RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 TRAV39A0A0B4J263 110 aa12.12□□□□□ -0.47
UBE3B-210ENST00000539599 RRP8O43159 456 aaKnown RBP12.12□□□□□ -0.47
UBE3B-210ENST00000539599 LAMTOR5O43504 91 aa12.12□□□□□ -0.47
UBE3B-210ENST00000539599 MMP7P09237 267 aaPredicted RBP12.12□□□□□ -0.47
UBE3B-210ENST00000539599 SCTP09683 121 aa12.12□□□□□ -0.47
UBE3B-210ENST00000539599 HAAOP46952 286 aa12.12□□□□□ -0.47
UBE3B-210ENST00000539599 CYB561P49447 251 aa12.12□□□□□ -0.47
UBE3B-210ENST00000539599 CAV2P51636 162 aa12.12□□□□□ -0.47
UBE3B-210ENST00000539599 FOXO1Q12778 655 aa12.12□□□□□ -0.47
UBE3B-210ENST00000539599 SMCO1Q147U7 214 aa12.12□□□□□ -0.47
UBE3B-210ENST00000539599 SURF2Q15527 256 aaPredicted RBP12.12□□□□□ -0.47
UBE3B-210ENST00000539599 ABLIM2Q6H8Q1 611 aa12.12□□□□□ -0.47
UBE3B-210ENST00000539599 LHFPL2Q6ZUX7 228 aa12.12□□□□□ -0.47
UBE3B-210ENST00000539599 FOXJ2Q9P0K8 574 aa12.12□□□□□ -0.47
UBE3B-210ENST00000539599 KIAA2026Q5HYC2 2103 aa12.11□□□□□ -0.47
UBE3B-210ENST00000539599 A0A1W2PNU3 283 aaPredicted RBP12.11□□□□□ -0.47
UBE3B-210ENST00000539599 APOC1P02654 83 aa12.11□□□□□ -0.47
UBE3B-210ENST00000539599 CLINT1Q14677 625 aa12.11□□□□□ -0.47
UBE3B-210ENST00000539599 MIDNQ504T8 468 aa12.11□□□□□ -0.47
UBE3B-210ENST00000539599 TMEM42Q69YG0 159 aa12.11□□□□□ -0.47
UBE3B-210ENST00000539599 BTNL8Q6UX41 500 aa12.11□□□□□ -0.47
UBE3B-210ENST00000539599 MSI2Q96DH6 328 aaKnown RBP12.11□□□□□ -0.47
UBE3B-210ENST00000539599 SGCZQ96LD1 299 aa12.11□□□□□ -0.47
UBE3B-210ENST00000539599 ABHD14AQ9BUJ0 271 aa12.11□□□□□ -0.47
UBE3B-210ENST00000539599 SF3B5Q9BWJ5 86 aaKnown RBP12.11□□□□□ -0.47
UBE3B-210ENST00000539599 DNAJB11Q9UBS4 358 aa12.11□□□□□ -0.47
UBE3B-210ENST00000539599 MLXQ9UH92 298 aa12.11□□□□□ -0.47
UBE3B-210ENST00000539599 TUBD1Q9UJT1 453 aa12.11□□□□□ -0.47
UBE3B-210ENST00000539599 NOSIPQ9Y314 301 aaKnown RBP12.11□□□□□ -0.47
UBE3B-210ENST00000539599 GJE1A6NN92 205 aa12.11□□□□□ -0.47
UBE3B-210ENST00000539599 MAGEA5P43359 124 aa12.11□□□□□ -0.47
UBE3B-210ENST00000539599 KCNJ3P48549 501 aa12.11□□□□□ -0.47
UBE3B-210ENST00000539599 F2RL1P55085 397 aa12.11□□□□□ -0.47
UBE3B-210ENST00000539599 RBM11P57052 281 aaKnown RBP12.11□□□□□ -0.47
UBE3B-210ENST00000539599 HOXA4Q00056 320 aaPredicted RBP12.11□□□□□ -0.47
UBE3B-210ENST00000539599 SPIN3Q5JUX0 258 aa12.11□□□□□ -0.47
UBE3B-210ENST00000539599 C17orf78Q8N4C9 275 aa12.11□□□□□ -0.47
UBE3B-210ENST00000539599 RXFP4Q8TDU9 374 aa12.11□□□□□ -0.47
UBE3B-210ENST00000539599 INTS12Q96CB8 462 aaKnown RBP12.11□□□□□ -0.47
UBE3B-210ENST00000539599 BCO1Q9HAY6 547 aa12.11□□□□□ -0.47
UBE3B-210ENST00000539599 IGKV1D-13A0A0B4J2D9 117 aa12.1□□□□□ -0.47
UBE3B-210ENST00000539599 NKX2-6A6NCS4 301 aa12.1□□□□□ -0.47
UBE3B-210ENST00000539599 CST4P01036 141 aa12.1□□□□□ -0.47
UBE3B-210ENST00000539599 IGKV1-13P0DP09 117 aa12.1□□□□□ -0.47
UBE3B-210ENST00000539599 SULT1A2P50226 295 aa12.1□□□□□ -0.47
UBE3B-210ENST00000539599 GFRA1P56159 465 aa12.1□□□□□ -0.47
UBE3B-210ENST00000539599 IZUMO4Q1ZYL8 232 aa12.1□□□□□ -0.47
UBE3B-210ENST00000539599 DCAF12Q5T6F0 453 aa12.1□□□□□ -0.47
UBE3B-210ENST00000539599 FBXW12Q6X9E4 464 aa12.1□□□□□ -0.47
UBE3B-210ENST00000539599 HPSE2Q8WWQ2 592 aa12.1□□□□□ -0.47
UBE3B-210ENST00000539599 ISOC2Q96AB3 205 aa12.1□□□□□ -0.47
UBE3B-210ENST00000539599 SLC7A11Q9UPY5 501 aa12.1□□□□□ -0.47
UBE3B-210ENST00000539599 CARHSP1Q9Y2V2 147 aaKnown RBP12.1□□□□□ -0.47
UBE3B-210ENST00000539599 FAM24AA6NFZ4 105 aa12.1□□□□□ -0.47
UBE3B-210ENST00000539599 H7C2Y5 167 aa12.1□□□□□ -0.47
UBE3B-210ENST00000539599 SYNGR1O43759 233 aa12.1□□□□□ -0.47
UBE3B-210ENST00000539599 PDCD6O75340 191 aa12.1□□□□□ -0.47
UBE3B-210ENST00000539599 MRPL33O75394 65 aaKnown RBP12.1□□□□□ -0.47
UBE3B-210ENST00000539599 MALLQ13021 153 aa12.1□□□□□ -0.47
UBE3B-210ENST00000539599 SPATA46Q5T0L3 261 aa12.1□□□□□ -0.47
UBE3B-210ENST00000539599 C10orf91Q5T1B1 145 aa12.1□□□□□ -0.47
UBE3B-210ENST00000539599 USB1Q9BQ65 265 aaKnown RBP12.1□□□□□ -0.47
UBE3B-210ENST00000539599 ZNF552Q9H707 407 aaPredicted RBP12.1□□□□□ -0.47
UBE3B-210ENST00000539599 DECR2Q9NUI1 292 aa12.1□□□□□ -0.47
UBE3B-210ENST00000539599 KCNIP3Q9Y2W7 256 aa12.1□□□□□ -0.47
UBE3B-210ENST00000539599 MED12LQ86YW9 2145 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 HSD17B6O14756 317 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 CRYBA1P05813 215 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 SPP1P10451 314 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 PRKACAP17612 351 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 POLR2GP62487 172 aaKnown RBP eCLIP12.09□□□□□ -0.47
UBE3B-210ENST00000539599 LIAT1Q6ZQX7 453 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 WDR5BQ86VZ2 330 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 NEK7Q8TDX7 302 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 EXTL1Q92935 676 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 ZNF286AQ9HBT8 521 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 HSF4Q9ULV5 492 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 GTF3C1Q12789 2109 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 ZNF816-ZNF321PA0A0X1KG74 233 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 MEX3AA1L020 520 aaKnown RBP12.09□□□□□ -0.47
UBE3B-210ENST00000539599 ARGFXA6NJG6 315 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 FAM157AC9JC47 383 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 PPYP01298 95 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 PLA2G5P39877 138 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 FUT6P51993 359 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 PRDX4Q13162 271 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 HERPUD1Q15011 391 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 KRTAP27-1Q3LI81 207 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 C20orf204Q6ZNR8 217 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 DMBX1Q8NFW5 382 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 C10orf35Q96D05 121 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 SEC11CQ9BY50 192 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 ESRP2Q9H6T0 727 aaKnown RBP12.09□□□□□ -0.47
UBE3B-210ENST00000539599 C12orf49Q9H741 205 aa12.09□□□□□ -0.47
UBE3B-210ENST00000539599 A0A1W2PR80 420 aa12.08□□□□□ -0.48
UBE3B-210ENST00000539599 ATXN7O15265 892 aaPredicted RBP12.08□□□□□ -0.48
UBE3B-210ENST00000539599 NEURL1O76050 574 aa12.08□□□□□ -0.48
UBE3B-210ENST00000539599 GNRHRP30968 328 aa12.08□□□□□ -0.48
UBE3B-210ENST00000539599 OR8B8Q15620 311 aa12.08□□□□□ -0.48
UBE3B-210ENST00000539599 SWI5Q1ZZU3 235 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms