RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 PGLYRP3Q96LB9 341 aa12.82□□□□□ -0.36
DDR1-250ENST00000503628 WWC2-AS2Q96NR7 200 aa12.82□□□□□ -0.36
DDR1-250ENST00000503628 OR4F4Q96R69 305 aa12.82□□□□□ -0.36
DDR1-250ENST00000503628 OR5M11Q96RB7 305 aa12.82□□□□□ -0.36
DDR1-250ENST00000503628 PNMA8CA0A1B0GUJ8 204 aa12.81□□□□□ -0.36
DDR1-250ENST00000503628 FAM230AA0A1W2PPH8 454 aa12.81□□□□□ -0.36
DDR1-250ENST00000503628 ADARB2-AS1A8MUL3 147 aa12.81□□□□□ -0.36
DDR1-250ENST00000503628 NDUFB3O43676 98 aa12.81□□□□□ -0.36
DDR1-250ENST00000503628 MUC1P15941 1255 aaPredicted RBP12.81□□□□□ -0.36
DDR1-250ENST00000503628 ATF1P18846 271 aa12.81□□□□□ -0.36
DDR1-250ENST00000503628 PAX6P26367 422 aa12.81□□□□□ -0.36
DDR1-250ENST00000503628 HAAOP46952 286 aa12.81□□□□□ -0.36
DDR1-250ENST00000503628 FUT6P51993 359 aa12.81□□□□□ -0.36
DDR1-250ENST00000503628 GABARAPL2P60520 117 aa12.81□□□□□ -0.36
DDR1-250ENST00000503628 SPHARQ15513 63 aa12.81□□□□□ -0.36
DDR1-250ENST00000503628 MED22Q15528 200 aa12.81□□□□□ -0.36
DDR1-250ENST00000503628 HAGHLQ6PII5 290 aaPredicted RBP12.81□□□□□ -0.36
DDR1-250ENST00000503628 SLC36A1Q7Z2H8 476 aa12.81□□□□□ -0.36
DDR1-250ENST00000503628 NDUFA11Q86Y39 141 aa12.81□□□□□ -0.36
DDR1-250ENST00000503628 SERPINA12Q8IW75 414 aa12.81□□□□□ -0.36
DDR1-250ENST00000503628 PARP16Q8N5Y8 322 aa12.81□□□□□ -0.36
DDR1-250ENST00000503628 C8orf46Q8TAG6 207 aa12.81□□□□□ -0.36
DDR1-250ENST00000503628 H1FXQ92522 213 aaKnown RBP12.81□□□□□ -0.36
DDR1-250ENST00000503628 YTHDF1Q9BYJ9 559 aaKnown RBP12.81□□□□□ -0.36
DDR1-250ENST00000503628 RAB18Q9NP72 206 aa12.81□□□□□ -0.36
DDR1-250ENST00000503628 IGKV1-9A0A0C4DH69 117 aa12.8□□□□□ -0.36
DDR1-250ENST00000503628 MEGF11A6BM72 1044 aa12.8□□□□□ -0.36
DDR1-250ENST00000503628 J3QT63 122 aa12.8□□□□□ -0.36
DDR1-250ENST00000503628 RHBDL1O75783 438 aa12.8□□□□□ -0.36
DDR1-250ENST00000503628 CD1AP06126 327 aa12.8□□□□□ -0.36
DDR1-250ENST00000503628 OCM2P0CE71 109 aa12.8□□□□□ -0.36
DDR1-250ENST00000503628 SELLP14151 372 aa12.8□□□□□ -0.36
DDR1-250ENST00000503628 CELP19835 753 aa12.8□□□□□ -0.36
DDR1-250ENST00000503628 AMY2BP19961 511 aa12.8□□□□□ -0.36
DDR1-250ENST00000503628 CD33P20138 364 aa12.8□□□□□ -0.36
DDR1-250ENST00000503628 PRKACBP22694 351 aa12.8□□□□□ -0.36
DDR1-250ENST00000503628 SOX2P48431 317 aa12.8□□□□□ -0.36
DDR1-250ENST00000503628 HABP2Q14520 560 aaPredicted RBP12.8□□□□□ -0.36
DDR1-250ENST00000503628 YIF1BQ5BJH7 314 aa12.8□□□□□ -0.36
DDR1-250ENST00000503628 NCR3LG1Q68D85 454 aa12.8□□□□□ -0.36
DDR1-250ENST00000503628 DNAAF1Q8NEP3 725 aa12.8□□□□□ -0.36
DDR1-250ENST00000503628 OR5T2Q8NGG2 359 aa12.8□□□□□ -0.36
DDR1-250ENST00000503628 OR5D14Q8NGL3 314 aa12.8□□□□□ -0.36
DDR1-250ENST00000503628 ZNF671Q8TAW3 534 aa12.8□□□□□ -0.36
DDR1-250ENST00000503628 AQP3Q92482 292 aa12.8□□□□□ -0.36
DDR1-250ENST00000503628 BORCS8Q96FH0 119 aa12.8□□□□□ -0.36
DDR1-250ENST00000503628 AJUBAQ96IF1 538 aa12.8□□□□□ -0.36
DDR1-250ENST00000503628 NKX3-1Q99801 234 aaPredicted RBP12.8□□□□□ -0.36
DDR1-250ENST00000503628 CITED2Q99967 270 aaPredicted RBP12.8□□□□□ -0.36
DDR1-250ENST00000503628 NPFFR1Q9GZQ6 430 aa12.8□□□□□ -0.36
DDR1-250ENST00000503628 MEGF9Q9H1U4 602 aa12.8□□□□□ -0.36
DDR1-250ENST00000503628 ZCCHC4Q9H5U6 513 aa12.8□□□□□ -0.36
DDR1-250ENST00000503628 SERTAD4Q9NUC0 356 aa12.8□□□□□ -0.36
DDR1-250ENST00000503628 IGKV1-27A0A075B6S5 117 aa12.79□□□□□ -0.36
DDR1-250ENST00000503628 TRBV5-5A0A0J9YX44 114 aa12.79□□□□□ -0.36
DDR1-250ENST00000503628 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.79□□□□□ -0.36
DDR1-250ENST00000503628 AKR7A2O43488 359 aa12.79□□□□□ -0.36
DDR1-250ENST00000503628 CHST1O43916 411 aa12.79□□□□□ -0.36
DDR1-250ENST00000503628 MRPS14O60783 128 aaKnown RBP12.79□□□□□ -0.36
DDR1-250ENST00000503628 CD2P06729 351 aa12.79□□□□□ -0.36
DDR1-250ENST00000503628 MPZP25189 248 aa12.79□□□□□ -0.36
DDR1-250ENST00000503628 AZGP1P25311 298 aaKnown RBP12.79□□□□□ -0.36
DDR1-250ENST00000503628 MAP2K4P45985 399 aa12.79□□□□□ -0.36
DDR1-250ENST00000503628 RPS11P62280 158 aaKnown RBP eCLIP12.79□□□□□ -0.36
DDR1-250ENST00000503628 TBCEQ15813 527 aaPredicted RBP12.79□□□□□ -0.36
DDR1-250ENST00000503628 LRRC75BQ2VPJ9 315 aa12.79□□□□□ -0.36
DDR1-250ENST00000503628 LRRC10Q5BKY1 277 aa12.79□□□□□ -0.36
DDR1-250ENST00000503628 HCP5Q6MZN7 132 aa12.79□□□□□ -0.36
DDR1-250ENST00000503628 ANGPTL5Q86XS5 388 aa12.79□□□□□ -0.36
DDR1-250ENST00000503628 WFDC9Q8NEX5 89 aa12.79□□□□□ -0.36
DDR1-250ENST00000503628 OR13C5Q8NGS8 318 aa12.79□□□□□ -0.36
DDR1-250ENST00000503628 OR13C9Q8NGT0 318 aa12.79□□□□□ -0.36
DDR1-250ENST00000503628 TMEM106AQ96A25 262 aa12.79□□□□□ -0.36
DDR1-250ENST00000503628 SPSB1Q96BD6 273 aa12.79□□□□□ -0.36
DDR1-250ENST00000503628 PKIBQ9C010 78 aa12.79□□□□□ -0.36
DDR1-250ENST00000503628 METTL8Q9H825 291 aaKnown RBP12.79□□□□□ -0.36
DDR1-250ENST00000503628 NEK6Q9HC98 313 aa12.79□□□□□ -0.36
DDR1-250ENST00000503628 POLDIP2Q9Y2S7 368 aa12.79□□□□□ -0.36
DDR1-250ENST00000503628 WI2-2373I1.2A0A1W2PRP0 233 aa12.78□□□□□ -0.36
DDR1-250ENST00000503628 M0R1W7 72 aa12.78□□□□□ -0.36
DDR1-250ENST00000503628 SULT1B1O43704 296 aa12.78□□□□□ -0.36
DDR1-250ENST00000503628 SYNGR1O43759 233 aa12.78□□□□□ -0.36
DDR1-250ENST00000503628 OCMP0CE72 109 aaPredicted RBP12.78□□□□□ -0.36
DDR1-250ENST00000503628 RBP2P50120 134 aa12.78□□□□□ -0.36
DDR1-250ENST00000503628 ATP1B3P54709 279 aa12.78□□□□□ -0.36
DDR1-250ENST00000503628 Q499Y3 187 aa12.78□□□□□ -0.36
DDR1-250ENST00000503628 LHFPL2Q6ZUX7 228 aa12.78□□□□□ -0.36
DDR1-250ENST00000503628 CALHM1Q8IU99 346 aa12.78□□□□□ -0.36
DDR1-250ENST00000503628 DTX3Q8N9I9 347 aa12.78□□□□□ -0.36
DDR1-250ENST00000503628 OPALINQ96PE5 141 aa12.78□□□□□ -0.36
DDR1-250ENST00000503628 WDR13Q9H1Z4 485 aa12.78□□□□□ -0.36
DDR1-250ENST00000503628 ZNF702PQ9H963 129 aa12.78□□□□□ -0.36
DDR1-250ENST00000503628 ISYNA1Q9NPH2 558 aa12.78□□□□□ -0.36
DDR1-250ENST00000503628 SF3B6Q9Y3B4 125 aaKnown RBP12.78□□□□□ -0.36
DDR1-250ENST00000503628 NOS1APO75052 506 aaPredicted RBP12.77□□□□□ -0.37
DDR1-250ENST00000503628 HSMCR30P0CW71 290 aa12.77□□□□□ -0.37
DDR1-250ENST00000503628 PGA5P0DJD9 388 aa12.77□□□□□ -0.37
DDR1-250ENST00000503628 GLRA1P23415 457 aa12.77□□□□□ -0.37
DDR1-250ENST00000503628 BMXP51813 675 aa12.77□□□□□ -0.37
DDR1-250ENST00000503628 MTCP1P56278 107 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms