RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 PSG2P11465 335 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 SELLP14151 372 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 CRHBPP24387 322 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 MPZP25189 248 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 HAAOP46952 286 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 ACTC1P68032 377 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 ACTA1P68133 377 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 UBE2V2Q15819 145 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 C9orf139Q6ZV77 190 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 FAM220AQ7Z4H9 259 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 LHFPL3Q86UP9 236 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 CALHM1Q8IU99 346 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 IQCF2Q8IXL9 164 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 SPARTQ8N0X7 666 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 PNLDC1Q8NA58 520 aaKnown RBP6.94□□□□□ -1.3
SSBP3-212ENST00000528930 CCDC54Q8NEL0 328 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 OR2G2Q8NGZ5 317 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 OR4F5Q8NH21 305 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 ST8SIA4Q92187 359 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 PELI1Q96FA3 418 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 ZNF486Q96H40 463 aaPredicted RBP6.94□□□□□ -1.3
SSBP3-212ENST00000528930 ZNF488Q96MN9 340 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 Q96MT0 163 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 SIRPDQ9H106 197 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 DNAJB11Q9UBS4 358 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 MAB21L2Q9Y586 359 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 IGKV1-27A0A075B6S5 117 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 TRAV40A0A0B4J280 105 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 CENPVL3A0A0U1RRI6 287 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 LOC107986453A0A1B0GWG9 222 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 OR4C45A6NMZ5 311 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 OR2AT4A6NND4 320 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 J3QLW9 94 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 K7EIL1 84 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 SIGLEC5O15389 551 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 NDUFB3O43676 98 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 TOX4O94842 621 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 CLIC3O95833 236 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 UBCP0CG48 685 aaKnown RBP6.93□□□□□ -1.3
SSBP3-212ENST00000528930 ZNF19P17023 458 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 CCR9P51686 369 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 ERVK11-1P61568 191 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 ARF6P62330 175 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 ZNF45Q02386 682 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 RAB40BQ12829 278 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 IKZF1Q13422 519 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 GALEQ14376 348 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 SLC9A3R2Q15599 337 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 CTF1Q16619 201 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 SMN1Q16637 294 aaKnown RBP6.93□□□□□ -1.3
SSBP3-212ENST00000528930 ZNF691Q5VV52 312 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 TMEM244Q5VVB8 128 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 BRD3OSQ6XYD6 125 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 ACP7Q6ZNF0 438 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 AKAP14Q86UN6 197 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 ANGPTL5Q86XS5 388 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 ZNF573Q86YE8 665 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 POC1AQ8NBT0 407 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 OR52I1Q8NGK6 324 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 GRPEL2Q8TAA5 225 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 C8orf46Q8TAG6 207 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 C10orf35Q96D05 121 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 SDSLQ96GA7 329 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 C4orf36Q96KX1 117 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 DMRTB1Q96MA1 342 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 WDFY2Q96P53 400 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 PCGF1Q9BSM1 259 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 DCTN5Q9BTE1 182 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 ALG8Q9BVK2 526 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 CHST5Q9GZS9 411 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 MS4A7Q9GZW8 240 aaPredicted RBP6.93□□□□□ -1.3
SSBP3-212ENST00000528930 PRDM13Q9H4Q3 707 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 CNTD2Q9H8S5 307 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 ISG20L2Q9H9L3 353 aaKnown RBP6.93□□□□□ -1.3
SSBP3-212ENST00000528930 HES4Q9HCC6 221 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 ERVK13-1Q9NX77 482 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 RASL12Q9NYN1 266 aa6.93□□□□□ -1.3
SSBP3-212ENST00000528930 IGKV1-9A0A0C4DH69 117 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 CLPSL1A2RUU4 121 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 E9PI62 339 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 J3QT63 122 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 NDUFA7O95182 113 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 FADS2O95864 444 aaKnown RBP6.92□□□□□ -1.3
SSBP3-212ENST00000528930 MPIG6BO95866 241 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 HTR1AP08908 422 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 LIMS3P0CW19 117 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 LIMS4P0CW20 117 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 ETV6P41212 452 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 GABRA2P47869 451 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 FUT6P51993 359 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 RAG2P55895 527 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 CAV3P56539 151 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 IFITM2Q01629 132 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 ID3Q02535 119 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 BAMBIQ13145 260 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 ALKBH1Q13686 389 aaKnown RBP6.92□□□□□ -1.3
SSBP3-212ENST00000528930 LRRC10Q5BKY1 277 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 C6orf141Q5SZD1 244 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 SYT6Q5T7P8 510 aaPredicted RBP6.92□□□□□ -1.3
SSBP3-212ENST00000528930 SLC16A12Q6ZSM3 486 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms