RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 FAM90A23PA8MXZ1 464 aa14.69□□□□□ -0.06
RPL39-202ENST00000468844 TMEM178BH3BS89 294 aa14.69□□□□□ -0.06
RPL39-202ENST00000468844 FAM90A15PP0C7V4 464 aa14.69□□□□□ -0.06
RPL39-202ENST00000468844 FAM90A13PP0C7W8 464 aa14.69□□□□□ -0.06
RPL39-202ENST00000468844 FAM90A14PP0C7W9 464 aa14.69□□□□□ -0.06
RPL39-202ENST00000468844 FAM90A24PP0C7X0 464 aa14.69□□□□□ -0.06
RPL39-202ENST00000468844 COL8A2P25067 703 aa14.69□□□□□ -0.06
RPL39-202ENST00000468844 CD80P33681 288 aa14.69□□□□□ -0.06
RPL39-202ENST00000468844 NR4A2P43354 598 aa14.69□□□□□ -0.06
RPL39-202ENST00000468844 IL13RA2Q14627 380 aa14.69□□□□□ -0.06
RPL39-202ENST00000468844 SPIN3Q5JUX0 258 aa14.69□□□□□ -0.06
RPL39-202ENST00000468844 NEU4Q8WWR8 484 aaPredicted RBP14.69□□□□□ -0.06
RPL39-202ENST00000468844 YIPF5Q969M3 257 aa14.69□□□□□ -0.06
RPL39-202ENST00000468844 RAB3CQ96E17 227 aa14.69□□□□□ -0.06
RPL39-202ENST00000468844 SDHCQ99643 169 aaPredicted RBP14.69□□□□□ -0.06
RPL39-202ENST00000468844 CCDC32Q9BV29 185 aa14.69□□□□□ -0.06
RPL39-202ENST00000468844 SRRQ9GZT4 340 aa14.69□□□□□ -0.06
RPL39-202ENST00000468844 RASL12Q9NYN1 266 aa14.69□□□□□ -0.06
RPL39-202ENST00000468844 ELF5Q9UKW6 265 aaPredicted RBP14.69□□□□□ -0.06
RPL39-202ENST00000468844 KCNK7Q9Y2U2 307 aa14.69□□□□□ -0.06
RPL39-202ENST00000468844 MED13LQ71F56 2210 aa14.69□□□□□ -0.06
RPL39-202ENST00000468844 SPNP16150 400 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 GNB3P16520 340 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 MNDAP41218 407 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 CEBPDP49716 269 aaPredicted RBP14.68□□□□□ -0.06
RPL39-202ENST00000468844 DEFA1P59665 94 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 DEFA3P59666 94 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 IKZF1Q13422 519 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 MPV17LQ2QL34 196 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 HFEQ30201 348 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 PYHIN1Q6K0P9 492 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 Q6ZTK2 550 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 C6orf201Q7Z4U5 140 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 LINC00596Q86U02 117 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 CHST4Q8NCG5 386 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 POM121Q96HA1 1249 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 OR14J1Q9UGF5 321 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 IGHV3OR15-7A0A075B7D8 119 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 PTBP1P26599 531 aaKnown RBP eCLIP14.68□□□□□ -0.062e-39■□□□□ 9.1
RPL39-202ENST00000468844 CHATP28329 748 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 KRTAP10-9P60411 292 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 ZNF260Q3ZCT1 412 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 NKAPLQ5M9Q1 402 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 OLFML2AQ68BL7 652 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 ZNF787Q6DD87 383 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 Q6P435 159 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 FIP1L1Q6UN15 594 aaKnown RBP14.68□□□□□ -0.06
RPL39-202ENST00000468844 BAIAP2L2Q6UXY1 529 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 C1orf87Q8N0U7 546 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 OR5T2Q8NGG2 359 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 RCC2Q9P258 522 aaKnown RBP14.68□□□□□ -0.06
RPL39-202ENST00000468844 NLKQ9UBE8 527 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 DNAJB11Q9UBS4 358 aa14.68□□□□□ -0.06
RPL39-202ENST00000468844 CCDC168Q8NDH2 2452 aa14.67□□□□□ -0.06
RPL39-202ENST00000468844 PDZD2O15018 2839 aa14.67□□□□□ -0.06
RPL39-202ENST00000468844 TMEM235A6NFC5 223 aa14.67□□□□□ -0.06
RPL39-202ENST00000468844 RFPL4AA6NLU0 287 aa14.67□□□□□ -0.06
RPL39-202ENST00000468844 OR2AT4A6NND4 320 aa14.67□□□□□ -0.06
RPL39-202ENST00000468844 RFPL4AL1F8VTS6 287 aa14.67□□□□□ -0.06
RPL39-202ENST00000468844 MFNGO00587 321 aa14.67□□□□□ -0.06
RPL39-202ENST00000468844 RP2O75695 350 aa14.67□□□□□ -0.06
RPL39-202ENST00000468844 KNG1P01042 644 aa14.67□□□□□ -0.06
RPL39-202ENST00000468844 TFF1P04155 84 aa14.67□□□□□ -0.06
RPL39-202ENST00000468844 PSG2P11465 335 aa14.67□□□□□ -0.06
RPL39-202ENST00000468844 HIST1H1DP16402 221 aaKnown RBP14.67□□□□□ -0.06
RPL39-202ENST00000468844 SSTR2P30874 369 aa14.67□□□□□ -0.06
RPL39-202ENST00000468844 SCN1BQ07699 218 aa14.67□□□□□ -0.06
RPL39-202ENST00000468844 BRICD5Q6PL45 260 aa14.67□□□□□ -0.06
RPL39-202ENST00000468844 GDPD3Q7L5L3 318 aa14.67□□□□□ -0.06
RPL39-202ENST00000468844 FAM90A1Q86YD7 464 aa14.67□□□□□ -0.06
RPL39-202ENST00000468844 AUNIPQ9H7T9 357 aa14.67□□□□□ -0.06
RPL39-202ENST00000468844 IGKV1D-17A0A075B6S4 117 aa14.66□□□□□ -0.06
RPL39-202ENST00000468844 MEIOCA2RUB1 952 aa14.66□□□□□ -0.06
RPL39-202ENST00000468844 PDCD6O75340 191 aa14.66□□□□□ -0.06
RPL39-202ENST00000468844 OR2H2O95918 312 aa14.66□□□□□ -0.06
RPL39-202ENST00000468844 HAND1O96004 215 aa14.66□□□□□ -0.06
RPL39-202ENST00000468844 DAOP14920 347 aa14.66□□□□□ -0.06
RPL39-202ENST00000468844 ZNF44P15621 663 aa14.66□□□□□ -0.06
RPL39-202ENST00000468844 CDNFQ49AH0 187 aa14.66□□□□□ -0.06
RPL39-202ENST00000468844 ATAD3CQ5T2N8 411 aa14.66□□□□□ -0.06
RPL39-202ENST00000468844 TEX36Q5VZQ5 186 aa14.66□□□□□ -0.06
RPL39-202ENST00000468844 ST8SIA4Q92187 359 aa14.66□□□□□ -0.06
RPL39-202ENST00000468844 RDH5Q92781 318 aa14.66□□□□□ -0.06
RPL39-202ENST00000468844 PECRQ9BY49 303 aa14.66□□□□□ -0.06
RPL39-202ENST00000468844 IFT22Q9H7X7 185 aa14.66□□□□□ -0.06
RPL39-202ENST00000468844 PLEKHJ1Q9NW61 149 aa14.66□□□□□ -0.06
RPL39-202ENST00000468844 HSF4Q9ULV5 492 aa14.66□□□□□ -0.06
RPL39-202ENST00000468844 YLPM1P49750 1951 aaKnown RBP14.66□□□□□ -0.06
RPL39-202ENST00000468844 TRAV24A0A0B4J272 114 aa14.66□□□□□ -0.06
RPL39-202ENST00000468844 OOEPA6NGQ2 149 aa14.66□□□□□ -0.06
RPL39-202ENST00000468844 IFNL4K9M1U5 179 aa14.66□□□□□ -0.06
RPL39-202ENST00000468844 TPPPO94811 219 aa14.66□□□□□ -0.06
RPL39-202ENST00000468844 F12P00748 615 aaPredicted RBP14.66□□□□□ -0.06
RPL39-202ENST00000468844 MRPS11P82912 194 aaKnown RBP14.66□□□□□ -0.06
RPL39-202ENST00000468844 MICBQ29980 383 aa14.66□□□□□ -0.06
RPL39-202ENST00000468844 PYDC2Q56P42 97 aa14.66□□□□□ -0.06
RPL39-202ENST00000468844 CCBE1Q6UXH8 406 aaPredicted RBP14.66□□□□□ -0.06
RPL39-202ENST00000468844 Q8N402 240 aa14.66□□□□□ -0.06
RPL39-202ENST00000468844 ANGPTL6Q8NI99 470 aa14.66□□□□□ -0.06
RPL39-202ENST00000468844 NEDD4LQ96PU5 975 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms