RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 CENPNQ96H22 339 aaPredicted RBP4.81□□□□□ -1.64
CDHR3-213ENST00000488386 PRR25Q96S07 402 aa4.81□□□□□ -1.64
CDHR3-213ENST00000488386 MBOAT4Q96T53 435 aa4.81□□□□□ -1.64
CDHR3-213ENST00000488386 NKX3-1Q99801 234 aaPredicted RBP4.81□□□□□ -1.64
CDHR3-213ENST00000488386 GABARAPL3Q9BY60 117 aa4.81□□□□□ -1.64
CDHR3-213ENST00000488386 PRRG3Q9BZD7 231 aa4.81□□□□□ -1.64
CDHR3-213ENST00000488386 TRIM36Q9NQ86 728 aa4.81□□□□□ -1.64
CDHR3-213ENST00000488386 GNG8Q9UK08 70 aa4.81□□□□□ -1.64
CDHR3-213ENST00000488386 SNX5Q9Y5X3 404 aa4.81□□□□□ -1.64
CDHR3-213ENST00000488386 TMEM14AQ9Y6G1 99 aa4.81□□□□□ -1.64
CDHR3-213ENST00000488386 CMYA5Q8N3K9 4069 aa4.81□□□□□ -1.64
CDHR3-213ENST00000488386 TRRAPQ9Y4A5 3859 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 A0A1B0GVI7 797 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 LOC107986453A0A1B0GWG9 222 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 PQLC2LA1A4F0 135 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 MEIOCA2RUB1 952 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 ANKRD61A6NGH8 418 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 METTL15A6NJ78 407 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 OR5B21A6NL26 309 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 H0YAE9 185 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 CLDN34H7C241 214 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 J3QT63 122 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 NPFFO15130 113 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 SYT7O43581 403 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 RGS10O43665 173 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 ANGPTL7O43827 346 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 ZNF254O75437 659 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 MTRF1O75570 445 aaKnown RBP4.8□□□□□ -1.64
CDHR3-213ENST00000488386 ATP5HO75947 161 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 NXPH2O95156 264 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 ECDO95905 644 aaPredicted RBP4.8□□□□□ -1.64
CDHR3-213ENST00000488386 KRT8P05787 483 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 CRYBA1P05813 215 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 HNRNPCP07910 306 aaKnown RBP eCLIP4.8□□□□□ -1.643e-7■■□□□ 11.6
CDHR3-213ENST00000488386 NHLRC4P0CG21 123 aaPredicted RBP4.8□□□□□ -1.64
CDHR3-213ENST00000488386 PGA5P0DJD9 388 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 FCGR1AP12314 374 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 HOXB6P17509 224 aaKnown RBP4.8□□□□□ -1.64
CDHR3-213ENST00000488386 DUSP1P28562 367 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 SAA4P35542 130 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 IER3P46695 156 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 POU3F4P49335 361 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 RASSF2P50749 326 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 BMXP51813 675 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 OR12D2P58182 307 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 PMS2P11Q13670 270 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 SNCBQ16143 134 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 CLVS2Q5SYC1 327 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 ATPAF1Q5TC12 328 aaPredicted RBP4.8□□□□□ -1.64
CDHR3-213ENST00000488386 TMEM42Q69YG0 159 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 DEGS2Q6QHC5 323 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 Q6ZSV7 163 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 CBR4Q8N4T8 237 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 C8orf46Q8TAG6 207 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 ZNF671Q8TAW3 534 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 ADAT3Q96EY9 351 aaPredicted RBP4.8□□□□□ -1.64
CDHR3-213ENST00000488386 SPACA5Q96QH8 159 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 SLC29A1Q99808 456 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 RBM4BQ9BQ04 359 aaKnown RBP4.8□□□□□ -1.64
CDHR3-213ENST00000488386 CHST6Q9GZX3 395 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 PLEKHA1Q9HB21 404 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 AMBNQ9NP70 447 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 ABCB9Q9NP78 766 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 NOX4Q9NPH5 578 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 MTCH1Q9NZJ7 389 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 ZNRD1Q9P1U0 126 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 WARS2Q9UGM6 360 aaKnown RBP4.8□□□□□ -1.64
CDHR3-213ENST00000488386 SIGLEC9Q9Y336 463 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 FAM96BQ9Y3D0 163 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 KPTNQ9Y664 436 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 COX11Q9Y6N1 276 aa4.8□□□□□ -1.64
CDHR3-213ENST00000488386 IGKV1-9A0A0C4DH69 117 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 FAM172BPA6NC97 362 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 ACOD1A6NK06 481 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 H3BUX3 64 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 J3QLW9 94 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 AP4M1O00189 453 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 DLGAP1O14490 977 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 CLIC3O95833 236 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 ALPLP05186 524 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 OR2T7P0C7T2 308 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 ZNF19P17023 458 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 BCL3P20749 454 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 CCL1P22362 96 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 PRDX2P32119 198 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 NPBWR2P48146 333 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 RAB13P51153 203 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 CAV3P56539 151 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 EDDM3BP56851 147 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 CDC42P60953 191 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 ACTR3P61158 418 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 EDDM3AQ14507 147 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 SMIM21Q3B7S5 101 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 LDLRAD2Q5SZI1 272 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 OLFML2AQ68BL7 652 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 METAP1DQ6UB28 335 aaPredicted RBP4.79□□□□□ -1.64
CDHR3-213ENST00000488386 BAIAP2L2Q6UXY1 529 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 CCDC121Q6ZUS5 278 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 SLC25A26Q70HW3 274 aa4.79□□□□□ -1.64
CDHR3-213ENST00000488386 KRT74Q7RTS7 529 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms