RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	MAGEB3	O15480	346 aa		11.21	□□□□□ -0.61
HDAC7-222	ENST00000477937	TSPAN9	O75954	239 aa		11.21	□□□□□ -0.61
HDAC7-222	ENST00000477937	OR2H2	O95918	312 aa		11.21	□□□□□ -0.61
HDAC7-222	ENST00000477937	ARG1	P05089	322 aa		11.21	□□□□□ -0.61
HDAC7-222	ENST00000477937	IGHV1-8	P0DP01	117 aa		11.21	□□□□□ -0.61
HDAC7-222	ENST00000477937	MYL12A	P19105	171 aa		11.21	□□□□□ -0.61
HDAC7-222	ENST00000477937	ERP29	P30040	261 aa	Known RBP	11.21	□□□□□ -0.61
HDAC7-222	ENST00000477937	ETV1	P50549	477 aa		11.21	□□□□□ -0.61
HDAC7-222	ENST00000477937	SRSF4	Q08170	494 aa	Known RBP	11.21	□□□□□ -0.61
HDAC7-222	ENST00000477937	RCN1	Q15293	331 aa		11.21	□□□□□ -0.61
HDAC7-222	ENST00000477937	RPL22L1	Q6P5R6	122 aa	Known RBP	11.21	□□□□□ -0.61
HDAC7-222	ENST00000477937	RNF144B	Q7Z419	303 aa		11.21	□□□□□ -0.61
HDAC7-222	ENST00000477937	TPRX1	Q8N7U7	411 aa		11.21	□□□□□ -0.61
HDAC7-222	ENST00000477937	OR4S1	Q8NGB4	309 aa		11.21	□□□□□ -0.61
HDAC7-222	ENST00000477937	CPNE2	Q96FN4	548 aa	Predicted RBP	11.21	□□□□□ -0.61
HDAC7-222	ENST00000477937	CITED1	Q99966	193 aa		11.21	□□□□□ -0.61
HDAC7-222	ENST00000477937	PPA2	Q9H2U2	334 aa		11.21	□□□□□ -0.61
HDAC7-222	ENST00000477937	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.21	□□□□□ -0.61
HDAC7-222	ENST00000477937	TBL2	Q9Y4P3	447 aa	Known RBP	11.21	□□□□□ -0.61
HDAC7-222	ENST00000477937	FAM90A8P	A6NJQ4	464 aa		11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	CLPX	O76031	633 aa		11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	CD2	P06729	351 aa		11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	ZNF44	P15621	663 aa		11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	RAB3A	P20336	220 aa		11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	LMO1	P25800	156 aa		11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	OR3A1	P47881	315 aa		11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	SOX2	P48431	317 aa		11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	PROK1	P58294	105 aa		11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	ZP1	P60852	638 aa		11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	ADARB1	P78563	741 aa	Known RBP	11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	SCN1B	Q07699	218 aa		11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	MED21	Q13503	144 aa		11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	CDK5R1	Q15078	307 aa		11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	LY6E	Q16553	131 aa		11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	CRIP3	Q6Q6R5	217 aa		11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	TREML4	Q6UXN2	200 aa		11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	LHFPL4	Q7Z7J7	247 aa		11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	TRAPPC6B	Q86SZ2	158 aa		11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	OR11H6	Q8NGC7	330 aa		11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	GPR148	Q8TDV2	347 aa		11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	FOXRED1	Q96CU9	486 aa	Predicted RBP	11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	MALSU1	Q96EH3	234 aa		11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	GPER1	Q99527	375 aa		11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	RAB18	Q9NP72	206 aa		11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	CHCHD3	Q9NX63	227 aa	Known RBP	11.2	□□□□□ -0.62
HDAC7-222	ENST00000477937	ODF3B	A8MYP8	253 aa		11.19	□□□□□ -0.62
HDAC7-222	ENST00000477937	PAX6	P26367	422 aa		11.19	□□□□□ -0.62
HDAC7-222	ENST00000477937	P2RX3	P56373	397 aa		11.19	□□□□□ -0.62
HDAC7-222	ENST00000477937	DYNC1I2	Q13409	638 aa	Known RBP	11.19	□□□□□ -0.62
HDAC7-222	ENST00000477937	IL18R1	Q13478	541 aa		11.19	□□□□□ -0.62
HDAC7-222	ENST00000477937	OR2G6	Q5TZ20	316 aa		11.19	□□□□□ -0.62
HDAC7-222	ENST00000477937	ZNF626	Q68DY1	528 aa		11.19	□□□□□ -0.62
HDAC7-222	ENST00000477937	XAF1	Q6GPH4	301 aa		11.19	□□□□□ -0.62
HDAC7-222	ENST00000477937	SLC35E4	Q6ICL7	350 aa		11.19	□□□□□ -0.62
HDAC7-222	ENST00000477937	TCF23	Q7RTU1	214 aa		11.19	□□□□□ -0.62
HDAC7-222	ENST00000477937	SATL1	Q86VE3	508 aa		11.19	□□□□□ -0.62
HDAC7-222	ENST00000477937	CHST4	Q8NCG5	386 aa		11.19	□□□□□ -0.62
HDAC7-222	ENST00000477937	TMEM80	Q96HE8	168 aa		11.19	□□□□□ -0.62
HDAC7-222	ENST00000477937	BABAM2	Q9NXR7	383 aa		11.19	□□□□□ -0.62
HDAC7-222	ENST00000477937	DIMT1	Q9UNQ2	313 aa	Known RBP	11.19	□□□□□ -0.62
HDAC7-222	ENST00000477937	UBE2J1	Q9Y385	318 aa	Predicted RBP	11.19	□□□□□ -0.62
HDAC7-222	ENST00000477937	SESN1	Q9Y6P5	492 aa		11.19	□□□□□ -0.62
HDAC7-222	ENST00000477937	TRGV10	A0A0A0MS01	117 aa		11.18	□□□□□ -0.62
HDAC7-222	ENST00000477937		A0A0G2JK05	382 aa		11.18	□□□□□ -0.62
HDAC7-222	ENST00000477937	VGLL3	A8MV65	326 aa		11.18	□□□□□ -0.62
HDAC7-222	ENST00000477937	TIMM23	O14925	209 aa		11.18	□□□□□ -0.62
HDAC7-222	ENST00000477937	DEGS1	O15121	323 aa		11.18	□□□□□ -0.62
HDAC7-222	ENST00000477937	OGG1	O15527	345 aa		11.18	□□□□□ -0.62
HDAC7-222	ENST00000477937	GABRA5	P31644	462 aa		11.18	□□□□□ -0.62
HDAC7-222	ENST00000477937	MTNR1B	P49286	362 aa		11.18	□□□□□ -0.62
HDAC7-222	ENST00000477937	KRTAP10-3	P60369	221 aa		11.18	□□□□□ -0.62
HDAC7-222	ENST00000477937	AES	Q08117	197 aa		11.18	□□□□□ -0.62
HDAC7-222	ENST00000477937	SSX2	Q16385	188 aa		11.18	□□□□□ -0.62
HDAC7-222	ENST00000477937	ZNF529	Q6P280	563 aa		11.18	□□□□□ -0.62
HDAC7-222	ENST00000477937		Q6P435	159 aa		11.18	□□□□□ -0.62
HDAC7-222	ENST00000477937	LIAT1	Q6ZQX7	453 aa		11.18	□□□□□ -0.62
HDAC7-222	ENST00000477937	PXT1	Q8NFP0	134 aa		11.18	□□□□□ -0.62
HDAC7-222	ENST00000477937	RPS4Y2	Q8TD47	263 aa		11.18	□□□□□ -0.62
HDAC7-222	ENST00000477937	RGP1	Q92546	391 aa	Predicted RBP	11.18	□□□□□ -0.62
HDAC7-222	ENST00000477937	TMEM133	Q9H2Q1	129 aa		11.18	□□□□□ -0.62
HDAC7-222	ENST00000477937	GAL3ST2	Q9H3Q3	398 aa		11.18	□□□□□ -0.62
HDAC7-222	ENST00000477937	TCF7L1	Q9HCS4	588 aa		11.18	□□□□□ -0.62
HDAC7-222	ENST00000477937	ABCB10	Q9NRK6	738 aa		11.18	□□□□□ -0.62
HDAC7-222	ENST00000477937	TAS2R4	Q9NYW5	299 aa		11.18	□□□□□ -0.62
HDAC7-222	ENST00000477937	FBLN5	Q9UBX5	448 aa		11.18	□□□□□ -0.62
HDAC7-222	ENST00000477937	ZNF281	Q9Y2X9	895 aa		11.18	□□□□□ -0.62
HDAC7-222	ENST00000477937	HSPE1-MOB4	S4R3N1	261 aa		11.18	□□□□□ -0.62
HDAC7-222	ENST00000477937	IGHV2-26	A0A0B4J1V2	119 aa		11.17	□□□□□ -0.62
HDAC7-222	ENST00000477937		M0QZ24	198 aa		11.17	□□□□□ -0.62
HDAC7-222	ENST00000477937	CSN2	P05814	226 aa		11.17	□□□□□ -0.62
HDAC7-222	ENST00000477937	CAPG	P40121	348 aa		11.17	□□□□□ -0.62
HDAC7-222	ENST00000477937	GLIPR1	P48060	266 aa		11.17	□□□□□ -0.62
HDAC7-222	ENST00000477937	ST3GAL4	Q11206	333 aa		11.17	□□□□□ -0.62
HDAC7-222	ENST00000477937	RSU1	Q15404	277 aa		11.17	□□□□□ -0.62
HDAC7-222	ENST00000477937	FAM189A2	Q15884	450 aa		11.17	□□□□□ -0.62
HDAC7-222	ENST00000477937	PLA1A	Q53H76	456 aa		11.17	□□□□□ -0.62
HDAC7-222	ENST00000477937	OGFRL1	Q5TC84	451 aa	Predicted RBP	11.17	□□□□□ -0.62
HDAC7-222	ENST00000477937	MINOS1	Q5TGZ0	78 aa		11.17	□□□□□ -0.62
HDAC7-222	ENST00000477937	ELP2	Q6IA86	826 aa		11.17	□□□□□ -0.62
HDAC7-222	ENST00000477937	ASPHD2	Q6ICH7	369 aa		11.17	□□□□□ -0.62

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