RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 GTF2A1P52655 376 aaPredicted RBP7.66□□□□□ -1.18
PDPN-204ENST00000475043 MEF2CQ06413 473 aaPredicted RBP7.66□□□□□ -1.18
PDPN-204ENST00000475043 MRPL28Q13084 256 aaKnown RBP7.66□□□□□ -1.18
PDPN-204ENST00000475043 ZNF146Q15072 292 aa7.66□□□□□ -1.18
PDPN-204ENST00000475043 LRRC75BQ2VPJ9 315 aa7.66□□□□□ -1.18
PDPN-204ENST00000475043 PLA1AQ53H76 456 aa7.66□□□□□ -1.18
PDPN-204ENST00000475043 SPIN3Q5JUX0 258 aa7.66□□□□□ -1.18
PDPN-204ENST00000475043 LPCAT4Q643R3 524 aa7.66□□□□□ -1.18
PDPN-204ENST00000475043 RNF144BQ7Z419 303 aa7.66□□□□□ -1.18
PDPN-204ENST00000475043 TRAPPC6BQ86SZ2 158 aa7.66□□□□□ -1.18
PDPN-204ENST00000475043 OR52N4Q8NGI2 321 aa7.66□□□□□ -1.18
PDPN-204ENST00000475043 OR13D1Q8NGV5 346 aa7.66□□□□□ -1.18
PDPN-204ENST00000475043 PPP1R35Q8TAP8 253 aa7.66□□□□□ -1.18
PDPN-204ENST00000475043 CNIH3Q8TBE1 160 aa7.66□□□□□ -1.18
PDPN-204ENST00000475043 CYGBQ8WWM9 190 aa7.66□□□□□ -1.18
PDPN-204ENST00000475043 RDH12Q96NR8 316 aa7.66□□□□□ -1.18
PDPN-204ENST00000475043 HMG20AQ9NP66 347 aa7.66□□□□□ -1.18
PDPN-204ENST00000475043 EXOSC4Q9NPD3 245 aaKnown RBP7.66□□□□□ -1.18
PDPN-204ENST00000475043 MRPS18AQ9NVS2 196 aaKnown RBP7.66□□□□□ -1.18
PDPN-204ENST00000475043 IGKV1-12A0A0C4DH73 117 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 MGST3O14880 152 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 MAGEB3O15480 346 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 SULT1B1O43704 296 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 WBP4O75554 376 aaKnown RBP7.65□□□□□ -1.18
PDPN-204ENST00000475043 KDM4BO94953 1096 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 OR2H2O95918 312 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 IGKV1D-12P01611 117 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 RBP4P02753 201 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 MT-ND2P03891 347 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 LIMS3P0CW19 117 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 LIMS4P0CW20 117 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 IGHV1-8P0DP01 117 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 ZNF44P15621 663 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 SOX2P48431 317 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 ETV1P50549 477 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 DLX6P56179 175 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 KISS1Q15726 138 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 ZNF691Q5VV52 312 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 SLC35E4Q6ICL7 350 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 TMPRSS11AQ6ZMR5 421 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 LHFPL4Q7Z7J7 247 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 SATL1Q86VE3 508 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 PARP16Q8N5Y8 322 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 OR4S1Q8NGB4 309 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 HAVCR2Q8TDQ0 301 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 AJUBAQ96IF1 538 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 GPER1Q99527 375 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 CITED1Q99966 193 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 ZNF649Q9BS31 505 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 MEGF9Q9H1U4 602 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 FGF20Q9NP95 211 aaPredicted RBP7.65□□□□□ -1.18
PDPN-204ENST00000475043 ING3Q9NXR8 418 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 LINC00312Q9Y6C7 94 aa7.65□□□□□ -1.18
PDPN-204ENST00000475043 NBEAL1Q6ZS30 2694 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 IRGMA1A4Y4 181 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 TIMM23O14925 209 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 TSPAN9O75954 239 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 CLPXO76031 633 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 CD2P06729 351 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 MYL12AP19105 171 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 RAB3AP20336 220 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 DCKP27707 260 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 OR3A1P47881 315 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 RAB13P51153 203 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 P2RX3P56373 397 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 PROK1P58294 105 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 KRTAP10-3P60369 221 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 IL18R1Q13478 541 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 RCN1Q15293 331 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 FAM189A2Q15884 450 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 SSX2Q16385 188 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 OR2G6Q5TZ20 316 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 TTC23Q5W5X9 447 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 XAF1Q6GPH4 301 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 RPL22L1Q6P5R6 122 aaKnown RBP7.64□□□□□ -1.19
PDPN-204ENST00000475043 TCF23Q7RTU1 214 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 SAXO1Q8IYX7 474 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 DHRSXQ8N5I4 330 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 SETD9Q8NE22 299 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 GPR148Q8TDV2 347 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 FOXRED1Q96CU9 486 aaPredicted RBP7.64□□□□□ -1.19
PDPN-204ENST00000475043 CPNE2Q96FN4 548 aaPredicted RBP7.64□□□□□ -1.19
PDPN-204ENST00000475043 NR1H4Q96RI1 486 aaPredicted RBP7.64□□□□□ -1.19
PDPN-204ENST00000475043 NKX3-1Q99801 234 aaPredicted RBP7.64□□□□□ -1.19
PDPN-204ENST00000475043 FAM192AQ9GZU8 254 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 C16orf95Q9H693 158 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 SEBOXQ9HB31 216 aaPredicted RBP7.64□□□□□ -1.19
PDPN-204ENST00000475043 RHOFQ9HBH0 211 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 TCF7L1Q9HCS4 588 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 RAB18Q9NP72 206 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 ABCB10Q9NRK6 738 aa7.64□□□□□ -1.19
PDPN-204ENST00000475043 CHCHD3Q9NX63 227 aaKnown RBP7.64□□□□□ -1.19
PDPN-204ENST00000475043 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.64□□□□□ -1.19
PDPN-204ENST00000475043 TBL2Q9Y4P3 447 aaKnown RBP7.64□□□□□ -1.19
PDPN-204ENST00000475043 TRGV10A0A0A0MS01 117 aa7.63□□□□□ -1.19
PDPN-204ENST00000475043 A0A0G2JK05 382 aa7.63□□□□□ -1.19
PDPN-204ENST00000475043 FUOMA2VDF0 154 aa7.63□□□□□ -1.19
PDPN-204ENST00000475043 FAM90A8PA6NJQ4 464 aa7.63□□□□□ -1.19
PDPN-204ENST00000475043 M0QZ24 198 aa7.63□□□□□ -1.19
PDPN-204ENST00000475043 HSPB6O14558 160 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms