RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 DPAGT1Q9H3H5 408 aa17.23■□□□□ 0.35
LIME1-207ENST00000489212 HEXA-AS1Q9H8Q6 139 aa17.23■□□□□ 0.35
LIME1-207ENST00000489212 CNOT2Q9NZN8 540 aaKnown RBP17.23■□□□□ 0.35
LIME1-207ENST00000489212 ZNF281Q9Y2X9 895 aa17.23■□□□□ 0.35
LIME1-207ENST00000489212 EFCAB10A6NFE3 127 aa17.22■□□□□ 0.35
LIME1-207ENST00000489212 PAHP00439 452 aa17.22■□□□□ 0.35
LIME1-207ENST00000489212 ZNF728P0DKX0 622 aa17.22■□□□□ 0.35
LIME1-207ENST00000489212 TMEM225BP0DP42 221 aa17.22■□□□□ 0.35
LIME1-207ENST00000489212 RAB3AP20336 220 aa17.22■□□□□ 0.35
LIME1-207ENST00000489212 PAX6P26367 422 aa17.22■□□□□ 0.35
LIME1-207ENST00000489212 MIDNQ504T8 468 aa17.22■□□□□ 0.35
LIME1-207ENST00000489212 KIAA2026Q5HYC2 2103 aa17.22■□□□□ 0.35
LIME1-207ENST00000489212 Q6P435 159 aa17.22■□□□□ 0.35
LIME1-207ENST00000489212 BPIFB6Q8NFQ5 453 aa17.22■□□□□ 0.35
LIME1-207ENST00000489212 GHSRQ92847 366 aa17.22■□□□□ 0.35
LIME1-207ENST00000489212 TMEM106AQ96A25 262 aa17.22■□□□□ 0.35
LIME1-207ENST00000489212 ORAI1Q96D31 301 aa17.22■□□□□ 0.35
LIME1-207ENST00000489212 EXOSC4Q9NPD3 245 aaKnown RBP17.22■□□□□ 0.35
LIME1-207ENST00000489212 PLCXD1Q9NUJ7 323 aa17.22■□□□□ 0.35
LIME1-207ENST00000489212 CHCHD3Q9NX63 227 aaKnown RBP17.22■□□□□ 0.35
LIME1-207ENST00000489212 GLS2Q9UI32 602 aa17.22■□□□□ 0.35
LIME1-207ENST00000489212 hCG_1809904A0A1W2PP81 198 aa17.21■□□□□ 0.35
LIME1-207ENST00000489212 A0A1W2PPE2 198 aa17.21■□□□□ 0.35
LIME1-207ENST00000489212 A0A1W2PR64 198 aa17.21■□□□□ 0.35
LIME1-207ENST00000489212 A0A1W2PRV1 198 aa17.21■□□□□ 0.35
LIME1-207ENST00000489212 GABRPO00591 440 aa17.21■□□□□ 0.35
LIME1-207ENST00000489212 SH2D1BO14796 132 aa17.21■□□□□ 0.35
LIME1-207ENST00000489212 CRYBA1P05813 215 aa17.21■□□□□ 0.35
LIME1-207ENST00000489212 C21orf33P30042 268 aaPredicted RBP17.21■□□□□ 0.35
LIME1-207ENST00000489212 RAG2P55895 527 aa17.21■□□□□ 0.35
LIME1-207ENST00000489212 MEF2CQ06413 473 aaPredicted RBP17.21■□□□□ 0.35
LIME1-207ENST00000489212 GABPB1Q06547 395 aaPredicted RBP17.21■□□□□ 0.35
LIME1-207ENST00000489212 AHSA2Q719I0 299 aa17.21■□□□□ 0.35
LIME1-207ENST00000489212 BEND2Q8NDZ0 799 aa17.21■□□□□ 0.35
LIME1-207ENST00000489212 PGLYRP3Q96LB9 341 aa17.21■□□□□ 0.35
LIME1-207ENST00000489212 VCXQ9H320 206 aa17.21■□□□□ 0.35
LIME1-207ENST00000489212 RHOFQ9HBH0 211 aa17.21■□□□□ 0.35
LIME1-207ENST00000489212 MMP24Q9Y5R2 645 aa17.21■□□□□ 0.35
LIME1-207ENST00000489212 MGAM2Q2M2H8 2515 aa17.2■□□□□ 0.34
LIME1-207ENST00000489212 TRBV5-5A0A0J9YX44 114 aa17.2■□□□□ 0.34
LIME1-207ENST00000489212 hADV38S2A0JD32 116 aa17.2■□□□□ 0.34
LIME1-207ENST00000489212 MGST3O14880 152 aa17.2■□□□□ 0.34
LIME1-207ENST00000489212 NDUFA7O95182 113 aa17.2■□□□□ 0.34
LIME1-207ENST00000489212 CD2P06729 351 aa17.2■□□□□ 0.34
LIME1-207ENST00000489212 LMO1P25800 156 aa17.2■□□□□ 0.34
LIME1-207ENST00000489212 RPS11P62280 158 aaKnown RBP eCLIP17.2■□□□□ 0.34
LIME1-207ENST00000489212 MED21Q13503 144 aa17.2■□□□□ 0.34
LIME1-207ENST00000489212 SATL1Q86VE3 508 aa17.2■□□□□ 0.34
LIME1-207ENST00000489212 ZNF714Q96N38 554 aa17.2■□□□□ 0.34
LIME1-207ENST00000489212 FKBP14Q9NWM8 211 aa17.2■□□□□ 0.34
LIME1-207ENST00000489212 VPREB3Q9UKI3 123 aa17.2■□□□□ 0.34
LIME1-207ENST00000489212 LINC00312Q9Y6C7 94 aa17.2■□□□□ 0.34
LIME1-207ENST00000489212 PKD1L1Q8TDX9 2849 aa17.2■□□□□ 0.34
LIME1-207ENST00000489212 A0A0G2JK05 382 aa17.19■□□□□ 0.34
LIME1-207ENST00000489212 POM121CA8CG34 1229 aa17.19■□□□□ 0.34
LIME1-207ENST00000489212 RBP4P02753 201 aa17.19■□□□□ 0.34
LIME1-207ENST00000489212 IGHV1-8P0DP01 117 aa17.19■□□□□ 0.34
LIME1-207ENST00000489212 ERP29P30040 261 aaKnown RBP17.19■□□□□ 0.34
LIME1-207ENST00000489212 AQP4P55087 323 aa17.19■□□□□ 0.34
LIME1-207ENST00000489212 P2RX3P56373 397 aa17.19■□□□□ 0.34
LIME1-207ENST00000489212 RPL15P61313 204 aaKnown RBP17.19■□□□□ 0.34
LIME1-207ENST00000489212 SCN1BQ07699 218 aa17.19■□□□□ 0.34
LIME1-207ENST00000489212 STX19Q8N4C7 294 aa17.19■□□□□ 0.34
LIME1-207ENST00000489212 PXT1Q8NFP0 134 aa17.19■□□□□ 0.34
LIME1-207ENST00000489212 OR4F5Q8NH21 305 aa17.19■□□□□ 0.34
LIME1-207ENST00000489212 PPP1R35Q8TAP8 253 aa17.19■□□□□ 0.34
LIME1-207ENST00000489212 TNFAIP8L1Q8WVP5 186 aa17.19■□□□□ 0.34
LIME1-207ENST00000489212 GPER1Q99527 375 aa17.19■□□□□ 0.34
LIME1-207ENST00000489212 MEGF9Q9H1U4 602 aa17.19■□□□□ 0.34
LIME1-207ENST00000489212 SLC33A1O00400 549 aaPredicted RBP17.18■□□□□ 0.34
LIME1-207ENST00000489212 MAGEB3O15480 346 aa17.18■□□□□ 0.34
LIME1-207ENST00000489212 ALDOBP05062 364 aa17.18■□□□□ 0.34
LIME1-207ENST00000489212 ZNF44P15621 663 aa17.18■□□□□ 0.34
LIME1-207ENST00000489212 MTNR1BP49286 362 aa17.18■□□□□ 0.34
LIME1-207ENST00000489212 ELP2Q6IA86 826 aa17.18■□□□□ 0.34
LIME1-207ENST00000489212 SHISA2Q6UWI4 295 aa17.18■□□□□ 0.34
LIME1-207ENST00000489212 LHFPL4Q7Z7J7 247 aa17.18■□□□□ 0.34
LIME1-207ENST00000489212 OR10K1Q8NGX5 313 aa17.18■□□□□ 0.34
LIME1-207ENST00000489212 PPA2Q9H2U2 334 aa17.18■□□□□ 0.34
LIME1-207ENST00000489212 PNMA8CA0A1B0GUJ8 204 aa17.17■□□□□ 0.34
LIME1-207ENST00000489212 BTBD17A6NE02 478 aa17.17■□□□□ 0.34
LIME1-207ENST00000489212 ERICH4A6NGS2 130 aa17.17■□□□□ 0.34
LIME1-207ENST00000489212 FAM90A8PA6NJQ4 464 aa17.17■□□□□ 0.34
LIME1-207ENST00000489212 ODF3BA8MYP8 253 aa17.17■□□□□ 0.34
LIME1-207ENST00000489212 H3BUX3 64 aa17.17■□□□□ 0.34
LIME1-207ENST00000489212 MMP23AO75900 390 aa17.17■□□□□ 0.34
LIME1-207ENST00000489212 IGFBP3P17936 291 aaPredicted RBP17.17■□□□□ 0.34
LIME1-207ENST00000489212 OR3A4PP47883 348 aa17.17■□□□□ 0.34
LIME1-207ENST00000489212 GLIPR1P48060 266 aa17.17■□□□□ 0.34
LIME1-207ENST00000489212 AESQ08117 197 aa17.17■□□□□ 0.34
LIME1-207ENST00000489212 YIF1BQ5BJH7 314 aa17.17■□□□□ 0.34
LIME1-207ENST00000489212 LDLRAD2Q5SZI1 272 aa17.17■□□□□ 0.34
LIME1-207ENST00000489212 ASCL4Q6XD76 172 aa17.17■□□□□ 0.34
LIME1-207ENST00000489212 GDPGP1Q6ZNW5 385 aa17.17■□□□□ 0.34
LIME1-207ENST00000489212 DYNAPQ8N1N2 210 aa17.17■□□□□ 0.34
LIME1-207ENST00000489212 OR5R1Q8NH85 324 aa17.17■□□□□ 0.34
LIME1-207ENST00000489212 CPNE2Q96FN4 548 aaPredicted RBP17.17■□□□□ 0.34
LIME1-207ENST00000489212 COQ2Q96H96 371 aa17.17■□□□□ 0.34
LIME1-207ENST00000489212 SSX3Q99909 188 aa17.17■□□□□ 0.34
LIME1-207ENST00000489212 FAM192AQ9GZU8 254 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms