RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 P2RX3P56373 397 aa16.96■□□□□ 0.31
CHFR-217ENST00000540537 KLHL22Q53GT1 634 aa16.96■□□□□ 0.31
CHFR-217ENST00000540537 DYNAPQ8N1N2 210 aa16.96■□□□□ 0.31
CHFR-217ENST00000540537 DTX3Q8N9I9 347 aa16.96■□□□□ 0.31
CHFR-217ENST00000540537 OR52I1Q8NGK6 324 aa16.96■□□□□ 0.31
CHFR-217ENST00000540537 APH1BQ8WW43 257 aa16.96■□□□□ 0.31
CHFR-217ENST00000540537 CDCA4Q9BXL8 241 aa16.96■□□□□ 0.31
CHFR-217ENST00000540537 NPFFR1Q9GZQ6 430 aa16.96■□□□□ 0.31
CHFR-217ENST00000540537 GSTK1Q9Y2Q3 226 aa16.96■□□□□ 0.31
CHFR-217ENST00000540537 PCDHGB5Q9Y5G0 923 aa16.96■□□□□ 0.31
CHFR-217ENST00000540537 SESN1Q9Y6P5 492 aa16.96■□□□□ 0.31
CHFR-217ENST00000540537 KIAA2026Q5HYC2 2103 aa16.96■□□□□ 0.3
CHFR-217ENST00000540537 SIRPB1O00241 398 aa16.95■□□□□ 0.3
CHFR-217ENST00000540537 KCNAB3O43448 404 aa16.95■□□□□ 0.3
CHFR-217ENST00000540537 CHST1O43916 411 aa16.95■□□□□ 0.3
CHFR-217ENST00000540537 OR2H2O95918 312 aa16.95■□□□□ 0.3
CHFR-217ENST00000540537 GBX2P52951 348 aaPredicted RBP16.95■□□□□ 0.3
CHFR-217ENST00000540537 LDLRAD2Q5SZI1 272 aa16.95■□□□□ 0.3
CHFR-217ENST00000540537 MINOS1Q5TGZ0 78 aa16.95■□□□□ 0.3
CHFR-217ENST00000540537 LPCAT4Q643R3 524 aa16.95■□□□□ 0.3
CHFR-217ENST00000540537 RNF144BQ7Z419 303 aa16.95■□□□□ 0.3
CHFR-217ENST00000540537 SERPINA12Q8IW75 414 aa16.95■□□□□ 0.3
CHFR-217ENST00000540537 PARP16Q8N5Y8 322 aa16.95■□□□□ 0.3
CHFR-217ENST00000540537 OR5D18Q8NGL1 313 aa16.95■□□□□ 0.3
CHFR-217ENST00000540537 OR5D14Q8NGL3 314 aa16.95■□□□□ 0.3
CHFR-217ENST00000540537 OR5AK2Q8NH90 309 aa16.95■□□□□ 0.3
CHFR-217ENST00000540537 OR2T6Q8NHC8 308 aa16.95■□□□□ 0.3
CHFR-217ENST00000540537 RPS4Y2Q8TD47 263 aa16.95■□□□□ 0.3
CHFR-217ENST00000540537 RDH12Q96NR8 316 aa16.95■□□□□ 0.3
CHFR-217ENST00000540537 PDCD1LG2Q9BQ51 273 aa16.95■□□□□ 0.3
CHFR-217ENST00000540537 JAM3Q9BX67 310 aa16.95■□□□□ 0.3
CHFR-217ENST00000540537 ABCB10Q9NRK6 738 aa16.95■□□□□ 0.3
CHFR-217ENST00000540537 TCF19Q9Y242 345 aa16.95■□□□□ 0.3
CHFR-217ENST00000540537 SIGLEC9Q9Y336 463 aa16.95■□□□□ 0.3
CHFR-217ENST00000540537 UBE2J1Q9Y385 318 aaPredicted RBP16.95■□□□□ 0.3
CHFR-217ENST00000540537 MINOS1-NBL1R4GNA1 71 aa16.95■□□□□ 0.3
CHFR-217ENST00000540537 TET2Q6N021 2002 aaPredicted RBP16.95■□□□□ 0.3
CHFR-217ENST00000540537 NOTCH1P46531 2555 aa16.94■□□□□ 0.3
CHFR-217ENST00000540537 IGHV2-26A0A0B4J1V2 119 aa16.94■□□□□ 0.3
CHFR-217ENST00000540537 FUOMA2VDF0 154 aa16.94■□□□□ 0.3
CHFR-217ENST00000540537 E9PI62 339 aa16.94■□□□□ 0.3
CHFR-217ENST00000540537 SULT1B1O43704 296 aa16.94■□□□□ 0.3
CHFR-217ENST00000540537 LMO1P25800 156 aa16.94■□□□□ 0.3
CHFR-217ENST00000540537 DYNC1I2Q13409 638 aaKnown RBP16.94■□□□□ 0.3
CHFR-217ENST00000540537 FAM189A2Q15884 450 aa16.94■□□□□ 0.3
CHFR-217ENST00000540537 SSX2Q16385 188 aa16.94■□□□□ 0.3
CHFR-217ENST00000540537 C2orf68Q2NKX9 166 aa16.94■□□□□ 0.3
CHFR-217ENST00000540537 PLA1AQ53H76 456 aa16.94■□□□□ 0.3
CHFR-217ENST00000540537 TMEM133Q9H2Q1 129 aa16.94■□□□□ 0.3
CHFR-217ENST00000540537 SMPD3Q9NY59 655 aaPredicted RBP16.94■□□□□ 0.3
CHFR-217ENST00000540537 DHDHQ9UQ10 334 aa16.94■□□□□ 0.3
CHFR-217ENST00000540537 MEGF11A6BM72 1044 aa16.93■□□□□ 0.3
CHFR-217ENST00000540537 HCKP08631 526 aa16.93■□□□□ 0.3
CHFR-217ENST00000540537 DYNLT3P51808 116 aa16.93■□□□□ 0.3
CHFR-217ENST00000540537 ZP1P60852 638 aa16.93■□□□□ 0.3
CHFR-217ENST00000540537 HERPUD1Q15011 391 aa16.93■□□□□ 0.3
CHFR-217ENST00000540537 KISS1Q15726 138 aa16.93■□□□□ 0.3
CHFR-217ENST00000540537 ZSCAN26Q16670 478 aa16.93■□□□□ 0.3
CHFR-217ENST00000540537 TRAPPC6BQ86SZ2 158 aa16.93■□□□□ 0.3
CHFR-217ENST00000540537 CHST4Q8NCG5 386 aa16.93■□□□□ 0.3
CHFR-217ENST00000540537 ZNF555Q8NEP9 628 aa16.93■□□□□ 0.3
CHFR-217ENST00000540537 TSEN15Q8WW01 171 aaKnown RBP16.93■□□□□ 0.3
CHFR-217ENST00000540537 FGF20Q9NP95 211 aaPredicted RBP16.93■□□□□ 0.3
CHFR-217ENST00000540537 PITPNC1Q9UKF7 332 aa16.93■□□□□ 0.3
CHFR-217ENST00000540537 TRGV10A0A0A0MS01 117 aa16.92■□□□□ 0.3
CHFR-217ENST00000540537 BAG2O95816 211 aa16.92■□□□□ 0.3
CHFR-217ENST00000540537 CSN2P05814 226 aa16.92■□□□□ 0.3
CHFR-217ENST00000540537 LIMS3P0CW19 117 aa16.92■□□□□ 0.3
CHFR-217ENST00000540537 LIMS4P0CW20 117 aa16.92■□□□□ 0.3
CHFR-217ENST00000540537 DEFA6Q01524 100 aa16.92■□□□□ 0.3
CHFR-217ENST00000540537 Q6ZTK2 550 aa16.92■□□□□ 0.3
CHFR-217ENST00000540537 CORO2AQ92828 525 aa16.92■□□□□ 0.3
CHFR-217ENST00000540537 CPNE2Q96FN4 548 aaPredicted RBP16.92■□□□□ 0.3
CHFR-217ENST00000540537 CLEC7AQ9BXN2 247 aa16.92■□□□□ 0.3
CHFR-217ENST00000540537 GAL3ST2Q9H3Q3 398 aa16.92■□□□□ 0.3
CHFR-217ENST00000540537 TAS2R3Q9NYW6 316 aa16.92■□□□□ 0.3
CHFR-217ENST00000540537 A6NDX4 124 aa16.91■□□□□ 0.3
CHFR-217ENST00000540537 WBP4O75554 376 aaKnown RBP16.91■□□□□ 0.3
CHFR-217ENST00000540537 MMP23AO75900 390 aa16.91■□□□□ 0.3
CHFR-217ENST00000540537 TSPAN15O95858 294 aa16.91■□□□□ 0.3
CHFR-217ENST00000540537 TMEM225BP0DP42 221 aa16.91■□□□□ 0.3
CHFR-217ENST00000540537 ZNF44P15621 663 aa16.91■□□□□ 0.3
CHFR-217ENST00000540537 RAB13P51153 203 aa16.91■□□□□ 0.3
CHFR-217ENST00000540537 IL18R1Q13478 541 aa16.91■□□□□ 0.3
CHFR-217ENST00000540537 ZNF691Q5VV52 312 aa16.91■□□□□ 0.3
CHFR-217ENST00000540537 ZNF529Q6P280 563 aa16.91■□□□□ 0.3
CHFR-217ENST00000540537 Q6P435 159 aa16.91■□□□□ 0.3
CHFR-217ENST00000540537 CCBE1Q6UXH8 406 aaPredicted RBP16.91■□□□□ 0.3
CHFR-217ENST00000540537 KLHDC1Q8N7A1 406 aa16.91■□□□□ 0.3
CHFR-217ENST00000540537 NDNFQ8TB73 568 aa16.91■□□□□ 0.3
CHFR-217ENST00000540537 STMN2Q93045 179 aa16.91■□□□□ 0.3
CHFR-217ENST00000540537 NKX3-1Q99801 234 aaPredicted RBP16.91■□□□□ 0.3
CHFR-217ENST00000540537 A0A0G2JK05 382 aa16.9■□□□□ 0.3
CHFR-217ENST00000540537 SLC33A1O00400 549 aaPredicted RBP16.9■□□□□ 0.3
CHFR-217ENST00000540537 RAB3AP20336 220 aa16.9■□□□□ 0.3
CHFR-217ENST00000540537 DCKP27707 260 aa16.9■□□□□ 0.3
CHFR-217ENST00000540537 MTNR1BP49286 362 aa16.9■□□□□ 0.3
CHFR-217ENST00000540537 AESQ08117 197 aa16.9■□□□□ 0.3
CHFR-217ENST00000540537 SMN1Q16637 294 aaKnown RBP16.9■□□□□ 0.3
CHFR-217ENST00000540537 CCDC58Q4VC31 144 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms