RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 AMY2BP19961 511 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 CPT2P23786 658 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 DUSP1P28562 367 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 GZMKP49863 264 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 CAPZA1P52907 286 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 CAV3P56539 151 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 CLDN12P56749 244 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 SEC61A1P61619 476 aaKnown RBP8.34□□□□□ -1.07
NUP54-203ENST00000504173 VBP1P61758 197 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 NCS1P62166 190 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 GNB2P62879 340 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 IL13RA1P78552 427 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 IKZF1Q13422 519 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 IL13RA2Q14627 380 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 SPIN3Q5JUX0 258 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 ATPAF1Q5TC12 328 aaPredicted RBP8.34□□□□□ -1.07
NUP54-203ENST00000504173 FAM166AQ6J272 317 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 DUX4L9Q6RFH8 374 aaPredicted RBP8.34□□□□□ -1.07
NUP54-203ENST00000504173 ZNF788Q6ZQV5 615 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 NR2C2APQ86WQ0 139 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 OSR2Q8N2R0 312 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 ZNF561Q8N587 486 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 FAM216BQ8N7L0 139 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 TMEM185AQ8NFB2 350 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 FAM46BQ96A09 425 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 SDSLQ96GA7 329 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 MED30Q96HR3 178 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 C1orf147Q96MC9 270 aaPredicted RBP8.34□□□□□ -1.07
NUP54-203ENST00000504173 SSBP3Q9BWW4 388 aaPredicted RBP8.34□□□□□ -1.07
NUP54-203ENST00000504173 CST11Q9H112 138 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 BANF2Q9H503 90 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 KAAG1Q9UBP8 84 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 DUX4Q9UBX2 424 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 CLN8Q9UBY8 286 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 STEAP1Q9UHE8 339 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 SIRPB1O00241 398 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 DVL1O14640 695 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 SH2D1BO14796 132 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 FOXH1O75593 365 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 MPIG6BO95866 241 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 OR2H2O95918 312 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 CHRM2P08172 466 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 IGHV4-31P0DP07 118 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 VSIG8P0DPA2 414 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 SELLP14151 372 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 ZNF44P15621 663 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 MGMTP16455 207 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 NPY4RP50391 375 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 RBM11P57052 281 aaKnown RBP8.33□□□□□ -1.08
NUP54-203ENST00000504173 COL10A1Q03692 680 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 SCN1BQ07699 218 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 ZNF146Q15072 292 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 CTF1Q16619 201 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 PIGYQ3MUY2 71 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 LRRC10Q5BKY1 277 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 WDR25Q64LD2 544 aaPredicted RBP8.33□□□□□ -1.08
NUP54-203ENST00000504173 SFXN4Q6P4A7 337 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 ASCC1Q8N9N2 400 aaKnown RBP8.33□□□□□ -1.08
NUP54-203ENST00000504173 LINC01356Q8N9X3 169 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 TMEM104Q8NE00 496 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 Q8NFD4 153 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 OR51D1Q8NGF3 324 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 OR51T1Q8NGJ9 327 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 RAB2BQ8WUD1 216 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 ST8SIA4Q92187 359 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 SLC25A28Q96A46 364 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 FAM3DQ96BQ1 224 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 MRPS24Q96EL2 167 aaKnown RBP8.33□□□□□ -1.08
NUP54-203ENST00000504173 KCNK15Q9H427 330 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 LPAR2Q9HBW0 351 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 LPAR3Q9UBY5 353 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 DAPK2Q9UIK4 370 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 ST3GAL6Q9Y274 331 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 MAB21L2Q9Y586 359 aa8.33□□□□□ -1.08
NUP54-203ENST00000504173 A0A0B4J203 849 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 CCDC160A6NGH7 325 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 TMEM14DPA8MWL7 114 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 A8MXK9 166 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 B4DSR2 109 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 GEMIN2O14893 280 aaKnown RBP8.32□□□□□ -1.08
NUP54-203ENST00000504173 DEGS1O15121 323 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 OR7C1O76099 320 aaPredicted RBP8.32□□□□□ -1.08
NUP54-203ENST00000504173 IL1AP01583 271 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 SLC2A2P11168 524 aaPredicted RBP8.32□□□□□ -1.08
NUP54-203ENST00000504173 ZNF16P17020 682 aaPredicted RBP8.32□□□□□ -1.08
NUP54-203ENST00000504173 NDUFB7P17568 137 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 GABRR1P24046 479 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 RPS19P39019 145 aaKnown RBP8.32□□□□□ -1.08
NUP54-203ENST00000504173 TMBIM6P55061 237 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 LCN2P80188 198 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 DEFA6Q01524 100 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 PDCD1Q15116 288 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 TAF9Q16594 264 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 C2orf76Q3KRA6 126 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 NHLRC3Q5JS37 347 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 IDNKQ5T6J7 187 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 CYB5R2Q6BCY4 276 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 OR10K2Q6IF99 312 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 ZNF841Q6ZN19 808 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 USP43Q70EL4 1123 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms