RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 POU3F4P49335 361 aa12.33□□□□□ -0.44
PDLIM7-210ENST00000503827 HMGA2P52926 109 aa12.33□□□□□ -0.44
PDLIM7-210ENST00000503827 HACD2Q6Y1H2 254 aa12.33□□□□□ -0.44
PDLIM7-210ENST00000503827 AQP11Q8NBQ7 271 aa12.33□□□□□ -0.44
PDLIM7-210ENST00000503827 CADM1Q9BY67 442 aaKnown RBP12.33□□□□□ -0.44
PDLIM7-210ENST00000503827 NUFIP1Q9UHK0 495 aaKnown RBP12.33□□□□□ -0.44
PDLIM7-210ENST00000503827 RRP9O43818 475 aaKnown RBP12.32□□□□□ -0.44
PDLIM7-210ENST00000503827 SAP30O75446 220 aa12.32□□□□□ -0.44
PDLIM7-210ENST00000503827 CCNB2O95067 398 aa12.32□□□□□ -0.44
PDLIM7-210ENST00000503827 IGKV1D-33P01593 117 aa12.32□□□□□ -0.44
PDLIM7-210ENST00000503827 IGKV1-33P01594 117 aa12.32□□□□□ -0.44
PDLIM7-210ENST00000503827 PTGFRP43088 359 aa12.32□□□□□ -0.44
PDLIM7-210ENST00000503827 GPR12P47775 334 aa12.32□□□□□ -0.44
PDLIM7-210ENST00000503827 OR3A1P47881 315 aa12.32□□□□□ -0.44
PDLIM7-210ENST00000503827 ZNF91Q05481 1191 aa12.32□□□□□ -0.44
PDLIM7-210ENST00000503827 SRSF7Q16629 238 aaKnown RBP eCLIP12.32□□□□□ -0.44
PDLIM7-210ENST00000503827 ZNF829Q3KNS6 432 aaPredicted RBP12.32□□□□□ -0.44
PDLIM7-210ENST00000503827 OR1N2Q8NGR9 330 aa12.32□□□□□ -0.44
PDLIM7-210ENST00000503827 OR9G1Q8NH87 305 aa12.32□□□□□ -0.44
PDLIM7-210ENST00000503827 IL17DQ8TAD2 202 aa12.32□□□□□ -0.44
PDLIM7-210ENST00000503827 CCDC134Q9H6E4 229 aa12.32□□□□□ -0.44
PDLIM7-210ENST00000503827 U3KQV3 271 aa12.32□□□□□ -0.44
PDLIM7-210ENST00000503827 V9GYS6 101 aa12.32□□□□□ -0.44
PDLIM7-210ENST00000503827 A0A1W2PPI3 338 aa12.31□□□□□ -0.44
PDLIM7-210ENST00000503827 A6NIN4 97 aa12.31□□□□□ -0.44
PDLIM7-210ENST00000503827 PRR23D1E9PI22 279 aaPredicted RBP12.31□□□□□ -0.44
PDLIM7-210ENST00000503827 OVOL1O14753 267 aa12.31□□□□□ -0.44
PDLIM7-210ENST00000503827 E2F6O75461 281 aa12.31□□□□□ -0.44
PDLIM7-210ENST00000503827 TTRP02766 147 aa12.31□□□□□ -0.44
PDLIM7-210ENST00000503827 PRR23D2P0DMB1 279 aaPredicted RBP12.31□□□□□ -0.44
PDLIM7-210ENST00000503827 NFYBP25208 207 aa12.31□□□□□ -0.44
PDLIM7-210ENST00000503827 DUSP1P28562 367 aa12.31□□□□□ -0.44
PDLIM7-210ENST00000503827 RAB7AP51149 207 aa12.31□□□□□ -0.44
PDLIM7-210ENST00000503827 PSME3P61289 254 aa12.31□□□□□ -0.44
PDLIM7-210ENST00000503827 ZNF616Q08AN1 781 aa12.31□□□□□ -0.44
PDLIM7-210ENST00000503827 SLC25A26Q70HW3 274 aa12.31□□□□□ -0.44
PDLIM7-210ENST00000503827 Q8IYB0 196 aa12.31□□□□□ -0.44
PDLIM7-210ENST00000503827 OR6Q1Q8NGQ2 317 aa12.31□□□□□ -0.44
PDLIM7-210ENST00000503827 TEX47Q8TBZ9 253 aa12.31□□□□□ -0.44
PDLIM7-210ENST00000503827 SPATA25Q9BR10 227 aa12.31□□□□□ -0.44
PDLIM7-210ENST00000503827 ABCG5Q9H222 651 aa12.31□□□□□ -0.44
PDLIM7-210ENST00000503827 LIN7CQ9NUP9 197 aaKnown RBP12.31□□□□□ -0.44
PDLIM7-210ENST00000503827 IL36RNQ9UBH0 155 aa12.31□□□□□ -0.44
PDLIM7-210ENST00000503827 GTF2A1LQ9UNN4 478 aa12.31□□□□□ -0.44
PDLIM7-210ENST00000503827 NCBP2LA6PVI3 153 aaKnown RBP12.3□□□□□ -0.44
PDLIM7-210ENST00000503827 ZNF254O75437 659 aa12.3□□□□□ -0.44
PDLIM7-210ENST00000503827 IGHG4P01861 327 aa12.3□□□□□ -0.44
PDLIM7-210ENST00000503827 IFNA6P05013 189 aa12.3□□□□□ -0.44
PDLIM7-210ENST00000503827 IGHV4-30-4P0DP06 118 aa12.3□□□□□ -0.44
PDLIM7-210ENST00000503827 VDAC1P21796 283 aa12.3□□□□□ -0.44
PDLIM7-210ENST00000503827 HCCSP53701 268 aa12.3□□□□□ -0.44
PDLIM7-210ENST00000503827 CDC42P60953 191 aa12.3□□□□□ -0.44
PDLIM7-210ENST00000503827 ZNF146Q15072 292 aa12.3□□□□□ -0.44
PDLIM7-210ENST00000503827 TGIF2LXQ8IUE1 241 aa12.3□□□□□ -0.44
PDLIM7-210ENST00000503827 OR8H3Q8N146 312 aa12.3□□□□□ -0.44
PDLIM7-210ENST00000503827 OR14K1Q8NGZ2 314 aa12.3□□□□□ -0.44
PDLIM7-210ENST00000503827 MAGEL2Q9UJ55 1249 aa12.3□□□□□ -0.44
PDLIM7-210ENST00000503827 ZNF729A6NN14 1252 aaPredicted RBP12.29□□□□□ -0.44
PDLIM7-210ENST00000503827 DHRS7CA6NNS2 312 aa12.29□□□□□ -0.44
PDLIM7-210ENST00000503827 SIRPB1O00241 398 aa12.29□□□□□ -0.44
PDLIM7-210ENST00000503827 PRODHO43272 600 aa12.29□□□□□ -0.44
PDLIM7-210ENST00000503827 GLIPR1P48060 266 aa12.29□□□□□ -0.44
PDLIM7-210ENST00000503827 RIDAP52758 137 aaKnown RBP12.29□□□□□ -0.44
PDLIM7-210ENST00000503827 RPS7P62081 194 aaKnown RBP12.29□□□□□ -0.44
PDLIM7-210ENST00000503827 GABPB1Q06547 395 aaPredicted RBP12.29□□□□□ -0.44
PDLIM7-210ENST00000503827 AESQ08117 197 aa12.29□□□□□ -0.44
PDLIM7-210ENST00000503827 MFGE8Q08431 387 aaPredicted RBP12.29□□□□□ -0.44
PDLIM7-210ENST00000503827 MADCAM1Q13477 382 aa12.29□□□□□ -0.44
PDLIM7-210ENST00000503827 ASPHD1Q5U4P2 390 aa12.29□□□□□ -0.44
PDLIM7-210ENST00000503827 ZNF679Q8IYX0 411 aa12.29□□□□□ -0.44
PDLIM7-210ENST00000503827 FAM58AQ8N1B3 248 aa12.29□□□□□ -0.44
PDLIM7-210ENST00000503827 FAM71E2Q8N5Q1 922 aa12.29□□□□□ -0.44
PDLIM7-210ENST00000503827 IQCF1Q8N6M8 205 aa12.29□□□□□ -0.44
PDLIM7-210ENST00000503827 DCUN1D4Q92564 292 aa12.29□□□□□ -0.44
PDLIM7-210ENST00000503827 ST6GALNAC6Q969X2 333 aa12.29□□□□□ -0.44
PDLIM7-210ENST00000503827 YIPF3Q9GZM5 350 aa12.29□□□□□ -0.44
PDLIM7-210ENST00000503827 GHITMQ9H3K2 345 aa12.29□□□□□ -0.44
PDLIM7-210ENST00000503827 SPAG4Q9NPE6 437 aa12.29□□□□□ -0.44
PDLIM7-210ENST00000503827 CHCHD3Q9NX63 227 aaKnown RBP12.29□□□□□ -0.44
PDLIM7-210ENST00000503827 IGKV1-27A0A075B6S5 117 aa12.28□□□□□ -0.44
PDLIM7-210ENST00000503827 H3BN98 237 aa12.28□□□□□ -0.44
PDLIM7-210ENST00000503827 J3QR06 171 aa12.28□□□□□ -0.44
PDLIM7-210ENST00000503827 MPZL2O60487 215 aa12.28□□□□□ -0.44
PDLIM7-210ENST00000503827 PSMB8P28062 276 aa12.28□□□□□ -0.44
PDLIM7-210ENST00000503827 FUT6P51993 359 aa12.28□□□□□ -0.44
PDLIM7-210ENST00000503827 SNU13P55769 128 aaKnown RBP12.28□□□□□ -0.44
PDLIM7-210ENST00000503827 CFHR3Q02985 330 aa12.28□□□□□ -0.44
PDLIM7-210ENST00000503827 SPIN3Q5JUX0 258 aa12.28□□□□□ -0.44
PDLIM7-210ENST00000503827 SLC35D3Q5M8T2 416 aa12.28□□□□□ -0.44
PDLIM7-210ENST00000503827 UTF1Q5T230 341 aa12.28□□□□□ -0.44
PDLIM7-210ENST00000503827 UBE2E2Q96LR5 201 aa12.28□□□□□ -0.44
PDLIM7-210ENST00000503827 NSMCE2Q96MF7 247 aa12.28□□□□□ -0.44
PDLIM7-210ENST00000503827 DGCR6LQ9BY27 220 aa12.28□□□□□ -0.44
PDLIM7-210ENST00000503827 MOB1AQ9H8S9 216 aa12.28□□□□□ -0.44
PDLIM7-210ENST00000503827 C19orf73Q9NVV2 129 aa12.28□□□□□ -0.44
PDLIM7-210ENST00000503827 RBFOX1Q9NWB1 397 aaKnown RBP12.28□□□□□ -0.44
PDLIM7-210ENST00000503827 IKZF2Q9UKS7 526 aa12.28□□□□□ -0.44
PDLIM7-210ENST00000503827 HERC2O95714 4834 aa12.28□□□□□ -0.44
PDLIM7-210ENST00000503827 TRBV2A0A0J9YWF9 115 aa12.27□□□□□ -0.45
PDLIM7-210ENST00000503827 A0A1B0GTI1 187 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms