RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 MSMBP08118 114 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 INHBBP09529 407 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 CLEC2LP0C7M8 214 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 VSIG8P0DPA2 414 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 SLC2A2P11168 524 aaPredicted RBP4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 SNRPBP14678 240 aaKnown RBP4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 ZNF182P17025 639 aaPredicted RBP4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 RAB6AP20340 208 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 FUT3P21217 361 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 GATA3P23771 443 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 BLVRBP30043 206 aaPredicted RBP4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 RPS19P39019 145 aaKnown RBP4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 MNDAP41218 407 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 KCNJ3P48549 501 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 CEBPDP49716 269 aaPredicted RBP4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 VEGFCP49767 419 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 CAV3P56539 151 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 RBM11P57052 281 aaKnown RBP4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 SCAND1P57086 179 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 ERVK11-1P61568 191 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 LMO4P61968 165 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 RPS27AP62979 156 aaKnown RBP4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 ARFRP1Q13795 201 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 EDDM3AQ14507 147 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 ZNF146Q15072 292 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 PDCD1Q15116 288 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 TAF9Q16594 264 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 TMEM249Q2WGJ8 235 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 C11orf91Q3C1V1 193 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 PIGYQ3MUY2 71 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 ATPAF1Q5TC12 328 aaPredicted RBP4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 WDR25Q64LD2 544 aaPredicted RBP4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 RAB12Q6IQ22 244 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 FAM166AQ6J272 317 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 FAHD2BQ6P2I3 314 aaPredicted RBP4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 LYPD2Q6UXB3 125 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 SPNS3Q6ZMD2 512 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 ZNF788Q6ZQV5 615 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 Q6ZTK2 550 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 C1QL2Q7Z5L3 287 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 FAM216BQ8N7L0 139 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 ZNF565Q8N9K5 539 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 ZNRF1Q8ND25 227 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 MAPK1IP1LQ8NDC0 245 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 OR4M2Q8NGB6 313 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 ANGPTL6Q8NI99 470 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 SLC25A46Q96AG3 418 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 ISOC1Q96CN7 298 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 DGCR14Q96DF8 476 aaKnown RBP4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 SEH1LQ96EE3 360 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 SDSLQ96GA7 329 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 FAHD2AQ96GK7 314 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 GAFA1Q96PS6 74 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 NAA50Q9GZZ1 169 aaKnown RBP4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 SEBOXQ9HB31 216 aaPredicted RBP4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 HES4Q9HCC6 221 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 BATF3Q9NR55 127 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 YAE1D1Q9NRH1 226 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 PLEKHJ1Q9NW61 149 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 ETAA1Q9NY74 926 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 KCNIP1Q9NZI2 227 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 ONECUT1Q9UBC0 465 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 COMMD3Q9UBI1 195 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 ETV7Q9Y603 341 aa4.55□□□□□ -1.68
SCARNA16.4-201ENST00000516956 RTTNQ86VV8 2226 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 ITPR2Q14571 2701 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 CACNA1DQ01668 2161 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 SPG11Q96JI7 2443 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 DYSFO75923 2080 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 A0A075B6Q4 140 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 IGKV1D-17A0A075B6S4 117 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 MEIKINA0A087WXM9 373 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 PPIAL4CA0A0B4J2A2 164 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 A0A0G2JK05 382 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 TMEM272A0A1B0GTI8 110 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 TMEM30CPA0ZSE6 113 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 UBE2QL1A1L167 161 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 F8VVB4 439 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 F8VWA3 439 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 J3QLI3 93 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 K7N7A8 449 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 ZNF701M0R085 212 aaPredicted RBP4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 PDCD6O75340 191 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 GLAP06280 429 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 CD3GP09693 182 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 PPIAL4GP0DN37 164 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 ZNF16P17020 682 aaPredicted RBP4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 S100A5P33763 92 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 SRP14P37108 136 aaKnown RBP4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 DVL1P1P54792 670 aaPredicted RBP4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 RPL31P62899 125 aaKnown RBP4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 MEF2CQ06413 473 aaPredicted RBP4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 SCGB2A2Q13296 93 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 ATXN7L3Q14CW9 347 aaPredicted RBP4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 CTF1Q16619 201 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 NHLRC3Q5JS37 347 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 KRBOX4Q5JUW0 171 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 UBE2NLQ5JXB2 153 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 METTL11BQ5VVY1 283 aa4.54□□□□□ -1.68
SCARNA16.4-201ENST00000516956 ASPHD2Q6ICH7 369 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms