RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 METTL21EPA6NDL7 271 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 RFPL4AA6NLU0 287 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 RFPL4AL1F8VTS6 287 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 NR4A2P43354 598 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 KCNJ8Q15842 424 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 KRTAP1-3Q8IUG1 177 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 MUC20Q8N307 709 aaPredicted RBP11.91□□□□□ -0.5
CLDN11-209ENST00000489485 WFDC11Q8NEX6 87 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 MRPS24Q96EL2 167 aaKnown RBP11.91□□□□□ -0.5
CLDN11-209ENST00000489485 Q96M66 194 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 CMTM3Q96MX0 182 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 TMEM246Q9BRR3 403 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 URM1Q9BTM9 101 aaKnown RBP11.91□□□□□ -0.5
CLDN11-209ENST00000489485 ABCG5Q9H222 651 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 PCDHB10Q9UN67 800 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 A0A0A6YYD4 124 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 TFF1P04155 84 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 PSG2P11465 335 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 SLC25A16P16260 332 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 CD40LGP29965 261 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 GABRA2P47869 451 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 PITPNBP48739 271 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 RBM11P57052 281 aaKnown RBP11.91□□□□□ -0.5
CLDN11-209ENST00000489485 MOGAT2Q3SYC2 334 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 CNIH2Q6PI25 160 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 IZUMO1Q8IYV9 350 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 RAB40AQ8WXH6 277 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 PHF21AQ96BD5 680 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 ZNF581Q9P0T4 197 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 EXTL2Q9UBQ6 330 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 ADAM30Q9UKF2 790 aa11.91□□□□□ -0.5
CLDN11-209ENST00000489485 PAIP2BQ9ULR5 123 aaKnown RBP11.91□□□□□ -0.5
CLDN11-209ENST00000489485 MED13LQ71F56 2210 aa11.9□□□□□ -0.5
CLDN11-209ENST00000489485 VWC2LB2RUY7 222 aa11.9□□□□□ -0.5
CLDN11-209ENST00000489485 TMPRSS2O15393 492 aa11.9□□□□□ -0.5
CLDN11-209ENST00000489485 SOCS1O15524 211 aa11.9□□□□□ -0.5
CLDN11-209ENST00000489485 OR7C1O76099 320 aaPredicted RBP11.9□□□□□ -0.5
CLDN11-209ENST00000489485 KNG1P01042 644 aa11.9□□□□□ -0.5
CLDN11-209ENST00000489485 CPT2P23786 658 aa11.9□□□□□ -0.5
CLDN11-209ENST00000489485 CDK2P24941 298 aa11.9□□□□□ -0.5
CLDN11-209ENST00000489485 CEBPDP49716 269 aaPredicted RBP11.9□□□□□ -0.5
CLDN11-209ENST00000489485 SCN1BQ07699 218 aa11.9□□□□□ -0.5
CLDN11-209ENST00000489485 SPICQ8N5J4 248 aa11.9□□□□□ -0.5
CLDN11-209ENST00000489485 OR4M1Q8NGD0 313 aa11.9□□□□□ -0.5
CLDN11-209ENST00000489485 ANGPTL6Q8NI99 470 aa11.9□□□□□ -0.5
CLDN11-209ENST00000489485 WDFY2Q96P53 400 aa11.9□□□□□ -0.5
CLDN11-209ENST00000489485 DOCK11Q5JSL3 2073 aa11.9□□□□□ -0.5
CLDN11-209ENST00000489485 IGKV1D-17A0A075B6S4 117 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 RAB27BO00194 218 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 FSTL3O95633 263 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 PRDX2P32119 198 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 TALDO1P37837 337 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 TMEM155Q4W5P6 130 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 SPIN3Q5JUX0 258 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 STUMQ69YW2 141 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 MFSD4AQ8N468 514 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 FAM89BQ8N5H3 189 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 CCL13Q99616 98 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 TM2D1Q9BX74 207 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 ZMAT3Q9HA38 289 aaKnown RBP11.89□□□□□ -0.51
CLDN11-209ENST00000489485 DIABLOQ9NR28 239 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 GLS2Q9UI32 602 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 MRPS7Q9Y2R9 242 aaKnown RBP11.89□□□□□ -0.51
CLDN11-209ENST00000489485 CREBBPQ92793 2442 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 FLNAP21333 2647 aaKnown RBP11.89□□□□□ -0.51
CLDN11-209ENST00000489485 FABP12A6NFH5 140 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 CEACAM18A8MTB9 384 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 RNF223E7ERA6 249 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 ADAM20O43506 726 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 NDUFA2O43678 99 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 ZNF44P15621 663 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 RPS2P15880 293 aaKnown RBP11.89□□□□□ -0.51
CLDN11-209ENST00000489485 BLVRBP30043 206 aaPredicted RBP11.89□□□□□ -0.51
CLDN11-209ENST00000489485 PPP5CP53041 499 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 IKZF1Q13422 519 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 ZNF146Q15072 292 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 FAM189A2Q15884 450 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 NHLRC3Q5JS37 347 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 SPANXN2Q5MJ10 180 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 TMEM69Q5SWH9 247 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 BRICD5Q6PL45 260 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 LYPD2Q6UXB3 125 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 CCDC190Q86UF4 302 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 CHST4Q8NCG5 386 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 OR56B1Q8NGI3 324 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 CYYR1Q96J86 154 aa11.89□□□□□ -0.51
CLDN11-209ENST00000489485 IGHV4-61A0A0C4DH41 118 aa11.88□□□□□ -0.51
CLDN11-209ENST00000489485 CYSRT1A8MQ03 144 aa11.88□□□□□ -0.51
CLDN11-209ENST00000489485 BOLA2-SMG1P6H3BVE0 249 aa11.88□□□□□ -0.51
CLDN11-209ENST00000489485 SH2D1BO14796 132 aa11.88□□□□□ -0.51
CLDN11-209ENST00000489485 HAND1O96004 215 aa11.88□□□□□ -0.51
CLDN11-209ENST00000489485 CHRM2P08172 466 aa11.88□□□□□ -0.51
CLDN11-209ENST00000489485 TMEM50BP56557 158 aa11.88□□□□□ -0.51
CLDN11-209ENST00000489485 CBX3Q13185 183 aa11.88□□□□□ -0.51
CLDN11-209ENST00000489485 IL18Q14116 193 aa11.88□□□□□ -0.51
CLDN11-209ENST00000489485 NKAPLQ5M9Q1 402 aa11.88□□□□□ -0.51
CLDN11-209ENST00000489485 ATAD3CQ5T2N8 411 aa11.88□□□□□ -0.51
CLDN11-209ENST00000489485 SIGIRRQ6IA17 410 aa11.88□□□□□ -0.51
CLDN11-209ENST00000489485 SLC36A1Q7Z2H8 476 aa11.88□□□□□ -0.51
CLDN11-209ENST00000489485 RTN4RL2Q86UN3 420 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms