RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 CYB5AP00167 134 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 TK1P04183 234 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 CHRM2P08172 466 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 MGMTP16455 207 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 MYL9P24844 172 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 OR3A1P47881 315 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 GZMKP49863 264 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 TMEM50BP56557 158 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 IL13RA1P78552 427 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 LCN2P80188 198 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 IL13RA2Q14627 380 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 SPCS2Q15005 226 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 TAF9Q16594 264 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 TIMM50Q3ZCQ8 353 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 CYB5R2Q6BCY4 276 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 BTN2A1Q7KYR7 527 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 TCF23Q7RTU1 214 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 GPR141Q7Z602 305 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 ZNF561Q8N587 486 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 PNLDC1Q8NA58 520 aaKnown RBP8.9□□□□□ -0.98
NEDD8-205ENST00000527046 OR8B3Q8NGG8 313 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 OR5H6Q8NGV6 325 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 C8orf46Q8TAG6 207 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 FAM3DQ96BQ1 224 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 RAB39BQ96DA2 213 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 CPNE2Q96FN4 548 aaPredicted RBP8.9□□□□□ -0.98
NEDD8-205ENST00000527046 MED30Q96HR3 178 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 SNX22Q96L94 193 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 OR8B2Q96RD0 313 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 NICN1Q9BSH3 213 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 SSBP3Q9BWW4 388 aaPredicted RBP8.9□□□□□ -0.98
NEDD8-205ENST00000527046 TM2D1Q9BX74 207 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 IFT22Q9H7X7 185 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 LPAR2Q9HBW0 351 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 OR5V1Q9UGF6 321 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 STEAP1Q9UHE8 339 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 OPN4Q9UHM6 478 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 ST3GAL6Q9Y274 331 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 PPIAL4CA0A0B4J2A2 164 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 KIR2DS1A0A191URI9 304 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 SIRPB1O00241 398 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 NDUFB3O43676 98 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 ZNF780AO75290 641 aaPredicted RBP8.89□□□□□ -0.99
NEDD8-205ENST00000527046 BPNT1O95861 308 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 PAHP00439 452 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 TGFAP01135 160 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 IL1AP01583 271 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 MSMBP08118 114 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 CGB3P0DN86 165 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 CGB7P0DN87 165 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 GTF2F2P13984 249 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 ZNF16P17020 682 aaPredicted RBP8.89□□□□□ -0.99
NEDD8-205ENST00000527046 NPY4RP50391 375 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 PSMD7P51665 324 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 DVL1P1P54792 670 aaPredicted RBP8.89□□□□□ -0.99
NEDD8-205ENST00000527046 DLX6P56179 175 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 RPS27AP62979 156 aaKnown RBP8.89□□□□□ -0.99
NEDD8-205ENST00000527046 PAX8Q06710 450 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 IKZF1Q13422 519 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 BLMHQ13867 455 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 KCNJ8Q15842 424 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 RAB11BQ15907 218 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 SFXN4Q6P4A7 337 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 BRICD5Q6PL45 260 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 SLC36A1Q7Z2H8 476 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 OR2W3Q7Z3T1 314 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 CLVS1Q8IUQ0 354 aaPredicted RBP8.89□□□□□ -0.99
NEDD8-205ENST00000527046 PLPPR1Q8TBJ4 325 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 FAM46BQ96A09 425 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 MRPS24Q96EL2 167 aaKnown RBP8.89□□□□□ -0.99
NEDD8-205ENST00000527046 COQ2Q96H96 371 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 DCTN5Q9BTE1 182 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 TMPRSS13Q9BYE2 586 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 FAM234AQ9H0X4 552 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 PLGRKTQ9HBL7 147 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 C19orf12Q9NSK7 152 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 RCC2Q9P258 522 aaKnown RBP8.89□□□□□ -0.99
NEDD8-205ENST00000527046 SLC25A10Q9UBX3 287 aaPredicted RBP8.89□□□□□ -0.99
NEDD8-205ENST00000527046 CLN8Q9UBY8 286 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 SCOCQ9UIL1 159 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 RPUSD1Q9UJJ7 312 aaKnown RBP8.89□□□□□ -0.99
NEDD8-205ENST00000527046 INSIG2Q9Y5U4 225 aa8.89□□□□□ -0.99
NEDD8-205ENST00000527046 SH2D1BO14796 132 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 DEGS1O15121 323 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 FOXH1O75593 365 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 CRTAPO75718 401 aaPredicted RBP8.88□□□□□ -0.99
NEDD8-205ENST00000527046 UBBP0CG47 229 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 SNRPBP14678 240 aaKnown RBP8.88□□□□□ -0.99
NEDD8-205ENST00000527046 ARSBP15848 533 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 BMXP51813 675 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 CAPZA1P52907 286 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 TMBIM6P55061 237 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 ERVFRD-1P60508 538 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 GNB2P62879 340 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 GPR176Q14439 515 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 C11orf91Q3C1V1 193 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 MOGAT2Q3SYC2 334 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 ESCO2Q56NI9 601 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 FOXB2Q5VYV0 432 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 TMEM200BQ69YZ2 307 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms