RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 NAV2Q8IVL1 2488 aa14.66□□□□□ -0.06
CHMP3-207ENST00000485465 NKX6-3A6NJ46 265 aa14.66□□□□□ -0.06
CHMP3-207ENST00000485465 CEACAM18A8MTB9 384 aa14.66□□□□□ -0.06
CHMP3-207ENST00000485465 CTDSP2O14595 271 aa14.66□□□□□ -0.06
CHMP3-207ENST00000485465 HPGDSO60760 199 aa14.66□□□□□ -0.06
CHMP3-207ENST00000485465 OR7C1O76099 320 aaPredicted RBP14.66□□□□□ -0.06
CHMP3-207ENST00000485465 ZNF44P15621 663 aa14.66□□□□□ -0.06
CHMP3-207ENST00000485465 SLC25A16P16260 332 aa14.66□□□□□ -0.06
CHMP3-207ENST00000485465 LMO1P25800 156 aa14.66□□□□□ -0.06
CHMP3-207ENST00000485465 PITPNBP48739 271 aa14.66□□□□□ -0.06
CHMP3-207ENST00000485465 VEGFCP49767 419 aa14.66□□□□□ -0.06
CHMP3-207ENST00000485465 COL10A1Q03692 680 aa14.66□□□□□ -0.06
CHMP3-207ENST00000485465 CMTM4Q8IZR5 234 aa14.66□□□□□ -0.06
CHMP3-207ENST00000485465 CHST4Q8NCG5 386 aa14.66□□□□□ -0.06
CHMP3-207ENST00000485465 OR56B1Q8NGI3 324 aa14.66□□□□□ -0.06
CHMP3-207ENST00000485465 C6orf62Q9GZU0 229 aaPredicted RBP14.66□□□□□ -0.06
CHMP3-207ENST00000485465 ABCG5Q9H222 651 aa14.66□□□□□ -0.06
CHMP3-207ENST00000485465 MMP27Q9H306 513 aa14.66□□□□□ -0.06
CHMP3-207ENST00000485465 NARFLQ9H6Q4 476 aa14.66□□□□□ -0.06
CHMP3-207ENST00000485465 KAAG1Q9UBP8 84 aa14.66□□□□□ -0.06
CHMP3-207ENST00000485465 SIRPB1O00241 398 aa14.65□□□□□ -0.06
CHMP3-207ENST00000485465 SIGLEC5O15389 551 aa14.65□□□□□ -0.06
CHMP3-207ENST00000485465 TMPRSS2O15393 492 aa14.65□□□□□ -0.06
CHMP3-207ENST00000485465 SOCS1O15524 211 aa14.65□□□□□ -0.06
CHMP3-207ENST00000485465 RGS5O15539 181 aa14.65□□□□□ -0.06
CHMP3-207ENST00000485465 ADAM20O43506 726 aa14.65□□□□□ -0.06
CHMP3-207ENST00000485465 APOA1P02647 267 aa14.65□□□□□ -0.06
CHMP3-207ENST00000485465 SIGIRRQ6IA17 410 aa14.65□□□□□ -0.06
CHMP3-207ENST00000485465 SLC36A1Q7Z2H8 476 aa14.65□□□□□ -0.06
CHMP3-207ENST00000485465 ZNF561Q8N587 486 aa14.65□□□□□ -0.06
CHMP3-207ENST00000485465 FAM216BQ8N7L0 139 aa14.65□□□□□ -0.06
CHMP3-207ENST00000485465 RAB40AQ8WXH6 277 aa14.65□□□□□ -0.06
CHMP3-207ENST00000485465 MED30Q96HR3 178 aa14.65□□□□□ -0.06
CHMP3-207ENST00000485465 MIXL1Q9H2W2 232 aa14.65□□□□□ -0.06
CHMP3-207ENST00000485465 MIOXQ9UGB7 285 aa14.65□□□□□ -0.06
CHMP3-207ENST00000485465 PCDHB10Q9UN67 800 aa14.65□□□□□ -0.06
CHMP3-207ENST00000485465 MAB21L2Q9Y586 359 aa14.65□□□□□ -0.06
CHMP3-207ENST00000485465 TRAV24A0A0B4J272 114 aa14.64□□□□□ -0.07
CHMP3-207ENST00000485465 A0A1B0GW55 424 aa14.64□□□□□ -0.07
CHMP3-207ENST00000485465 TMEM82A0PJX8 343 aa14.64□□□□□ -0.07
CHMP3-207ENST00000485465 FOXI3A8MTJ6 420 aaPredicted RBP14.64□□□□□ -0.07
CHMP3-207ENST00000485465 H3BUI4 141 aa14.64□□□□□ -0.07
CHMP3-207ENST00000485465 RAB27BO00194 218 aa14.64□□□□□ -0.07
CHMP3-207ENST00000485465 SLC33A1O00400 549 aaPredicted RBP14.64□□□□□ -0.07
CHMP3-207ENST00000485465 PDCD6O75340 191 aa14.64□□□□□ -0.07
CHMP3-207ENST00000485465 EIF4EP06730 217 aaKnown RBP14.64□□□□□ -0.07
CHMP3-207ENST00000485465 WNT2P09544 360 aa14.64□□□□□ -0.07
CHMP3-207ENST00000485465 DUX4L2P0CJ85 424 aa14.64□□□□□ -0.07
CHMP3-207ENST00000485465 DUX4L3P0CJ86 424 aa14.64□□□□□ -0.07
CHMP3-207ENST00000485465 DUX4L4P0CJ87 422 aa14.64□□□□□ -0.07
CHMP3-207ENST00000485465 DUX4L5P0CJ88 424 aa14.64□□□□□ -0.07
CHMP3-207ENST00000485465 DUX4L6P0CJ89 424 aa14.64□□□□□ -0.07
CHMP3-207ENST00000485465 DUX4L7P0CJ90 424 aa14.64□□□□□ -0.07
CHMP3-207ENST00000485465 ELK1P19419 428 aa14.64□□□□□ -0.07
CHMP3-207ENST00000485465 FUT3P21217 361 aa14.64□□□□□ -0.07
CHMP3-207ENST00000485465 BLVRBP30043 206 aaPredicted RBP14.64□□□□□ -0.07
CHMP3-207ENST00000485465 IL13RA1P78552 427 aa14.64□□□□□ -0.07
CHMP3-207ENST00000485465 MOGAT2Q3SYC2 334 aa14.64□□□□□ -0.07
CHMP3-207ENST00000485465 ATAD3CQ5T2N8 411 aa14.64□□□□□ -0.07
CHMP3-207ENST00000485465 DUX4L9Q6RFH8 374 aaPredicted RBP14.64□□□□□ -0.07
CHMP3-207ENST00000485465 ZNRF1Q8ND25 227 aa14.64□□□□□ -0.07
CHMP3-207ENST00000485465 OR10R2Q8NGX6 335 aa14.64□□□□□ -0.07
CHMP3-207ENST00000485465 CLDND2Q8NHS1 167 aa14.64□□□□□ -0.07
CHMP3-207ENST00000485465 S100A16Q96FQ6 103 aaKnown RBP14.64□□□□□ -0.07
CHMP3-207ENST00000485465 NEDD4LQ96PU5 975 aa14.64□□□□□ -0.07
CHMP3-207ENST00000485465 PATZ1Q9HBE1 687 aaKnown RBP14.64□□□□□ -0.07
CHMP3-207ENST00000485465 SPACA1Q9HBV2 294 aa14.64□□□□□ -0.07
CHMP3-207ENST00000485465 RCC2Q9P258 522 aaKnown RBP14.64□□□□□ -0.07
CHMP3-207ENST00000485465 CTSZQ9UBR2 303 aa14.64□□□□□ -0.07
CHMP3-207ENST00000485465 DUX4Q9UBX2 424 aa14.64□□□□□ -0.07
CHMP3-207ENST00000485465 ARID1AO14497 2285 aa14.63□□□□□ -0.07
CHMP3-207ENST00000485465 A0A0A6YYH2 397 aa14.63□□□□□ -0.07
CHMP3-207ENST00000485465 IGHV4-61A0A0C4DH41 118 aa14.63□□□□□ -0.07
CHMP3-207ENST00000485465 A6NJ64 397 aa14.63□□□□□ -0.07
CHMP3-207ENST00000485465 F5H0A9 414 aaPredicted RBP14.63□□□□□ -0.07
CHMP3-207ENST00000485465 PSPNO60542 156 aa14.63□□□□□ -0.07
CHMP3-207ENST00000485465 ZNF737O75373 536 aa14.63□□□□□ -0.07
CHMP3-207ENST00000485465 SCGNO76038 276 aa14.63□□□□□ -0.07
CHMP3-207ENST00000485465 SELLP14151 372 aa14.63□□□□□ -0.07
CHMP3-207ENST00000485465 RPS2P15880 293 aaKnown RBP14.63□□□□□ -0.07
CHMP3-207ENST00000485465 CHATP28329 748 aa14.63□□□□□ -0.07
CHMP3-207ENST00000485465 TMEM50BP56557 158 aa14.63□□□□□ -0.07
CHMP3-207ENST00000485465 RAB12Q6IQ22 244 aa14.63□□□□□ -0.07
CHMP3-207ENST00000485465 C17orf107Q6ZR85 190 aa14.63□□□□□ -0.07
CHMP3-207ENST00000485465 LAX1Q8IWV1 398 aa14.63□□□□□ -0.07
CHMP3-207ENST00000485465 ASCC1Q8N9N2 400 aaKnown RBP14.63□□□□□ -0.07
CHMP3-207ENST00000485465 SUMF2Q8NBJ7 301 aa14.63□□□□□ -0.07
CHMP3-207ENST00000485465 PHF21AQ96BD5 680 aa14.63□□□□□ -0.07
CHMP3-207ENST00000485465 NEIL1Q96FI4 390 aaPredicted RBP14.63□□□□□ -0.07
CHMP3-207ENST00000485465 SNX22Q96L94 193 aa14.63□□□□□ -0.07
CHMP3-207ENST00000485465 Q96MF0 132 aa14.63□□□□□ -0.07
CHMP3-207ENST00000485465 DPCDQ9BVM2 203 aaPredicted RBP14.63□□□□□ -0.07
CHMP3-207ENST00000485465 DIABLOQ9NR28 239 aa14.63□□□□□ -0.07
CHMP3-207ENST00000485465 PTTG2Q9NZH5 202 aa14.63□□□□□ -0.07
CHMP3-207ENST00000485465 ADAM30Q9UKF2 790 aa14.63□□□□□ -0.07
CHMP3-207ENST00000485465 PEX16Q9Y5Y5 336 aa14.63□□□□□ -0.07
CHMP3-207ENST00000485465 FAM25AB3EWG3 89 aa14.62□□□□□ -0.07
CHMP3-207ENST00000485465 FAM25CB3EWG5 89 aa14.62□□□□□ -0.07
CHMP3-207ENST00000485465 FAM25GB3EWG6 89 aa14.62□□□□□ -0.07
CHMP3-207ENST00000485465 K7N7A8 449 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms