RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 CLRN3Q8NCR9 226 aa11.67□□□□□ -0.54
SMG6-203ENST00000536871 HPSE2Q8WWQ2 592 aa11.67□□□□□ -0.54
SMG6-203ENST00000536871 ZNF75AQ96N20 296 aa11.67□□□□□ -0.54
SMG6-203ENST00000536871 MICU1Q9BPX6 476 aa11.67□□□□□ -0.54
SMG6-203ENST00000536871 METTL8Q9H825 291 aaKnown RBP11.67□□□□□ -0.54
SMG6-203ENST00000536871 CDH20Q9HBT6 801 aa11.67□□□□□ -0.54
SMG6-203ENST00000536871 SDHAF2Q9NX18 166 aa11.67□□□□□ -0.54
SMG6-203ENST00000536871 COL6A3P12111 3177 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 C13orf42A0A1B0GVH6 325 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 CRYM-AS1A6NIL9 109 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 EEF1E1-BLOC1S5C9J1V9 151 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 ZNF728P0DKX0 622 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 RPS2P15880 293 aaKnown RBP11.66□□□□□ -0.54
SMG6-203ENST00000536871 GPM6AP51674 278 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 TCF15Q12870 199 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 BTN1A1Q13410 526 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 ABCA11PQ4W5N1 156 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 GALNT14Q96FL9 552 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 SEC22AQ96IW7 307 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 TRIB1Q96RU8 372 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 RTL8AQ9BWD3 113 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 SUCNR1Q9BXA5 334 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 SLC25A32Q9H2D1 315 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 DNAJB11Q9UBS4 358 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 TEX13DA0A0J9YY54 714 aaPredicted RBP11.66□□□□□ -0.54
SMG6-203ENST00000536871 MPTX1A8MV57 137 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 CCSO14618 274 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 NGFP01138 241 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 LYL1P12980 280 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 CCL2P13500 99 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 RAC2P15153 192 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 ZNF14P17017 642 aaPredicted RBP11.66□□□□□ -0.54
SMG6-203ENST00000536871 GLRA1P23415 457 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 WNT5AP41221 380 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 SRPXP78539 464 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 GABRA6Q16445 453 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 MAFIPQ8WZ33 124 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 EXTL1Q92935 676 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 USB1Q9BQ65 265 aaKnown RBP11.66□□□□□ -0.54
SMG6-203ENST00000536871 COQ3Q9NZJ6 369 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 POLDIP2Q9Y2S7 368 aa11.66□□□□□ -0.54
SMG6-203ENST00000536871 BDP1A6H8Y1 2624 aa11.65□□□□□ -0.54
SMG6-203ENST00000536871 MYO15AQ9UKN7 3530 aa11.65□□□□□ -0.54
SMG6-203ENST00000536871 TRBV6-6A0A0A6YYG2 114 aa11.65□□□□□ -0.54
SMG6-203ENST00000536871 H7C1Q1 480 aa11.65□□□□□ -0.54
SMG6-203ENST00000536871 J3QT63 122 aa11.65□□□□□ -0.54
SMG6-203ENST00000536871 CBR1P16152 277 aa11.65□□□□□ -0.54
SMG6-203ENST00000536871 COX5AP20674 150 aa11.65□□□□□ -0.54
SMG6-203ENST00000536871 BCL3P20749 454 aa11.65□□□□□ -0.54
SMG6-203ENST00000536871 HERV-K104P61576 105 aa11.65□□□□□ -0.54
SMG6-203ENST00000536871 SLC9A3R2Q15599 337 aa11.65□□□□□ -0.54
SMG6-203ENST00000536871 DEFB109BQ30KR1 87 aa11.65□□□□□ -0.54
SMG6-203ENST00000536871 PRSS54Q6PEW0 395 aa11.65□□□□□ -0.54
SMG6-203ENST00000536871 SLC22A25Q6T423 547 aa11.65□□□□□ -0.54
SMG6-203ENST00000536871 OR5M9Q8NGP3 310 aa11.65□□□□□ -0.54
SMG6-203ENST00000536871 MOB3AQ96BX8 217 aa11.65□□□□□ -0.54
SMG6-203ENST00000536871 HDHD3Q9BSH5 251 aaPredicted RBP11.65□□□□□ -0.54
SMG6-203ENST00000536871 PFDN2Q9UHV9 154 aa11.65□□□□□ -0.54
SMG6-203ENST00000536871 IGKV1D-8A0A087WSZ0 117 aa11.64□□□□□ -0.55
SMG6-203ENST00000536871 DIRAS3O95661 229 aa11.64□□□□□ -0.55
SMG6-203ENST00000536871 KNG1P01042 644 aa11.64□□□□□ -0.55
SMG6-203ENST00000536871 H2AFB1P0C5Y9 115 aa11.64□□□□□ -0.55
SMG6-203ENST00000536871 IGHV1-2P23083 117 aa11.64□□□□□ -0.55
SMG6-203ENST00000536871 PTGER4P35408 488 aa11.64□□□□□ -0.55
SMG6-203ENST00000536871 NOVA1P51513 510 aaKnown RBP11.64□□□□□ -0.55
SMG6-203ENST00000536871 PRSS12P56730 875 aa11.64□□□□□ -0.55
SMG6-203ENST00000536871 EIF5AP63241 154 aaKnown RBP11.64□□□□□ -0.55
SMG6-203ENST00000536871 PMP22Q01453 160 aa11.64□□□□□ -0.55
SMG6-203ENST00000536871 NAAAQ02083 359 aa11.64□□□□□ -0.55
SMG6-203ENST00000536871 PDZD9Q8IXQ8 264 aa11.64□□□□□ -0.55
SMG6-203ENST00000536871 LRTM2Q8N967 370 aa11.64□□□□□ -0.55
SMG6-203ENST00000536871 ST8SIA2Q92186 375 aa11.64□□□□□ -0.55
SMG6-203ENST00000536871 SLAMF9Q96A28 289 aa11.64□□□□□ -0.55
SMG6-203ENST00000536871 WDR87Q6ZQQ6 2873 aa11.64□□□□□ -0.55
SMG6-203ENST00000536871 TNRC6AQ8NDV7 1962 aaKnown RBP11.64□□□□□ -0.55
SMG6-203ENST00000536871 LRP5LA4QPB2 252 aa11.63□□□□□ -0.55
SMG6-203ENST00000536871 RNF222A6NCQ9 220 aa11.63□□□□□ -0.55
SMG6-203ENST00000536871 TMEM210A6NLX4 147 aa11.63□□□□□ -0.55
SMG6-203ENST00000536871 NAPSAO96009 420 aa11.63□□□□□ -0.55
SMG6-203ENST00000536871 TK1P04183 234 aa11.63□□□□□ -0.55
SMG6-203ENST00000536871 S100A6P06703 90 aa11.63□□□□□ -0.55
SMG6-203ENST00000536871 FGF2P09038 288 aa11.63□□□□□ -0.55
SMG6-203ENST00000536871 ACAA1P09110 424 aaPredicted RBP11.63□□□□□ -0.55
SMG6-203ENST00000536871 OPRM1P35372 400 aa11.63□□□□□ -0.55
SMG6-203ENST00000536871 MDH2P40926 338 aaKnown RBP11.63□□□□□ -0.55
SMG6-203ENST00000536871 NPBWR2P48146 333 aa11.63□□□□□ -0.55
SMG6-203ENST00000536871 PPP1CBP62140 327 aa11.63□□□□□ -0.55
SMG6-203ENST00000536871 ANKRD55Q3KP44 614 aa11.63□□□□□ -0.55
SMG6-203ENST00000536871 LRRC37A5PQ49AS3 106 aa11.63□□□□□ -0.55
SMG6-203ENST00000536871 RGS7BPQ6MZT1 257 aaPredicted RBP11.63□□□□□ -0.55
SMG6-203ENST00000536871 FAM169BQ8N8A8 192 aa11.63□□□□□ -0.55
SMG6-203ENST00000536871 LINC00052Q96N35 136 aa11.63□□□□□ -0.55
SMG6-203ENST00000536871 NAA60Q9H7X0 242 aa11.63□□□□□ -0.55
SMG6-203ENST00000536871 TREM2Q9NZC2 230 aa11.63□□□□□ -0.55
SMG6-203ENST00000536871 MTCH1Q9NZJ7 389 aa11.63□□□□□ -0.55
SMG6-203ENST00000536871 MBD2Q9UBB5 411 aa11.63□□□□□ -0.55
SMG6-203ENST00000536871 CSAG2Q9Y5P2 127 aa11.63□□□□□ -0.55
SMG6-203ENST00000536871 TM4SF5O14894 197 aa11.63□□□□□ -0.55
SMG6-203ENST00000536871 SMPD2O60906 423 aa11.63□□□□□ -0.55
SMG6-203ENST00000536871 RLN2P04090 185 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms