RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 YLPM1P49750 1951 aaKnown RBP0.6□□□□□ -2.31
SMC4-219ENST00000487747 CD300LBA8K4G0 201 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 CENPXA8MT69 81 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 TCAPO15273 167 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 RNF113AO15541 343 aaKnown RBP0.6□□□□□ -2.31
SMC4-219ENST00000487747 AKR7A2O43488 359 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 COX7A2P2O60397 106 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 ALOX12BO75342 701 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 PSIP1O75475 530 aaKnown RBP0.6□□□□□ -2.31
SMC4-219ENST00000487747 SOX14O95416 240 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 CECR9P0C854 216 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 GTF2F2P13984 249 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 TUBG1P23258 451 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 HTR2CP28335 458 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 RPL31P62899 125 aaKnown RBP0.6□□□□□ -2.31
SMC4-219ENST00000487747 PSG4Q00888 419 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 CST6Q15828 149 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 CEACAM16Q2WEN9 425 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 SYT6Q5T7P8 510 aaPredicted RBP0.6□□□□□ -2.31
SMC4-219ENST00000487747 PIP5KL1Q5T9C9 394 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 THOC7Q6I9Y2 204 aaKnown RBP0.6□□□□□ -2.31
SMC4-219ENST00000487747 TCF23Q7RTU1 214 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 OR2V1Q8NHB1 315 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 CCL17Q92583 94 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 TFGQ92734 400 aaPredicted RBP0.6□□□□□ -2.31
SMC4-219ENST00000487747 CERS2Q96G23 380 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 QKIQ96PU8 341 aaKnown RBP eCLIP0.6□□□□□ -2.317e-7■■■■■ 232.7
SMC4-219ENST00000487747 B9D2Q9BPU9 175 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 TTTY12Q9BZ98 90 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 PORCNQ9H237 461 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 CXCL16Q9H2A7 254 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 TUBG2Q9NRH3 451 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 RBM12B-AS1Q9P1G2 102 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 PEF1Q9UBV8 284 aaKnown RBP0.6□□□□□ -2.31
SMC4-219ENST00000487747 NAGKQ9UJ70 344 aa0.6□□□□□ -2.31
SMC4-219ENST00000487747 TRBV24-1A0A075B6N3 115 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 A0A1B0GTQ1 180 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 C17orf98A8MV24 154 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 H7C2Y5 167 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 ZNF593O00488 134 aaPredicted RBP0.59□□□□□ -2.31
SMC4-219ENST00000487747 UPK2O00526 184 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 GATCO43716 136 aaKnown RBP0.59□□□□□ -2.31
SMC4-219ENST00000487747 TAC1P20366 129 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 CRABP2P29373 138 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 CCT6AP40227 531 aaKnown RBP0.59□□□□□ -2.31
SMC4-219ENST00000487747 TAS2R60P59551 318 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 GBE1Q04446 702 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 TNXAQ16473 311 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 ATP6V1FQ16864 119 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 SPIN4Q56A73 249 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 ZNF773Q6PK81 442 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 ASCL4Q6XD76 172 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 TPGS1Q6ZTW0 290 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 MARCH3Q86UD3 253 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 NELFCDQ8IXH7 590 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 MSRB3Q8IXL7 192 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 CA13Q8N1Q1 262 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 GAPTQ8N292 157 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 OR51A7Q8NH64 312 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 TCP10LQ8TDR4 215 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 LMX1AQ8TE12 382 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 IL22Q9GZX6 179 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 C12orf4Q9NQ89 552 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 CYB5R1Q9UHQ9 305 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 ANXA10Q9UJ72 324 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 AP3M1Q9Y2T2 418 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 HSPE1-MOB4S4R3N1 261 aa0.59□□□□□ -2.31
SMC4-219ENST00000487747 ADAMTSL3P82987 1691 aa0.59□□□□□ -2.32
SMC4-219ENST00000487747 TRPM6Q9BX84 2022 aa0.59□□□□□ -2.32
SMC4-219ENST00000487747 POLR3AO14802 1390 aaPredicted RBP0.58□□□□□ -2.32
SMC4-219ENST00000487747 NEURL4Q96JN8 1562 aa0.58□□□□□ -2.32
SMC4-219ENST00000487747 ATRNO75882 1429 aa0.58□□□□□ -2.32
SMC4-219ENST00000487747 A0A1B0GXF2 115 aa0.58□□□□□ -2.32
SMC4-219ENST00000487747 SLC5A10A0PJK1 596 aa0.58□□□□□ -2.32
SMC4-219ENST00000487747 ANKRD20A5PA0PJZ0 165 aa0.58□□□□□ -2.32
SMC4-219ENST00000487747 A6NED7 52 aa0.58□□□□□ -2.32
SMC4-219ENST00000487747 KNCNA6PVL3 124 aa0.58□□□□□ -2.32
SMC4-219ENST00000487747 ODF3BA8MYP8 253 aa0.58□□□□□ -2.32
SMC4-219ENST00000487747 LECT2O14960 151 aa0.58□□□□□ -2.32
SMC4-219ENST00000487747 SH2D1AO60880 128 aa0.58□□□□□ -2.32
SMC4-219ENST00000487747 RLN2P04090 185 aa0.58□□□□□ -2.32
SMC4-219ENST00000487747 PRB4P10163 310 aaPredicted RBP0.58□□□□□ -2.32
SMC4-219ENST00000487747 GABRA1P14867 456 aa0.58□□□□□ -2.32
SMC4-219ENST00000487747 CD9P21926 228 aa0.58□□□□□ -2.32
SMC4-219ENST00000487747 PSMB9P28065 219 aa0.58□□□□□ -2.32
SMC4-219ENST00000487747 ELK4P28324 431 aa0.58□□□□□ -2.32
SMC4-219ENST00000487747 BLVRBP30043 206 aaPredicted RBP0.58□□□□□ -2.32
SMC4-219ENST00000487747 PSMD4P55036 377 aaKnown RBP0.58□□□□□ -2.32
SMC4-219ENST00000487747 PSMC5P62195 406 aa0.58□□□□□ -2.32
SMC4-219ENST00000487747 DYNC1I2Q13409 638 aaKnown RBP0.58□□□□□ -2.32
SMC4-219ENST00000487747 HIKESHIQ53FT3 197 aa0.58□□□□□ -2.32
SMC4-219ENST00000487747 TTMPQ5BVD1 217 aa0.58□□□□□ -2.32
SMC4-219ENST00000487747 UBE2NLQ5JXB2 153 aa0.58□□□□□ -2.32
SMC4-219ENST00000487747 C10orf91Q5T1B1 145 aa0.58□□□□□ -2.32
SMC4-219ENST00000487747 NOXRED1Q6NXP6 359 aa0.58□□□□□ -2.32
SMC4-219ENST00000487747 ERICH5Q6P6B1 374 aa0.58□□□□□ -2.32
SMC4-219ENST00000487747 C16orf87Q6PH81 154 aa0.58□□□□□ -2.32
SMC4-219ENST00000487747 SCXQ7RTU7 201 aa0.58□□□□□ -2.32
SMC4-219ENST00000487747 GALNT10Q86SR1 603 aa0.58□□□□□ -2.32
SMC4-219ENST00000487747 OR4K13Q8NH42 304 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 204.9 ms