM2D3Q9BRN9 247 aa11.5□□□□□ -0.57
RTN3-214ENST00000545432 GON7Q9BXV9 100 aa11.5□□□□□ -0.57
RTN3-214ENST00000545432 REEP1Q9H902 201 aa11.5□□□□□ -0.57
RTN3-214ENST00000545432 ZNF580Q9UK33 172 aa11.5□□□□□ -0.57
RTN3-214ENST00000545432 OR52A1Q9UKL2 312 aa11.5□□□□□ -0.57
RTN3-214ENST00000545432 SAMHD1Q9Y3Z3 626 aaKnown RBP11.5□□□□□ -0.57
RTN3-214ENST00000545432 IGHG4P01861 327 aa11.49□□□□□ -0.57
RTN3-214ENST00000545432 TMEM11P17152 192 aa11.49□□□□□ -0.57
RTN3-214ENST00000545432 DUSP1P28562 367 aa11.49□□□□□ -0.57
RTN3-214ENST00000545432 RAB25P57735 213 aa11.49□□□□□ -0.57
RTN3-214ENST00000545432 KPNB1Q14974 876 aaKnown RBP11.49□□□□□ -0.57
RTN3-214ENST00000545432 OR8H3Q8N146 312 aa11.49□□□□□ -0.57
RTN3-214ENST00000545432 Q8N6K4 173 aa11.49□□□□□ -0.57
RTN3-214ENST00000545432 OR56B4Q8NH76 319 aa11.49□□□□□ -0.57
RTN3-214ENST00000545432 RPEQ96AT9 228 aa11.49□□□□□ -0.57
RTN3-214ENST00000545432 KIRREL1Q96J84 757 aa11.49□□□□□ -0.57
RTN3-214ENST00000545432 CHST5Q9GZS9 411 aa11.49□□□□□ -0.57
RTN3-214ENST00000545432 COMMD4Q9H0A8 199 aa11.49□□□□□ -0.57
RTN3-214ENST00000545432 ABCG5Q9H222 651 aa11.49□□□□□ -0.57
RTN3-214ENST00000545432 NCOR1P1Q9H4R4 102 aa11.49□□□□□ -0.57
RTN3-214ENST00000545432 ZMAT4Q9H898 229 aa11.49□□□□□ -0.57
RTN3-214ENST00000545432 HMG20AQ9NP66 347 aa11.49□□□□□ -0.57
RTN3-214ENST00000545432 RBFOX1Q9NWB1 397 aaKnown RBP11.49□□□□□ -0.57
RTN3-214ENST00000545432 SNX5Q9Y5X3 404 aa11.49□□□□□ -0.57
RTN3-214ENST00000545432 ODAMA1E959 279 aa11.48□□□□□ -0.57
RTN3-214ENST00000545432 FAM172BPA6NC97 362 aa11.48□□□□□ -0.57
RTN3-214ENST00000545432 ZNF729A6NN14 1252 aaPredicted RBP11.48□□□□□ -0.57
RTN3-214ENST00000545432 J3QR06 171 aa11.48□□□□□ -0.57
RTN3-214ENST00000545432 OR2H2O95918 312 aa11.48□□□□□ -0.57
RTN3-214ENST00000545432 FRMD6-AS1P0C7T7 363 aa11.48□□□□□ -0.57
RTN3-214ENST00000545432 ATP6V1B2P21281 511 aa11.48□□□□□ -0.57
RTN3-214ENST00000545432 GPR12P47775 334 aa11.48□□□□□ -0.57
RTN3-214ENST00000545432 RAB7AP51149 207 aa11.48□□□□□ -0.57
RTN3-214ENST00000545432 RUNX1Q01196 453 aa11.48□□□□□ -0.57
RTN3-214ENST00000545432 AESQ08117 197 aa11.48□□□□□ -0.57
RTN3-214ENST00000545432 GPR50Q13585 617 aa11.48□□□□□ -0.57
RTN3-214ENST00000545432 APOFQ13790 326 aa11.48□□□□□ -0.57
RTN3-214ENST00000545432 KIAA0141Q14154 515 aaPredicted RBP11.48□□□□□ -0.57
RTN3-214ENST00000545432 DIAPH2-AS1Q14236 149 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms