RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 ZNF665Q9H7R5 613 aa15.57■□□□□ 0.08
MCF2L-230ENST00000491028 KAAG1Q9UBP8 84 aa15.57■□□□□ 0.08
MCF2L-230ENST00000491028 A0A0A6YYD4 124 aa15.56■□□□□ 0.08
MCF2L-230ENST00000491028 VWC2LB2RUY7 222 aa15.56■□□□□ 0.08
MCF2L-230ENST00000491028 CTDSP2O14595 271 aa15.56■□□□□ 0.08
MCF2L-230ENST00000491028 TNFRSF13BO14836 293 aaPredicted RBP15.56■□□□□ 0.08
MCF2L-230ENST00000491028 DEGS1O15121 323 aa15.56■□□□□ 0.08
MCF2L-230ENST00000491028 OR2H2O95918 312 aa15.56■□□□□ 0.08
MCF2L-230ENST00000491028 EIF4EP06730 217 aaKnown RBP15.56■□□□□ 0.08
MCF2L-230ENST00000491028 SLC25A16P16260 332 aa15.56■□□□□ 0.08
MCF2L-230ENST00000491028 LMO1P25800 156 aa15.56■□□□□ 0.08
MCF2L-230ENST00000491028 S100A5P33763 92 aa15.56■□□□□ 0.08
MCF2L-230ENST00000491028 GABRA2P47869 451 aa15.56■□□□□ 0.08
MCF2L-230ENST00000491028 VEGFCP49767 419 aa15.56■□□□□ 0.08
MCF2L-230ENST00000491028 SLC36A1Q7Z2H8 476 aa15.56■□□□□ 0.08
MCF2L-230ENST00000491028 BIVMQ86UB2 503 aa15.56■□□□□ 0.08
MCF2L-230ENST00000491028 LAX1Q8IWV1 398 aa15.56■□□□□ 0.08
MCF2L-230ENST00000491028 CMTM4Q8IZR5 234 aa15.56■□□□□ 0.08
MCF2L-230ENST00000491028 ZNF561Q8N587 486 aa15.56■□□□□ 0.08
MCF2L-230ENST00000491028 CD177Q8N6Q3 437 aa15.56■□□□□ 0.08
MCF2L-230ENST00000491028 S100A16Q96FQ6 103 aaKnown RBP15.56■□□□□ 0.08
MCF2L-230ENST00000491028 WDFY2Q96P53 400 aa15.56■□□□□ 0.08
MCF2L-230ENST00000491028 MIXL1Q9H2W2 232 aa15.56■□□□□ 0.08
MCF2L-230ENST00000491028 DIABLOQ9NR28 239 aa15.56■□□□□ 0.08
MCF2L-230ENST00000491028 RCC2Q9P258 522 aaKnown RBP15.56■□□□□ 0.08
MCF2L-230ENST00000491028 FOXI3A8MTJ6 420 aaPredicted RBP15.55■□□□□ 0.08
MCF2L-230ENST00000491028 FAM25AB3EWG3 89 aa15.55■□□□□ 0.08
MCF2L-230ENST00000491028 FAM25CB3EWG5 89 aa15.55■□□□□ 0.08
MCF2L-230ENST00000491028 FAM25GB3EWG6 89 aa15.55■□□□□ 0.08
MCF2L-230ENST00000491028 RAB27BO00194 218 aa15.55■□□□□ 0.08
MCF2L-230ENST00000491028 SIGLEC5O15389 551 aa15.55■□□□□ 0.08
MCF2L-230ENST00000491028 PDCD6O75340 191 aa15.55■□□□□ 0.08
MCF2L-230ENST00000491028 GLAP06280 429 aa15.55■□□□□ 0.08
MCF2L-230ENST00000491028 ELK1P19419 428 aa15.55■□□□□ 0.08
MCF2L-230ENST00000491028 BLVRBP30043 206 aaPredicted RBP15.55■□□□□ 0.08
MCF2L-230ENST00000491028 NR4A2P43354 598 aa15.55■□□□□ 0.08
MCF2L-230ENST00000491028 CEBPDP49716 269 aaPredicted RBP15.55■□□□□ 0.08
MCF2L-230ENST00000491028 IL13RA1P78552 427 aa15.55■□□□□ 0.08
MCF2L-230ENST00000491028 COL10A1Q03692 680 aa15.55■□□□□ 0.08
MCF2L-230ENST00000491028 ARL6IP1Q15041 203 aa15.55■□□□□ 0.08
MCF2L-230ENST00000491028 Q5PR19 223 aa15.55■□□□□ 0.08
MCF2L-230ENST00000491028 SHEQ5VZ18 495 aa15.55■□□□□ 0.08
MCF2L-230ENST00000491028 OR10R2Q8NGX6 335 aa15.55■□□□□ 0.08
MCF2L-230ENST00000491028 MED30Q96HR3 178 aa15.55■□□□□ 0.08
MCF2L-230ENST00000491028 GAFA1Q96PS6 74 aa15.55■□□□□ 0.08
MCF2L-230ENST00000491028 NEDD4LQ96PU5 975 aa15.55■□□□□ 0.08
MCF2L-230ENST00000491028 FOXC2Q99958 501 aa15.55■□□□□ 0.08
MCF2L-230ENST00000491028 MIOXQ9UGB7 285 aa15.55■□□□□ 0.08
MCF2L-230ENST00000491028 HSF4Q9ULV5 492 aa15.55■□□□□ 0.08
MCF2L-230ENST00000491028 ARID1AO14497 2285 aa15.55■□□□□ 0.08
MCF2L-230ENST00000491028 CEACAM18A8MTB9 384 aa15.54■□□□□ 0.08
MCF2L-230ENST00000491028 SIRPB1O00241 398 aa15.54■□□□□ 0.08
MCF2L-230ENST00000491028 SLC33A1O00400 549 aaPredicted RBP15.54■□□□□ 0.08
MCF2L-230ENST00000491028 SOCS1O15524 211 aa15.54■□□□□ 0.08
MCF2L-230ENST00000491028 AMY2BP19961 511 aa15.54■□□□□ 0.08
MCF2L-230ENST00000491028 FUT3P21217 361 aa15.54■□□□□ 0.08
MCF2L-230ENST00000491028 CHATP28329 748 aa15.54■□□□□ 0.08
MCF2L-230ENST00000491028 TALDO1P37837 337 aa15.54■□□□□ 0.08
MCF2L-230ENST00000491028 SCN1BQ07699 218 aa15.54■□□□□ 0.08
MCF2L-230ENST00000491028 PDCD1Q15116 288 aa15.54■□□□□ 0.08
MCF2L-230ENST00000491028 ATAD3CQ5T2N8 411 aa15.54■□□□□ 0.08
MCF2L-230ENST00000491028 SIGIRRQ6IA17 410 aa15.54■□□□□ 0.08
MCF2L-230ENST00000491028 LINC00299Q6ZSB3 139 aa15.54■□□□□ 0.08
MCF2L-230ENST00000491028 OR6Q1Q8NGQ2 317 aa15.54■□□□□ 0.08
MCF2L-230ENST00000491028 PPP1R35Q8TAP8 253 aa15.54■□□□□ 0.08
MCF2L-230ENST00000491028 CCL13Q99616 98 aa15.54■□□□□ 0.08
MCF2L-230ENST00000491028 NBPF19A0A087WUL8 3843 aa15.54■□□□□ 0.08
MCF2L-230ENST00000491028 IGHV4-30-2A0A087WSY4 118 aa15.53■□□□□ 0.08
MCF2L-230ENST00000491028 TRAV24A0A0B4J272 114 aa15.53■□□□□ 0.08
MCF2L-230ENST00000491028 TMPRSS2O15393 492 aa15.53■□□□□ 0.08
MCF2L-230ENST00000491028 ADAM20O43506 726 aa15.53■□□□□ 0.08
MCF2L-230ENST00000491028 XRCC3O43542 346 aa15.53■□□□□ 0.08
MCF2L-230ENST00000491028 ZNF737O75373 536 aa15.53■□□□□ 0.08
MCF2L-230ENST00000491028 RPS2P15880 293 aaKnown RBP15.53■□□□□ 0.08
MCF2L-230ENST00000491028 KCNJ3P48549 501 aa15.53■□□□□ 0.08
MCF2L-230ENST00000491028 RBM39Q14498 530 aaKnown RBP15.53■□□□□ 0.08
MCF2L-230ENST00000491028 MOGAT2Q3SYC2 334 aa15.53■□□□□ 0.08
MCF2L-230ENST00000491028 NLRC3Q7RTR2 1065 aa15.53■□□□□ 0.08
MCF2L-230ENST00000491028 ASCC1Q8N9N2 400 aaKnown RBP15.53■□□□□ 0.08
MCF2L-230ENST00000491028 RAB3CQ96E17 227 aa15.53■□□□□ 0.08
MCF2L-230ENST00000491028 NEIL1Q96FI4 390 aaPredicted RBP15.53■□□□□ 0.08
MCF2L-230ENST00000491028 SNX22Q96L94 193 aa15.53■□□□□ 0.08
MCF2L-230ENST00000491028 FAM234AQ9H0X4 552 aa15.53■□□□□ 0.08
MCF2L-230ENST00000491028 PATZ1Q9HBE1 687 aaKnown RBP15.53■□□□□ 0.08
MCF2L-230ENST00000491028 ZNF581Q9P0T4 197 aa15.53■□□□□ 0.08
MCF2L-230ENST00000491028 METRNQ9UJH8 293 aa15.53■□□□□ 0.08
MCF2L-230ENST00000491028 PCDHB10Q9UN67 800 aa15.53■□□□□ 0.08
MCF2L-230ENST00000491028 MAB21L2Q9Y586 359 aa15.53■□□□□ 0.08
MCF2L-230ENST00000491028 POLQO75417 2590 aa15.53■□□□□ 0.08
MCF2L-230ENST00000491028 MCRIP1C9JLW8 97 aa15.52■□□□□ 0.08
MCF2L-230ENST00000491028 F5H0A9 414 aaPredicted RBP15.52■□□□□ 0.08
MCF2L-230ENST00000491028 TPPPO94811 219 aa15.52■□□□□ 0.08
MCF2L-230ENST00000491028 TFF1P04155 84 aa15.52■□□□□ 0.08
MCF2L-230ENST00000491028 CSN2P05814 226 aa15.52■□□□□ 0.08
MCF2L-230ENST00000491028 CDK2P24941 298 aa15.52■□□□□ 0.08
MCF2L-230ENST00000491028 TMEM50BP56557 158 aa15.52■□□□□ 0.08
MCF2L-230ENST00000491028 PAN3Q58A45 887 aaKnown RBP15.52■□□□□ 0.08
MCF2L-230ENST00000491028 NKAPLQ5M9Q1 402 aa15.52■□□□□ 0.08
MCF2L-230ENST00000491028 LYPD2Q6UXB3 125 aa15.52■□□□□ 0.08
MCF2L-230ENST00000491028 BAIAP2L2Q6UXY1 529 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms